Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8032P24.3 | 
| Conread position: | 358-509 | 
| Cow position: | chr3:8523131-8522980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 78, 37 | 
| Conread position: | 359-495 | 
| Cow position: | chr3:59610694-59610560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 359-496 | 
| Cow position: | chr3:74079613-74079478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 359-496 | 
| Cow position: | chr3:78077209-78077350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 21, 74 | 
| Conread position: | 359-497 | 
| Cow position: | chr3:52845580-52845716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 359-502 | 
| Cow position: | chr3:64196850-64196991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 359-509 | 
| Cow position: | chr3:48363096-48363243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 142, 60 | 
| Conread position: | 359-509 | 
| Cow position: | chr3:52608206-52608351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 359-515 | 
| Cow position: | chr3:23132145-23131988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 140, 0 | 
| Conread position: | 359-518 | 
| Cow position: | chr3:53222037-53222197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 139, 63 | 
| Conread position: | 359-521 | 
| Cow position: | chr3:10958216-10958058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 142, 62 | 
| Conread position: | 359-521 | 
| Cow position: | chr3:68616306-68616150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 359-521 | 
| Cow position: | chr3:75107798-75107959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 142, 61 | 
| Conread position: | 359-523 | 
| Cow position: | chr3:17531714-17531550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 62, 140 | 
| Conread position: | 359-525 | 
| Cow position: | chr3:68004678-68004521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 359-527 | 
| Cow position: | chr3:69785600-69785428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 359-528 | 
| Cow position: | chr3:4071747-4071577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 77, 33 | 
| Conread position: | 359-529 | 
| Cow position: | chr3:82425055-82424884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 148, 83 | 
| Conread position: | 359-530 | 
| Cow position: | chr3:22924351-22924187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 359-530 | 
| Cow position: | chr3:32248035-32248208 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 51, 40 | 
| Conread position: | 359-530 | 
| Cow position: | chr3:49363133-49363303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 142, 62 | 
| Conread position: | 359-530 | 
| Cow position: | chr3:59604867-59605038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 142, 63 | 
| Conread position: | 359-531 | 
| Cow position: | chr3:39969838-39969667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 140, 63 | 
| Conread position: | 359-541 | 
| Cow position: | chr3:22165392-22165211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 142, 172 | 
| Conread position: | 359-545 | 
| Cow position: | chr3:49344717-49344908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 359-546 | 
| Cow position: | chr3:19585887-19586075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 142, 171 | 
| Conread position: | 360-509 | 
| Cow position: | chr3:2636974-2637119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 141, 60 | 
| Conread position: | 360-524 | 
| Cow position: | chr3:50768704-50768872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 139, 62 | 
| Conread position: | 361-531 | 
| Cow position: | chr3:53428891-53428716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 138, 59 | 
| Conread position: | 362-514 | 
| Cow position: | chr3:22676083-22675928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 50, 77 | 
| Conread position: | 364-527 | 
| Cow position: | chr3:27274557-27274720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 137, 58 | 
| Conread position: | 364-537 | 
| Cow position: | chr3:15160549-15160717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 137, 58 | 
| Conread position: | 497-734 | 
| Cow position: | chr3:29413030-29413271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 159, 39 | 
| Conread position: | 505-722 | 
| Cow position: | chr3:562816-562612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 190, 26 | 
| Conread position: | 506-652 | 
| Cow position: | chr3:81547083-81547224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 512-724 | 
| Cow position: | chr3:19641044-19641244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 13, 18 | 
| Conread position: | 516-747 | 
| Cow position: | chr3:55320621-55320390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 12, 25 | 
| Conread position: | 517-728 | 
| Cow position: | chr3:13949570-13949356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 48, 27 | 
| Conread position: | 518-760 | 
| Cow position: | chr3:78945852-78945606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 7, 19 | 
| Conread position: | 521-734 | 
| Cow position: | chr3:16752266-16752066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 7, 24 | 
| Conread position: | 522-720 | 
| Cow position: | chr3:25702347-25702156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 80, 14 | 
| Conread position: | 524-716 | 
| Cow position: | chr3:36914047-36914241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 88, 5 | 
| Conread position: | 524-720 | 
| Cow position: | chr3:28937608-28937408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 78, 12 | 
| Conread position: | 524-721 | 
| Cow position: | chr3:67930186-67929994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 76, 12 | 
| Conread position: | 524-723 | 
| Cow position: | chr3:54782006-54781815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 524-724 | 
| Cow position: | chr3:65413281-65413087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 127, 12 | 
| Conread position: | 524-726 | 
| Cow position: | chr3:61467193-61466989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 123, 12 | 
| Conread position: | 524-728 | 
| Cow position: | chr3:17235214-17235021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 524-729 | 
| Cow position: | chr3:54100729-54100529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 524-732 | 
| Cow position: | chr3:53192295-53192088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 525-722 | 
| Cow position: | chr3:33329815-33330011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 527-657 | 
| Cow position: | chr3:32409211-32409340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 527-708 | 
| Cow position: | chr3:26603553-26603383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 159, 86 | 
| Conread position: | 527-714 | 
| Cow position: | chr3:17222143-17221964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 49, 90 | 
| Conread position: | 527-721 | 
| Cow position: | chr3:23132170-23131992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 527-722 | 
| Cow position: | chr3:64648491-64648688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 527-732 | 
| Cow position: | chr3:5305797-5305990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 527-732 | 
| Cow position: | chr3:24371921-24372140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 92, 17 | 
| Conread position: | 527-732 | 
| Cow position: | chr3:70565739-70565526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 96, 150 | 
| Conread position: | 527-733 | 
| Cow position: | chr3:67994920-67995125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 87, 16 | 
| Conread position: | 527-735 | 
| Cow position: | chr3:76415904-76415693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 119, 78 | 
| Conread position: | 527-735 | 
| Cow position: | chr3:80072128-80072333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 527-740 | 
| Cow position: | chr3:3316816-3316613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 527-743 | 
| Cow position: | chr3:1785246-1785022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 97, 0 | 
| Conread position: | 527-743 | 
| Cow position: | chr3:74802067-74801845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 113, 88 | 
| Conread position: | 528-733 | 
| Cow position: | chr3:59933371-59933568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 529-725 | 
| Cow position: | chr3:1037023-1037208 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 531-718 | 
| Cow position: | chr3:6040451-6040638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 109, 129 | 
| Conread position: | 534-720 | 
| Cow position: | chr3:621439-621616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 10, 82 | 
| Conread position: | 535-724 | 
| Cow position: | chr3:22716291-22716098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 535-730 | 
| Cow position: | chr3:77006479-77006680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 87, 9 | 
| Conread position: | 535-732 | 
| Cow position: | chr3:48810638-48810450 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 185, 78 | 
| Conread position: | 535-734 | 
| Cow position: | chr3:21959666-21959854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 535-740 | 
| Cow position: | chr3:71497131-71496935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 535-743 | 
| Cow position: | chr3:47753233-47753435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 535-748 | 
| Cow position: | chr3:73589764-73589563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 535-749 | 
| Cow position: | chr3:68094151-68094353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 543-731 | 
| Cow position: | chr3:5850679-5850493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 544-731 | 
| Cow position: | chr3:3262818-3262637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 544-740 | 
| Cow position: | chr3:8814097-8813908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 173, 61 | 
| Conread position: | 544-741 | 
| Cow position: | chr3:57641816-57641999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 548-754 | 
| Cow position: | chr3:2680533-2680746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 33, 38 | 
| Conread position: | 549-758 | 
| Cow position: | chr3:21302444-21302231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 70, 192 | 
| Conread position: | 552-720 | 
| Cow position: | chr3:6853513-6853339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 553-721 | 
| Cow position: | chr3:31048471-31048302 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 103, 160 | 
| Conread position: | 573-724 | 
| Cow position: | chr3:623774-623929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 608-732 | 
| Cow position: | chr3:58562765-58562888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 622-725 | 
| Cow position: | chr3:83504311-83504415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 105 | 
| Alignm identity: | 87 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 27, 0 | 
Show alignments to all cow chromosomes.
