Cow genome map

Conread name: Ss1.1-Pig4-TMW8032P24.3

Conread position: 358-509
Cow position: chr3:8523131-8522980 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 37

Conread position: 359-495
Cow position: chr3:59610694-59610560 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 359-496
Cow position: chr3:74079613-74079478 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 359-496
Cow position: chr3:78077209-78077350 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 74

Conread position: 359-497
Cow position: chr3:52845580-52845716 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 359-502
Cow position: chr3:64196850-64196991 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 359-509
Cow position: chr3:48363096-48363243 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 142, 60

Conread position: 359-509
Cow position: chr3:52608206-52608351 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 359-515
Cow position: chr3:23132145-23131988 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 140, 0

Conread position: 359-518
Cow position: chr3:53222037-53222197 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 139, 63

Conread position: 359-521
Cow position: chr3:10958216-10958058 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 142, 62

Conread position: 359-521
Cow position: chr3:68616306-68616150 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 359-521
Cow position: chr3:75107798-75107959 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 142, 61

Conread position: 359-523
Cow position: chr3:17531714-17531550 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 140

Conread position: 359-525
Cow position: chr3:68004678-68004521 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 359-527
Cow position: chr3:69785600-69785428 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 359-528
Cow position: chr3:4071747-4071577 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 33

Conread position: 359-529
Cow position: chr3:82425055-82424884 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 148, 83

Conread position: 359-530
Cow position: chr3:22924351-22924187 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 359-530
Cow position: chr3:32248035-32248208 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 40

Conread position: 359-530
Cow position: chr3:49363133-49363303 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 142, 62

Conread position: 359-530
Cow position: chr3:59604867-59605038 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 142, 63

Conread position: 359-531
Cow position: chr3:39969838-39969667 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 140, 63

Conread position: 359-541
Cow position: chr3:22165392-22165211 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 142, 172

Conread position: 359-545
Cow position: chr3:49344717-49344908 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 359-546
Cow position: chr3:19585887-19586075 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 142, 171

Conread position: 360-509
Cow position: chr3:2636974-2637119 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 141, 60

Conread position: 360-524
Cow position: chr3:50768704-50768872 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 139, 62

Conread position: 361-531
Cow position: chr3:53428891-53428716 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 138, 59

Conread position: 362-514
Cow position: chr3:22676083-22675928 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 77

Conread position: 364-527
Cow position: chr3:27274557-27274720 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 137, 58

Conread position: 364-537
Cow position: chr3:15160549-15160717 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 137, 58

Conread position: 497-734
Cow position: chr3:29413030-29413271 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 159, 39

Conread position: 505-722
Cow position: chr3:562816-562612 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 190, 26

Conread position: 506-652
Cow position: chr3:81547083-81547224 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 512-724
Cow position: chr3:19641044-19641244 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 18

Conread position: 516-747
Cow position: chr3:55320621-55320390 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 12, 25

Conread position: 517-728
Cow position: chr3:13949570-13949356 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 27

Conread position: 518-760
Cow position: chr3:78945852-78945606 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 7, 19

Conread position: 521-734
Cow position: chr3:16752266-16752066 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 7, 24

Conread position: 522-720
Cow position: chr3:25702347-25702156 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 14

Conread position: 524-716
Cow position: chr3:36914047-36914241 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 5

Conread position: 524-720
Cow position: chr3:28937608-28937408 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 12

Conread position: 524-721
Cow position: chr3:67930186-67929994 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 12

Conread position: 524-723
Cow position: chr3:54782006-54781815 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 524-724
Cow position: chr3:65413281-65413087 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 12

Conread position: 524-726
Cow position: chr3:61467193-61466989 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 123, 12

Conread position: 524-728
Cow position: chr3:17235214-17235021 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 524-729
Cow position: chr3:54100729-54100529 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 524-732
Cow position: chr3:53192295-53192088 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 525-722
Cow position: chr3:33329815-33330011 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 527-657
Cow position: chr3:32409211-32409340 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 527-708
Cow position: chr3:26603553-26603383 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 159, 86

Conread position: 527-714
Cow position: chr3:17222143-17221964 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 90

Conread position: 527-721
Cow position: chr3:23132170-23131992 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 527-722
Cow position: chr3:64648491-64648688 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 120, 0

Conread position: 527-732
Cow position: chr3:5305797-5305990 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 86, 0

Conread position: 527-732
Cow position: chr3:24371921-24372140 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 92, 17

Conread position: 527-732
Cow position: chr3:70565739-70565526 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 96, 150

Conread position: 527-733
Cow position: chr3:67994920-67995125 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 87, 16

Conread position: 527-735
Cow position: chr3:76415904-76415693 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 119, 78

Conread position: 527-735
Cow position: chr3:80072128-80072333 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 87, 0

Conread position: 527-740
Cow position: chr3:3316816-3316613 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 527-743
Cow position: chr3:1785246-1785022 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 97, 0

Conread position: 527-743
Cow position: chr3:74802067-74801845 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 88

Conread position: 528-733
Cow position: chr3:59933371-59933568 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 529-725
Cow position: chr3:1037023-1037208 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 531-718
Cow position: chr3:6040451-6040638 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 109, 129

Conread position: 534-720
Cow position: chr3:621439-621616 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 82

Conread position: 535-724
Cow position: chr3:22716291-22716098 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 535-730
Cow position: chr3:77006479-77006680 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 9

Conread position: 535-732
Cow position: chr3:48810638-48810450 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 185, 78

Conread position: 535-734
Cow position: chr3:21959666-21959854 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 535-740
Cow position: chr3:71497131-71496935 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 535-743
Cow position: chr3:47753233-47753435 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 535-748
Cow position: chr3:73589764-73589563 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 535-749
Cow position: chr3:68094151-68094353 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 543-731
Cow position: chr3:5850679-5850493 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 544-731
Cow position: chr3:3262818-3262637 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 77, 0

Conread position: 544-740
Cow position: chr3:8814097-8813908 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 173, 61

Conread position: 544-741
Cow position: chr3:57641816-57641999 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 548-754
Cow position: chr3:2680533-2680746 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 38

Conread position: 549-758
Cow position: chr3:21302444-21302231 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 70, 192

Conread position: 552-720
Cow position: chr3:6853513-6853339 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 553-721
Cow position: chr3:31048471-31048302 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 160

Conread position: 573-724
Cow position: chr3:623774-623929 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 608-732
Cow position: chr3:58562765-58562888 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 622-725
Cow position: chr3:83504311-83504415 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.