Cow genome map

Conread name: Ss1.1-Pig4-TMW8033B19.5

Conread position: 13-321
Cow position: chr13:47676191-47675891 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 198
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 42

Conread position: 22-297
Cow position: chr13:41157154-41157428 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 180, 23

Conread position: 29-297
Cow position: chr13:30798471-30798745 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 46-297
Cow position: chr13:45023445-45023187 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 80, 193

Conread position: 46-301
Cow position: chr13:55674432-55674181 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 153, 90

Conread position: 298-487
Cow position: chr13:728648-728462 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 168, 32

Conread position: 300-475
Cow position: chr13:25693093-25692919 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 155, 0

Conread position: 301-437
Cow position: chr13:34869392-34869255 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 94

Conread position: 301-465
Cow position: chr13:34938857-34938690 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 42

Conread position: 301-474
Cow position: chr13:48359046-48358874 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 25

Conread position: 301-474
Cow position: chr13:60424170-60423996 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 11, 94

Conread position: 301-475
Cow position: chr13:11797287-11797461 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 95

Conread position: 301-475
Cow position: chr13:15449727-15449907 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 35

Conread position: 301-475
Cow position: chr13:20540836-20541010 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 97

Conread position: 301-476
Cow position: chr13:43590735-43590565 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 93, 0

Conread position: 301-480
Cow position: chr13:16253091-16253275 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 95

Conread position: 301-480
Cow position: chr13:34324158-34324341 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 95

Conread position: 302-474
Cow position: chr13:5500580-5500753 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 10, 94

Conread position: 302-475
Cow position: chr13:6358543-6358370 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 12, 94

Conread position: 302-475
Cow position: chr13:32983925-32984098 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 93

Conread position: 302-487
Cow position: chr13:60468845-60468660 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 7, 92

Conread position: 303-432
Cow position: chr13:32735776-32735904 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 303-451
Cow position: chr13:9298862-9298715 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 303-451
Cow position: chr13:31508323-31508176 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 303-451
Cow position: chr13:42090277-42090424 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 303-465
Cow position: chr13:30304613-30304454 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 303-474
Cow position: chr13:33524540-33524710 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 303-474
Cow position: chr13:34343322-34343152 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr13:3652892-3653067 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 96

Conread position: 303-475
Cow position: chr13:4485205-4485038 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 303-475
Cow position: chr13:11388413-11388244 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 303-475
Cow position: chr13:13326341-13326173 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr13:13901282-13901113 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 303-475
Cow position: chr13:14186416-14186248 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr13:14401692-14401862 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr13:42217266-42217436 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr13:43981669-43981841 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 95

Conread position: 303-475
Cow position: chr13:49975081-49974912 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 303-475
Cow position: chr13:50110869-50110699 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 303-476
Cow position: chr13:31610895-31611067 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 303-476
Cow position: chr13:50661690-50661520 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 303-480
Cow position: chr13:35758697-35758519 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 149, 91

Conread position: 303-482
Cow position: chr13:4942801-4942626 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 68

Conread position: 303-486
Cow position: chr13:17309879-17309698 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 303-486
Cow position: chr13:50192982-50193161 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 303-487
Cow position: chr13:6666723-6666905 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 303-487
Cow position: chr13:21697680-21697498 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 303-487
Cow position: chr13:21838791-21838974 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 303-487
Cow position: chr13:32923719-32923902 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 87, 92

Conread position: 303-487
Cow position: chr13:60648389-60648571 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 91, 0

Conread position: 304-475
Cow position: chr13:33334902-33335069 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 95

Conread position: 310-475
Cow position: chr13:679160-678997 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 310-475
Cow position: chr13:2387396-2387559 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 310-475
Cow position: chr13:11793669-11793838 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 80, 150

Conread position: 310-475
Cow position: chr13:15543949-15543786 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 310-475
Cow position: chr13:34040925-34041088 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 316-451
Cow position: chr13:34764437-34764571 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 79

Conread position: 322-484
Cow position: chr13:3534492-3534651 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 326-486
Cow position: chr13:28860557-28860398 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 331-474
Cow position: chr13:34908651-34908796 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 63

Conread position: 346-475
Cow position: chr13:30239700-30239573 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 0

Show alignments to all cow chromosomes.