Cow genome map

Conread name: Ss1.1-Pig4-TMW8033B19.5

Conread position: 13-291
Cow position: chr15:14740838-14740565 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 180
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 136, 29

Conread position: 13-301
Cow position: chr15:36435050-36435335 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 187
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 137, 154

Conread position: 15-297
Cow position: chr15:43914248-43913961 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 183, 153

Conread position: 17-300
Cow position: chr15:19807871-19807586 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 184
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 126, 115

Conread position: 51-371
Cow position: chr15:15041542-15041222 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 204
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 120

Conread position: 55-296
Cow position: chr15:30471089-30470846 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 149, 219

Conread position: 301-442
Cow position: chr15:35646391-35646531 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 95

Conread position: 301-451
Cow position: chr15:1878954-1879105 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 8, 98

Conread position: 301-451
Cow position: chr15:6080036-6079885 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 95

Conread position: 301-451
Cow position: chr15:7235618-7235467 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 11, 95

Conread position: 301-451
Cow position: chr15:36668997-36668849 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 95

Conread position: 301-452
Cow position: chr15:53299755-53299607 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 301-453
Cow position: chr15:7939728-7939579 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 301-464
Cow position: chr15:35737089-35736926 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 98

Conread position: 301-472
Cow position: chr15:1238978-1238807 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 8, 98

Conread position: 301-472
Cow position: chr15:7892054-7892225 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 11

Conread position: 301-474
Cow position: chr15:18331540-18331714 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 95

Conread position: 301-475
Cow position: chr15:329628-329453 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 96

Conread position: 301-475
Cow position: chr15:4951393-4951219 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 99

Conread position: 301-475
Cow position: chr15:7261893-7261725 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 301-475
Cow position: chr15:7838562-7838388 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 11, 94

Conread position: 301-475
Cow position: chr15:8100754-8100580 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 11, 98

Conread position: 301-475
Cow position: chr15:32067316-32067489 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 11, 95

Conread position: 301-477
Cow position: chr15:51716713-51716531 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 160

Conread position: 301-480
Cow position: chr15:53410199-53410021 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 95

Conread position: 301-482
Cow position: chr15:1765609-1765431 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 70

Conread position: 301-487
Cow position: chr15:42531208-42531020 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 63

Conread position: 302-451
Cow position: chr15:6279765-6279619 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 57

Conread position: 302-475
Cow position: chr15:2588155-2588328 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 92

Conread position: 302-475
Cow position: chr15:4687021-4686848 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 92

Conread position: 302-475
Cow position: chr15:35752014-35752186 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 93

Conread position: 302-475
Cow position: chr15:50122641-50122812 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 302-481
Cow position: chr15:7929861-7929685 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 113, 10

Conread position: 302-486
Cow position: chr15:2646361-2646542 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 7, 93

Conread position: 302-487
Cow position: chr15:6614014-6613829 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 93

Conread position: 303-427
Cow position: chr15:6382872-6382995 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 303-437
Cow position: chr15:580708-580575 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 303-437
Cow position: chr15:3890194-3890061 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 303-439
Cow position: chr15:24718610-24718481 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 303-451
Cow position: chr15:14581074-14581221 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 303-451
Cow position: chr15:36624567-36624708 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 303-474
Cow position: chr15:9911943-9912112 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 163, 86

Conread position: 303-474
Cow position: chr15:32712526-32712356 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr15:1833350-1833519 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 303-475
Cow position: chr15:4141448-4141615 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 303-475
Cow position: chr15:4197756-4197586 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr15:4726491-4726321 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 303-475
Cow position: chr15:5010342-5010512 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr15:6154637-6154807 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr15:10478240-10478406 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 303-475
Cow position: chr15:17077274-17077443 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 303-475
Cow position: chr15:19736768-19736936 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 303-475
Cow position: chr15:20411885-20411717 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr15:25653777-25653947 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr15:28488864-28489033 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr15:32492595-32492764 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr15:44071887-44071718 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 303-475
Cow position: chr15:53339512-53339340 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 92

Conread position: 303-481
Cow position: chr15:4652659-4652482 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 152, 91

Conread position: 303-482
Cow position: chr15:4679566-4679389 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 146, 35

Conread position: 303-482
Cow position: chr15:51219013-51218835 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 111, 80

Conread position: 303-485
Cow position: chr15:2077938-2077755 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 141, 94

Conread position: 303-487
Cow position: chr15:107290-107108 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 23

Conread position: 303-487
Cow position: chr15:1773789-1773611 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 303-487
Cow position: chr15:2013850-2013666 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 93

Conread position: 303-487
Cow position: chr15:2900971-2901154 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 120, 91

Conread position: 303-487
Cow position: chr15:4387046-4386866 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 303-487
Cow position: chr15:4923433-4923253 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 88

Conread position: 303-487
Cow position: chr15:6561876-6561694 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 90, 0

Conread position: 303-487
Cow position: chr15:8751685-8751503 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 303-487
Cow position: chr15:21664452-21664632 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 303-487
Cow position: chr15:25205717-25205897 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 303-487
Cow position: chr15:31360153-31359967 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 149, 93

Conread position: 303-487
Cow position: chr15:33122667-33122485 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 303-487
Cow position: chr15:35898487-35898669 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 90, 0

Conread position: 303-487
Cow position: chr15:41659457-41659275 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 90, 0

Conread position: 304-482
Cow position: chr15:17294340-17294169 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 39

Conread position: 310-475
Cow position: chr15:4108026-4108190 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 310-475
Cow position: chr15:6590835-6590997 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 310-475
Cow position: chr15:7564279-7564116 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 310-475
Cow position: chr15:24795099-24794938 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 139, 84

Conread position: 310-480
Cow position: chr15:15345826-15345996 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 145, 84

Conread position: 310-481
Cow position: chr15:13390042-13390208 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 310-486
Cow position: chr15:18577995-18577821 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 311-451
Cow position: chr15:20360812-20360951 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 312-483
Cow position: chr15:4766471-4766298 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 141, 89

Conread position: 322-477
Cow position: chr15:7551413-7551263 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 341-453
Cow position: chr15:1299296-1299407 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.