Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8033B19.5 |
| Conread position: | 10-296 |
| Cow position: | chr19:34757764-34758051 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 125, 40 |
| Conread position: | 23-300 |
| Cow position: | chr19:33748073-33747799 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 36, 58 |
| Conread position: | 29-293 |
| Cow position: | chr19:4297898-4297644 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 146, 26 |
| Conread position: | 42-288 |
| Cow position: | chr19:7674468-7674225 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 156, 126 |
| Conread position: | 43-291 |
| Cow position: | chr19:729549-729784 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 102, 12 |
| Conread position: | 46-288 |
| Cow position: | chr19:34608005-34608236 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 152, 18 |
| Conread position: | 46-414 |
| Cow position: | chr19:41497447-41497808 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 145, 9 |
| Conread position: | 48-288 |
| Cow position: | chr19:21199345-21199100 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 297-435 |
| Cow position: | chr19:3139710-3139573 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 298-451 |
| Cow position: | chr19:28404984-28405132 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 300-487 |
| Cow position: | chr19:342981-342796 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 153, 10 |
| Conread position: | 301-437 |
| Cow position: | chr19:39666810-39666945 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 13, 94 |
| Conread position: | 301-472 |
| Cow position: | chr19:30756951-30756776 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 301-472 |
| Cow position: | chr19:35107058-35107227 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 301-474 |
| Cow position: | chr19:206243-206071 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 117, 9 |
| Conread position: | 301-475 |
| Cow position: | chr19:891898-892072 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 301-487 |
| Cow position: | chr19:40850731-40850915 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 6, 38 |
| Conread position: | 301-499 |
| Cow position: | chr19:9706438-9706628 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 13, 32 |
| Conread position: | 302-475 |
| Cow position: | chr19:7343804-7343633 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 94 |
| Conread position: | 302-475 |
| Cow position: | chr19:39392244-39392075 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 302-488 |
| Cow position: | chr19:40032-39848 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 303-435 |
| Cow position: | chr19:33596034-33596165 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 303-438 |
| Cow position: | chr19:30559921-30559787 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 303-442 |
| Cow position: | chr19:265388-265251 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-453 |
| Cow position: | chr19:437705-437854 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-472 |
| Cow position: | chr19:173993-173828 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 107, 89 |
| Conread position: | 303-475 |
| Cow position: | chr19:774338-774168 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-475 |
| Cow position: | chr19:1583986-1583816 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-475 |
| Cow position: | chr19:1587504-1587673 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 303-475 |
| Cow position: | chr19:2272382-2272552 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-475 |
| Cow position: | chr19:12774838-12774668 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 303-475 |
| Cow position: | chr19:20106460-20106290 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-475 |
| Cow position: | chr19:28579941-28580111 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-475 |
| Cow position: | chr19:33875145-33874975 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-475 |
| Cow position: | chr19:33943301-33943131 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-475 |
| Cow position: | chr19:39183811-39183981 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-475 |
| Cow position: | chr19:52149948-52150118 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-485 |
| Cow position: | chr19:5730575-5730395 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-487 |
| Cow position: | chr19:4387335-4387155 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 142, 91 |
| Conread position: | 303-487 |
| Cow position: | chr19:5899775-5899957 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-487 |
| Cow position: | chr19:16318895-16319077 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 310-407 |
| Cow position: | chr19:30453628-30453723 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 310-475 |
| Cow position: | chr19:32210348-32210511 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 322-474 |
| Cow position: | chr19:40815796-40815946 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 341-473 |
| Cow position: | chr19:50724243-50724113 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.