Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8033B19.5 |
| Conread position: | 28-297 |
| Cow position: | chr25:40904602-40904871 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 33-301 |
| Cow position: | chr25:41130449-41130186 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 44-288 |
| Cow position: | chr25:12657098-12657339 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 155, 124 |
| Conread position: | 45-287 |
| Cow position: | chr25:4521632-4521866 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 106 |
| Conread position: | 46-297 |
| Cow position: | chr25:12098043-12097799 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 242, 97 |
| Conread position: | 46-298 |
| Cow position: | chr25:40682942-40682698 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 152, 9 |
| Conread position: | 55-297 |
| Cow position: | chr25:22348261-22348501 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 143, 77 |
| Conread position: | 56-288 |
| Cow position: | chr25:9989906-9990140 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 61-321 |
| Cow position: | chr25:13223088-13222837 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 138, 9 |
| Conread position: | 283-475 |
| Cow position: | chr25:20773667-20773857 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 301-435 |
| Cow position: | chr25:18273097-18273231 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 301-446 |
| Cow position: | chr25:18485880-18486026 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 11, 95 |
| Conread position: | 301-447 |
| Cow position: | chr25:35627760-35627903 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 95 |
| Conread position: | 301-474 |
| Cow position: | chr25:17558877-17559051 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 11, 95 |
| Conread position: | 301-475 |
| Cow position: | chr25:12757434-12757609 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 11, 94 |
| Conread position: | 301-476 |
| Cow position: | chr25:15365622-15365450 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 301-476 |
| Cow position: | chr25:16924715-16924892 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 6, 93 |
| Conread position: | 301-487 |
| Cow position: | chr25:18305825-18305634 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 11, 97 |
| Conread position: | 302-482 |
| Cow position: | chr25:2368686-2368504 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 7, 93 |
| Conread position: | 303-427 |
| Cow position: | chr25:33260907-33260784 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 109, 38 |
| Conread position: | 303-465 |
| Cow position: | chr25:33575255-33575418 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 149, 93 |
| Conread position: | 303-473 |
| Cow position: | chr25:11931111-11931283 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 145, 91 |
| Conread position: | 303-474 |
| Cow position: | chr25:20631308-20631138 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 163, 91 |
| Conread position: | 303-475 |
| Cow position: | chr25:11042031-11041863 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 303-475 |
| Cow position: | chr25:18178369-18178199 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 303-475 |
| Cow position: | chr25:18888060-18888230 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-475 |
| Cow position: | chr25:19338916-19339085 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 303-475 |
| Cow position: | chr25:22149225-22149055 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-475 |
| Cow position: | chr25:27020912-27021082 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-475 |
| Cow position: | chr25:32581206-32581036 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-480 |
| Cow position: | chr25:19922224-19922046 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 138, 91 |
| Conread position: | 303-482 |
| Cow position: | chr25:34345320-34345487 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-487 |
| Cow position: | chr25:12940989-12941169 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 303-487 |
| Cow position: | chr25:13062026-13062208 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 303-487 |
| Cow position: | chr25:13692984-13693166 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 303-487 |
| Cow position: | chr25:13782731-13782549 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-487 |
| Cow position: | chr25:17587883-17588071 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 145, 90 |
| Conread position: | 303-487 |
| Cow position: | chr25:20346299-20346481 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 310-474 |
| Cow position: | chr25:25508384-25508221 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 319-473 |
| Cow position: | chr25:21902703-21902549 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 135, 68 |
Show alignments to all cow chromosomes.