Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8033B19.5 |
| Conread position: | 21-300 |
| Cow position: | chr27:7304882-7304610 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 177, 34 |
| Conread position: | 24-287 |
| Cow position: | chr27:426698-426952 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 171, 30 |
| Conread position: | 30-287 |
| Cow position: | chr27:30483572-30483314 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 34-301 |
| Cow position: | chr27:2592272-2592538 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 25, 89 |
| Conread position: | 45-293 |
| Cow position: | chr27:23594066-23594311 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 138, 103 |
| Conread position: | 45-304 |
| Cow position: | chr27:23560282-23560031 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 154, 87 |
| Conread position: | 46-291 |
| Cow position: | chr27:5553219-5553456 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 46-297 |
| Cow position: | chr27:11982900-11982653 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 52-297 |
| Cow position: | chr27:19508766-19509007 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 150, 80 |
| Conread position: | 292-476 |
| Cow position: | chr27:27194705-27194891 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 8, 104 |
| Conread position: | 297-641 |
| Cow position: | chr27:23319319-23319662 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 301-451 |
| Cow position: | chr27:10327088-10327240 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 11, 89 |
| Conread position: | 301-475 |
| Cow position: | chr27:12748677-12748503 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 11, 95 |
| Conread position: | 301-475 |
| Cow position: | chr27:13898952-13898779 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 11, 27 |
| Conread position: | 301-480 |
| Cow position: | chr27:16264406-16264583 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 11, 96 |
| Conread position: | 303-458 |
| Cow position: | chr27:167291-167445 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 303-464 |
| Cow position: | chr27:9331371-9331212 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-474 |
| Cow position: | chr27:8199445-8199275 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-475 |
| Cow position: | chr27:797930-798100 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-475 |
| Cow position: | chr27:1676935-1677104 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-475 |
| Cow position: | chr27:3233885-3234055 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-475 |
| Cow position: | chr27:4981009-4980840 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 303-475 |
| Cow position: | chr27:5912553-5912385 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 303-475 |
| Cow position: | chr27:15635706-15635875 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 303-475 |
| Cow position: | chr27:16032766-16032936 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 303-475 |
| Cow position: | chr27:19525182-19525020 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-475 |
| Cow position: | chr27:26326698-26326528 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-481 |
| Cow position: | chr27:9991579-9991751 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 303-487 |
| Cow position: | chr27:1900401-1900583 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 303-487 |
| Cow position: | chr27:29056797-29056615 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 310-472 |
| Cow position: | chr27:15274438-15274597 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 310-475 |
| Cow position: | chr27:1210986-1210823 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 310-475 |
| Cow position: | chr27:6160239-6160403 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 310-475 |
| Cow position: | chr27:27664625-27664462 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 310-487 |
| Cow position: | chr27:19260328-19260153 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 83, 0 |
Show alignments to all cow chromosomes.