Cow genome map

Conread name: Ss1.1-Pig4-TMW8033B19.5

Conread position: 11-322
Cow position: chr4:45250212-45249902 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 205
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 89

Conread position: 12-301
Cow position: chr4:44854050-44854338 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 187
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 136

Conread position: 17-295
Cow position: chr4:38977660-38977934 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 69

Conread position: 40-296
Cow position: chr4:2940927-2940676 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 158, 20

Conread position: 55-298
Cow position: chr4:22138025-22138268 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 111

Conread position: 60-304
Cow position: chr4:20026919-20027156 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 139, 53

Conread position: 301-434
Cow position: chr4:19004966-19005099 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 94

Conread position: 301-470
Cow position: chr4:357273-357106 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 11, 95

Conread position: 301-472
Cow position: chr4:20236030-20236201 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 93

Conread position: 301-472
Cow position: chr4:60262797-60262965 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 74

Conread position: 301-475
Cow position: chr4:9846839-9847013 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 11, 95

Conread position: 301-480
Cow position: chr4:20067359-20067538 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 94

Conread position: 301-480
Cow position: chr4:28833084-28832909 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 94

Conread position: 301-480
Cow position: chr4:51041924-51042100 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 11, 67

Conread position: 301-484
Cow position: chr4:6488998-6489181 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 95

Conread position: 301-485
Cow position: chr4:49717139-49716952 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 99

Conread position: 301-487
Cow position: chr4:28653129-28653310 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 302-451
Cow position: chr4:14139740-14139592 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 122
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 302-471
Cow position: chr4:1952200-1952369 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 94

Conread position: 302-475
Cow position: chr4:44726944-44726772 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 7, 93

Conread position: 302-479
Cow position: chr4:1929275-1929455 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 8, 94

Conread position: 302-487
Cow position: chr4:604997-604812 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 10, 94

Conread position: 302-487
Cow position: chr4:43882471-43882285 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 93

Conread position: 302-488
Cow position: chr4:34177880-34178068 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 94

Conread position: 303-431
Cow position: chr4:6267827-6267954 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 303-431
Cow position: chr4:27335302-27335175 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 303-437
Cow position: chr4:530782-530648 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 132, 91

Conread position: 303-464
Cow position: chr4:17244470-17244311 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 303-469
Cow position: chr4:41191268-41191433 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 136, 94

Conread position: 303-472
Cow position: chr4:827572-827405 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 303-472
Cow position: chr4:3127175-3127008 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 303-472
Cow position: chr4:33494919-33494752 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 303-474
Cow position: chr4:5881519-5881353 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 303-474
Cow position: chr4:36897740-36897570 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 85, 38

Conread position: 303-475
Cow position: chr4:98853-99023 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr4:6567743-6567573 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr4:6865144-6865313 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 303-475
Cow position: chr4:10882912-10882742 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr4:12239860-12240030 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr4:12588691-12588522 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 303-475
Cow position: chr4:16060642-16060473 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr4:16361285-16361115 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr4:16639974-16639804 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr4:17092499-17092668 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 303-475
Cow position: chr4:18338218-18338048 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr4:25598121-25598291 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 303-475
Cow position: chr4:26876424-26876589 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 303-475
Cow position: chr4:32213536-32213366 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr4:33022273-33022444 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 92

Conread position: 303-475
Cow position: chr4:33071478-33071640 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 303-475
Cow position: chr4:41956127-41955957 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr4:41960263-41960094 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 303-475
Cow position: chr4:57985355-57985186 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 303-475
Cow position: chr4:67682561-67682391 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 303-476
Cow position: chr4:37988703-37988531 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 303-476
Cow position: chr4:41978031-41978202 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 303-485
Cow position: chr4:9355743-9355561 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 174, 90

Conread position: 303-486
Cow position: chr4:14387185-14387003 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 163, 91

Conread position: 303-486
Cow position: chr4:43318272-43318453 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 303-487
Cow position: chr4:160521-160339 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 303-487
Cow position: chr4:3356569-3356751 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 303-487
Cow position: chr4:4417416-4417239 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 303-487
Cow position: chr4:5443461-5443643 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 303-487
Cow position: chr4:17501967-17502149 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 90, 0

Conread position: 303-487
Cow position: chr4:18423157-18423341 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 138, 98

Conread position: 303-487
Cow position: chr4:30472577-30472395 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 303-487
Cow position: chr4:44779856-44780038 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 306-464
Cow position: chr4:48028222-48028066 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 88, 0

Conread position: 310-451
Cow position: chr4:14755314-14755457 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 87

Conread position: 310-464
Cow position: chr4:17924604-17924756 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 310-475
Cow position: chr4:13494689-13494520 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 82

Conread position: 312-475
Cow position: chr4:1048909-1049069 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 339-475
Cow position: chr4:31563955-31564089 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 341-487
Cow position: chr4:45106792-45106648 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.