Cow genome map

Conread name: Ss1.1-Pig4-TMW8033B19.5

Conread position: 15-297
Cow position: chr5:32394868-32394586 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 185
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 23

Conread position: 44-291
Cow position: chr5:40889058-40889302 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 154, 124

Conread position: 46-288
Cow position: chr5:60514790-60515030 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 38, 122

Conread position: 50-300
Cow position: chr5:62812058-62811810 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 148, 101

Conread position: 51-297
Cow position: chr5:43403139-43402895 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 147, 83

Conread position: 55-311
Cow position: chr5:47756998-47756752 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 142, 108

Conread position: 297-470
Cow position: chr5:23686443-23686618 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 157, 96

Conread position: 297-475
Cow position: chr5:27198082-27197906 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 300-479
Cow position: chr5:18665236-18665058 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 166, 93

Conread position: 301-451
Cow position: chr5:18274223-18274072 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 95

Conread position: 301-465
Cow position: chr5:31099966-31100129 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 97

Conread position: 301-471
Cow position: chr5:45701780-45701610 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 94

Conread position: 301-474
Cow position: chr5:18114095-18114262 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 165, 10

Conread position: 301-474
Cow position: chr5:41527325-41527502 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 97

Conread position: 301-475
Cow position: chr5:10920306-10920136 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 301-475
Cow position: chr5:23230451-23230281 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 92

Conread position: 301-475
Cow position: chr5:26184331-26184158 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 27

Conread position: 301-475
Cow position: chr5:31122116-31122290 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 11, 95

Conread position: 301-475
Cow position: chr5:46004405-46004576 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 95

Conread position: 301-475
Cow position: chr5:59283787-59283613 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 95

Conread position: 301-475
Cow position: chr5:73487597-73487770 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 6, 96

Conread position: 301-476
Cow position: chr5:41960278-41960451 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 32, 7

Conread position: 301-483
Cow position: chr5:18885060-18885242 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 95

Conread position: 301-484
Cow position: chr5:1340575-1340760 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 96

Conread position: 301-484
Cow position: chr5:76096523-76096339 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 95

Conread position: 301-487
Cow position: chr5:7275302-7275117 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 176, 9

Conread position: 301-489
Cow position: chr5:42751941-42751744 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 97

Conread position: 302-437
Cow position: chr5:20108371-20108235 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 8, 94

Conread position: 302-472
Cow position: chr5:58197486-58197316 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 12, 94

Conread position: 302-490
Cow position: chr5:41955957-41956148 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 157, 91

Conread position: 303-402
Cow position: chr5:1228259-1228161 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 303-410
Cow position: chr5:3254141-3254247 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 303-411
Cow position: chr5:54860507-54860614 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 303-432
Cow position: chr5:34698117-34697989 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 303-437
Cow position: chr5:12681584-12681717 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 303-437
Cow position: chr5:13047106-13046973 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 303-437
Cow position: chr5:40758387-40758253 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 92

Conread position: 303-437
Cow position: chr5:51744742-51744609 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 303-458
Cow position: chr5:10841914-10842068 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 303-464
Cow position: chr5:3787404-3787246 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 303-464
Cow position: chr5:31708030-31707871 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 303-472
Cow position: chr5:64780547-64780714 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 303-474
Cow position: chr5:3965920-3965746 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 303-474
Cow position: chr5:10855351-10855520 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 303-474
Cow position: chr5:12731248-12731417 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 303-474
Cow position: chr5:47829610-47829781 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 130, 91

Conread position: 303-475
Cow position: chr5:2915901-2915731 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr5:2975257-2975087 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr5:3502640-3502811 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 143, 94

Conread position: 303-475
Cow position: chr5:4070683-4070515 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 303-475
Cow position: chr5:4756716-4756886 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr5:6153431-6153601 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr5:6587121-6587291 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr5:10774796-10774966 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr5:18121015-18121185 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr5:29434295-29434457 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 303-475
Cow position: chr5:32774232-32774062 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 303-475
Cow position: chr5:35301565-35301395 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 303-475
Cow position: chr5:37378593-37378423 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr5:37733816-37733646 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 303-475
Cow position: chr5:46777860-46777690 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 303-475
Cow position: chr5:48807266-48807436 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr5:57481072-57481242 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr5:59062103-59061933 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 91, 0

Conread position: 303-479
Cow position: chr5:46808770-46808595 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 163, 90

Conread position: 303-482
Cow position: chr5:55629450-55629279 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 303-483
Cow position: chr5:2459449-2459268 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 153, 38

Conread position: 303-484
Cow position: chr5:26077726-26077907 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 169, 93

Conread position: 303-485
Cow position: chr5:4684338-4684516 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 94, 0

Conread position: 303-486
Cow position: chr5:49223028-49223207 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 303-486
Cow position: chr5:57816226-57816408 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 303-487
Cow position: chr5:306947-307128 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 303-487
Cow position: chr5:987601-987783 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 303-487
Cow position: chr5:10813283-10813465 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 90, 0

Conread position: 303-487
Cow position: chr5:23830854-23831036 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 303-487
Cow position: chr5:23958863-23959045 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 91, 0

Conread position: 303-487
Cow position: chr5:40131135-40131317 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 303-487
Cow position: chr5:41376387-41376569 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 303-487
Cow position: chr5:46737127-46737312 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 141, 91

Conread position: 310-450
Cow position: chr5:24152228-24152088 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 12, 84

Conread position: 310-472
Cow position: chr5:24100109-24099955 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 310-472
Cow position: chr5:53946288-53946130 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 310-474
Cow position: chr5:18559945-18560110 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 93, 146

Conread position: 310-474
Cow position: chr5:49520008-49519845 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 310-485
Cow position: chr5:23755023-23755195 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 311-475
Cow position: chr5:5104674-5104513 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 311-475
Cow position: chr5:61080750-61080914 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 35

Conread position: 319-453
Cow position: chr5:32952345-32952214 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 326-475
Cow position: chr5:27907827-27907974 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 68, 0

Show alignments to all cow chromosomes.