Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8033B19.5 | 
| Conread position: | 13-293 | 
| Cow position: | chr6:48436112-48435842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 36, 26 | 
| Conread position: | 23-297 | 
| Cow position: | chr6:47783137-47782859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 175, 19 | 
| Conread position: | 41-288 | 
| Cow position: | chr6:67728631-67728387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 157, 127 | 
| Conread position: | 43-316 | 
| Cow position: | chr6:48988685-48988415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 155, 106 | 
| Conread position: | 46-304 | 
| Cow position: | chr6:62670118-62669861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 153, 9 | 
| Conread position: | 51-287 | 
| Cow position: | chr6:19345344-19345115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 70, 142 | 
| Conread position: | 297-447 | 
| Cow position: | chr6:18972853-18972999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 299-474 | 
| Cow position: | chr6:40865716-40865886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 8, 24 | 
| Conread position: | 299-475 | 
| Cow position: | chr6:27375312-27375487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 19, 97 | 
| Conread position: | 301-464 | 
| Cow position: | chr6:12627307-12627148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 11, 42 | 
| Conread position: | 301-469 | 
| Cow position: | chr6:34196954-34196786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 82, 98 | 
| Conread position: | 301-472 | 
| Cow position: | chr6:1821020-1821189 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 301-474 | 
| Cow position: | chr6:3572203-3572028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 10, 95 | 
| Conread position: | 301-474 | 
| Cow position: | chr6:47625670-47625497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 11, 95 | 
| Conread position: | 301-474 | 
| Cow position: | chr6:65907180-65907353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 11, 56 | 
| Conread position: | 301-475 | 
| Cow position: | chr6:10680025-10679851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 9, 98 | 
| Conread position: | 301-475 | 
| Cow position: | chr6:21974278-21974105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 11, 50 | 
| Conread position: | 301-475 | 
| Cow position: | chr6:27528411-27528583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 13, 78 | 
| Conread position: | 301-475 | 
| Cow position: | chr6:34890518-34890688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 13, 74 | 
| Conread position: | 301-475 | 
| Cow position: | chr6:35418697-35418871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 11, 95 | 
| Conread position: | 301-475 | 
| Cow position: | chr6:47041601-47041773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 11, 95 | 
| Conread position: | 301-475 | 
| Cow position: | chr6:57471276-57471102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 11, 95 | 
| Conread position: | 301-475 | 
| Cow position: | chr6:58602088-58601913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 11, 95 | 
| Conread position: | 301-476 | 
| Cow position: | chr6:66547082-66546910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 92, 0 | 
| Conread position: | 301-486 | 
| Cow position: | chr6:21835588-21835773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 11, 98 | 
| Conread position: | 301-487 | 
| Cow position: | chr6:15478779-15478589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 18, 94 | 
| Conread position: | 301-487 | 
| Cow position: | chr6:44261871-44262059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 10, 95 | 
| Conread position: | 301-487 | 
| Cow position: | chr6:58028334-58028142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 11, 74 | 
| Conread position: | 302-474 | 
| Cow position: | chr6:28489961-28490132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 9, 94 | 
| Conread position: | 302-475 | 
| Cow position: | chr6:7139733-7139906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 7, 97 | 
| Conread position: | 302-475 | 
| Cow position: | chr6:11723592-11723764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 7, 95 | 
| Conread position: | 302-475 | 
| Cow position: | chr6:11871047-11871220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 10, 94 | 
| Conread position: | 302-475 | 
| Cow position: | chr6:12664713-12664886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 9, 94 | 
| Conread position: | 302-475 | 
| Cow position: | chr6:13945518-13945347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 92, 0 | 
| Conread position: | 302-481 | 
| Cow position: | chr6:6158317-6158146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 302-484 | 
| Cow position: | chr6:13848674-13848494 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 9, 33 | 
| Conread position: | 302-486 | 
| Cow position: | chr6:55541649-55541833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 7, 93 | 
| Conread position: | 303-429 | 
| Cow position: | chr6:14390533-14390408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 303-431 | 
| Cow position: | chr6:66233404-66233278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-451 | 
| Cow position: | chr6:59617695-59617550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 303-453 | 
| Cow position: | chr6:10250003-10250152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-453 | 
| Cow position: | chr6:40552976-40553125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 303-453 | 
| Cow position: | chr6:64717924-64717775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-471 | 
| Cow position: | chr6:477143-476976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-471 | 
| Cow position: | chr6:50636475-50636307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 71, 92 | 
| Conread position: | 303-471 | 
| Cow position: | chr6:65843220-65843053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-472 | 
| Cow position: | chr6:703816-703649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-472 | 
| Cow position: | chr6:51716137-51715970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-474 | 
| Cow position: | chr6:28134513-28134339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 82, 93 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:50001-50169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:329861-330029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:5948176-5948347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 69, 7 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:8203794-8203623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:8759693-8759863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:13309774-13309944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:15139569-15139739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:16053714-16053545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:17596691-17596861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 32, 23 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:25215822-25215652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:25792152-25792322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:26669258-26669427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:27171185-27171015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:28703105-28703275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:30273289-30273459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:35875106-35875276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:38273173-38273003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:39333268-39333438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:44002276-44002108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:51731685-51731515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-475 | 
| Cow position: | chr6:52694631-52694461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-477 | 
| Cow position: | chr6:41229048-41228876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-482 | 
| Cow position: | chr6:2376279-2376107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 303-482 | 
| Cow position: | chr6:39910936-39910759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 174, 64 | 
| Conread position: | 303-485 | 
| Cow position: | chr6:28170513-28170334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 42, 91 | 
| Conread position: | 303-485 | 
| Cow position: | chr6:40327023-40326843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 303-485 | 
| Cow position: | chr6:65820366-65820548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 169, 91 | 
| Conread position: | 303-486 | 
| Cow position: | chr6:1409777-1409960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 105, 91 | 
| Conread position: | 303-486 | 
| Cow position: | chr6:40276687-40276506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 303-487 | 
| Cow position: | chr6:183938-184120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-487 | 
| Cow position: | chr6:2877079-2877261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 303-487 | 
| Cow position: | chr6:5749529-5749347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 303-487 | 
| Cow position: | chr6:16591561-16591384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 303-487 | 
| Cow position: | chr6:20559506-20559684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 303-487 | 
| Cow position: | chr6:24241009-24240823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 149, 91 | 
| Conread position: | 303-487 | 
| Cow position: | chr6:28104258-28104441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 85, 92 | 
| Conread position: | 303-487 | 
| Cow position: | chr6:40379026-40379208 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 303-487 | 
| Cow position: | chr6:43791964-43792146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 303-487 | 
| Cow position: | chr6:44148944-44149125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 303-487 | 
| Cow position: | chr6:45587552-45587374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 303-487 | 
| Cow position: | chr6:47047576-47047758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 303-488 | 
| Cow position: | chr6:43619328-43619145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 91, 0 | 
| Conread position: | 304-474 | 
| Cow position: | chr6:1534975-1535143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 310-471 | 
| Cow position: | chr6:14080898-14080736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 111, 84 | 
| Conread position: | 310-475 | 
| Cow position: | chr6:17243703-17243864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 310-475 | 
| Cow position: | chr6:58460724-58460883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 310-485 | 
| Cow position: | chr6:58066312-58066142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 311-474 | 
| Cow position: | chr6:915227-915068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 312-471 | 
| Cow position: | chr6:3150830-3150672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 318-475 | 
| Cow position: | chr6:13105624-13105471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 322-451 | 
| Cow position: | chr6:10339057-10339183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 325-475 | 
| Cow position: | chr6:68028508-68028360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 69, 0 | 
Show alignments to all cow chromosomes.
