Cow genome map

Conread name: Ss1.1-Pig4-TMW8033B19.5

Conread position: 13-293
Cow position: chr6:48436112-48435842 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 26

Conread position: 23-297
Cow position: chr6:47783137-47782859 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 186
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 175, 19

Conread position: 41-288
Cow position: chr6:67728631-67728387 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 157, 127

Conread position: 43-316
Cow position: chr6:48988685-48988415 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 155, 106

Conread position: 46-304
Cow position: chr6:62670118-62669861 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 165
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 153, 9

Conread position: 51-287
Cow position: chr6:19345344-19345115 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 142

Conread position: 297-447
Cow position: chr6:18972853-18972999 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 299-474
Cow position: chr6:40865716-40865886 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 8, 24

Conread position: 299-475
Cow position: chr6:27375312-27375487 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 97

Conread position: 301-464
Cow position: chr6:12627307-12627148 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 42

Conread position: 301-469
Cow position: chr6:34196954-34196786 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 98

Conread position: 301-472
Cow position: chr6:1821020-1821189 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 301-474
Cow position: chr6:3572203-3572028 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 95

Conread position: 301-474
Cow position: chr6:47625670-47625497 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 11, 95

Conread position: 301-474
Cow position: chr6:65907180-65907353 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 56

Conread position: 301-475
Cow position: chr6:10680025-10679851 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 98

Conread position: 301-475
Cow position: chr6:21974278-21974105 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 50

Conread position: 301-475
Cow position: chr6:27528411-27528583 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 78

Conread position: 301-475
Cow position: chr6:34890518-34890688 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 74

Conread position: 301-475
Cow position: chr6:35418697-35418871 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 95

Conread position: 301-475
Cow position: chr6:47041601-47041773 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 95

Conread position: 301-475
Cow position: chr6:57471276-57471102 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 95

Conread position: 301-475
Cow position: chr6:58602088-58601913 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 95

Conread position: 301-476
Cow position: chr6:66547082-66546910 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 301-486
Cow position: chr6:21835588-21835773 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 98

Conread position: 301-487
Cow position: chr6:15478779-15478589 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 18, 94

Conread position: 301-487
Cow position: chr6:44261871-44262059 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 10, 95

Conread position: 301-487
Cow position: chr6:58028334-58028142 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 74

Conread position: 302-474
Cow position: chr6:28489961-28490132 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 9, 94

Conread position: 302-475
Cow position: chr6:7139733-7139906 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 7, 97

Conread position: 302-475
Cow position: chr6:11723592-11723764 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 7, 95

Conread position: 302-475
Cow position: chr6:11871047-11871220 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 94

Conread position: 302-475
Cow position: chr6:12664713-12664886 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 94

Conread position: 302-475
Cow position: chr6:13945518-13945347 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 302-481
Cow position: chr6:6158317-6158146 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 302-484
Cow position: chr6:13848674-13848494 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 33

Conread position: 302-486
Cow position: chr6:55541649-55541833 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 7, 93

Conread position: 303-429
Cow position: chr6:14390533-14390408 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 303-431
Cow position: chr6:66233404-66233278 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 303-451
Cow position: chr6:59617695-59617550 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 303-453
Cow position: chr6:10250003-10250152 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 303-453
Cow position: chr6:40552976-40553125 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 303-453
Cow position: chr6:64717924-64717775 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 303-471
Cow position: chr6:477143-476976 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 303-471
Cow position: chr6:50636475-50636307 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 92

Conread position: 303-471
Cow position: chr6:65843220-65843053 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 303-472
Cow position: chr6:703816-703649 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 303-472
Cow position: chr6:51716137-51715970 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 303-474
Cow position: chr6:28134513-28134339 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 93

Conread position: 303-475
Cow position: chr6:50001-50169 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr6:329861-330029 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 303-475
Cow position: chr6:5948176-5948347 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 7

Conread position: 303-475
Cow position: chr6:8203794-8203623 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr6:8759693-8759863 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr6:13309774-13309944 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 93, 0

Conread position: 303-475
Cow position: chr6:15139569-15139739 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr6:16053714-16053545 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 303-475
Cow position: chr6:17596691-17596861 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 32, 23

Conread position: 303-475
Cow position: chr6:25215822-25215652 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr6:25792152-25792322 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr6:26669258-26669427 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 303-475
Cow position: chr6:27171185-27171015 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr6:28703105-28703275 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 303-475
Cow position: chr6:30273289-30273459 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr6:35875106-35875276 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr6:38273173-38273003 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 303-475
Cow position: chr6:39333268-39333438 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 303-475
Cow position: chr6:44002276-44002108 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr6:51731685-51731515 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 303-475
Cow position: chr6:52694631-52694461 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 303-477
Cow position: chr6:41229048-41228876 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 303-482
Cow position: chr6:2376279-2376107 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 303-482
Cow position: chr6:39910936-39910759 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 174, 64

Conread position: 303-485
Cow position: chr6:28170513-28170334 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 42, 91

Conread position: 303-485
Cow position: chr6:40327023-40326843 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 303-485
Cow position: chr6:65820366-65820548 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 169, 91

Conread position: 303-486
Cow position: chr6:1409777-1409960 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 105, 91

Conread position: 303-486
Cow position: chr6:40276687-40276506 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 303-487
Cow position: chr6:183938-184120 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 303-487
Cow position: chr6:2877079-2877261 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 303-487
Cow position: chr6:5749529-5749347 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 303-487
Cow position: chr6:16591561-16591384 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 303-487
Cow position: chr6:20559506-20559684 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 303-487
Cow position: chr6:24241009-24240823 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 149, 91

Conread position: 303-487
Cow position: chr6:28104258-28104441 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 85, 92

Conread position: 303-487
Cow position: chr6:40379026-40379208 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 303-487
Cow position: chr6:43791964-43792146 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 303-487
Cow position: chr6:44148944-44149125 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 303-487
Cow position: chr6:45587552-45587374 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 303-487
Cow position: chr6:47047576-47047758 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 90, 0

Conread position: 303-488
Cow position: chr6:43619328-43619145 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 304-474
Cow position: chr6:1534975-1535143 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 310-471
Cow position: chr6:14080898-14080736 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 111, 84

Conread position: 310-475
Cow position: chr6:17243703-17243864 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 310-475
Cow position: chr6:58460724-58460883 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 310-485
Cow position: chr6:58066312-58066142 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 311-474
Cow position: chr6:915227-915068 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 312-471
Cow position: chr6:3150830-3150672 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 318-475
Cow position: chr6:13105624-13105471 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 322-451
Cow position: chr6:10339057-10339183 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 325-475
Cow position: chr6:68028508-68028360 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 0

Show alignments to all cow chromosomes.