Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8033D14.3 |
| Conread position: | 1-371 |
| Cow position: | chr29:31987380-31987010 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-424 |
| Cow position: | chr29:31992108-31991685 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 338 |
| Conread position: | 1-427 |
| Cow position: | chr29:31997017-31996591 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 410, 391 |
| Conread position: | 1-435 |
| Cow position: | chr29:31988772-31988338 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-435 |
| Cow position: | chr29:31990752-31990318 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-435 |
| Cow position: | chr29:31994473-31994038 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 1-599 |
| Cow position: | chr29:31998538-31997961 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 348, 338 |
| Conread position: | 1-600 |
| Cow position: | chr29:31987764-31987165 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-600 |
| Cow position: | chr29:31989156-31988557 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-600 |
| Cow position: | chr29:31989924-31989325 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-600 |
| Cow position: | chr29:31992492-31991893 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-600 |
| Cow position: | chr29:31992876-31992277 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-600 |
| Cow position: | chr29:31993260-31992661 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-600 |
| Cow position: | chr29:31993644-31993045 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-600 |
| Cow position: | chr29:31994857-31994257 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 516, 0 |
| Conread position: | 1-600 |
| Cow position: | chr29:31995241-31994642 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-600 |
| Cow position: | chr29:31995625-31995026 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-600 |
| Cow position: | chr29:31996009-31995410 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-600 |
| Cow position: | chr29:31998922-31998323 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-263 |
| Cow position: | chr29:31998174-31997913 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 232 |
| Conread position: | 2-320 |
| Cow position: | chr29:31999284-31998966 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-423 |
| Cow position: | chr29:31997622-31997201 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 251 |
| Conread position: | 2-600 |
| Cow position: | chr29:31989539-31988941 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-600 |
| Cow position: | chr29:31991135-31990537 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-360 |
| Cow position: | chr29:31999862-31999517 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 54, 44 |
| Conread position: | 38-600 |
| Cow position: | chr29:31991474-31990921 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 114 |
| Conread position: | 73-600 |
| Cow position: | chr29:31988076-31987549 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-600 |
| Cow position: | chr29:31997328-31996802 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-371 |
| Cow position: | chr29:31996519-31996224 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 242, 226 |
| Conread position: | 76-600 |
| Cow position: | chr29:31996318-31995794 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 100-586 |
| Cow position: | chr29:31991787-31991319 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 312 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 249, 238 |
| Conread position: | 101-350 |
| Cow position: | chr29:31988450-31988201 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 184, 171 |
| Conread position: | 101-371 |
| Cow position: | chr29:31996695-31996425 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 217, 201 |
| Conread position: | 101-423 |
| Cow position: | chr29:31990430-31990108 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 101-423 |
| Cow position: | chr29:31994150-31993828 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 101-600 |
| Cow position: | chr29:31990208-31989709 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 101-600 |
| Cow position: | chr29:31993928-31993429 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 110-600 |
| Cow position: | chr29:31999566-31999070 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 123 |
| Conread position: | 143-424 |
| Cow position: | chr29:31988228-31987947 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 146, 161 |
| Conread position: | 155-597 |
| Cow position: | chr29:31997853-31997411 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 325-600 |
| Cow position: | chr29:31998982-31998707 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 486-600 |
| Cow position: | chr29:31990429-31990315 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 486-600 |
| Cow position: | chr29:31994149-31994035 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.