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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8033E16.3
        

               
Conread position:
               
1-99
               

               
Cow position:
               
chr23:1065677-1065773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-103
               

               
Cow position:
               
chr23:3282726-3282624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-112
               

               
Cow position:
               
chr23:13408959-13409068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-118
               

               
Cow position:
               
chr23:11163319-11163205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr23:770628-770512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr23:20977602-20977718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-129
               

               
Cow position:
               
chr23:34264854-34264729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
1-142
               

               
Cow position:
               
chr23:9231877-9231739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr23:35941886-35942046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr23:14969928-14969764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
119, 81
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr23:922076-922241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr23:2721589-2721751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
121, 67
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr23:10843985-10844147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr23:39762027-39762194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr23:26230985-26231151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr23:30588880-30589054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr23:13945416-13945594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr23:7311531-7311712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr23:2802648-2802444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr23:16072889-16073072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr23:40370938-40370751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr23:1240719-1240909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr23:14576083-14576274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
120, 82
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr23:30752182-30751988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr23:39207248-39207055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
126, 75
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr23:35937682-35937872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
37, 69
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr23:19737465-19737269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr23:772310-772505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
178, 79
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr23:977179-976982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr23:1323497-1323694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
157, 77
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr23:12570781-12570584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr23:14910566-14910370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr23:18655545-18655742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr23:29811308-29811505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr23:31606299-31606496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr23:39126215-39126026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr23:19967291-19967492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 109
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr23:20734166-20734370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
197, 86
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr23:15214983-15214781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr23:28076504-28076295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr23:34855003-34854795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr23:35653762-35653969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr23:22170777-22170993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr23:39745731-39745947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr23:40081124-40081341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr23:28987902-28988119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
123, 86
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr23:31827374-31827591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
206, 86
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr23:38708868-38709085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr23:3549324-3549106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr23:9133007-9132789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr23:11399761-11399985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
197, 78
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr23:10936425-10936198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr23:14266190-14266418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
206, 79
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr23:39235710-39235482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
152, 38
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr23:2723617-2723849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr23:9517803-9517571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
200, 79
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr23:11459363-11459131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
124, 86
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr23:11965451-11965219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr23:11973520-11973750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
217, 67
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr23:19002409-19002179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 77
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr23:23849413-23849650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 113
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr23:31607513-31607270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
79, 190
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr23:32657561-32657795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
107, 79
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr23:2520398-2520164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 77
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr23:34315309-34315076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 100
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr23:31395270-31395040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
109, 66
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:672041-672278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:805983-806220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:1113823-1114060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:1582038-1582275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:2528527-2528290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:3873414-3873177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:5458610-5458847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:6442624-6442387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:7494485-7494722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:9266992-9266755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
120, 81
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:10840741-10840978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:11070935-11071172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:11409600-11409363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:14385837-14385600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:15271578-15271341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:20455962-20455725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 78
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:20545716-20545479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:22011142-22011379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:25352232-25352469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:25380953-25381190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:25883339-25883572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 9
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:26932431-26932194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:27314614-27314851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
121, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:27423736-27423973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:28183443-28183680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:28622027-28621790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:31126945-31126708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:31585173-31585410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:39110753-39110990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:39784628-39784865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr23:40710792-40711024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr23:666448-666218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 72
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr23:3485312-3485550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr23:18491827-18492065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
217, 77
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr23:5691095-5690862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
179, 69
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr23:20001735-20001962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
217, 77
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr23:36159221-36159461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
110, 47
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr23:11559360-11559111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
89, 243
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr23:20586053-20585816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
217, 78
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr23:208502-208734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr23:26824651-26824879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr23:3328251-3328008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
222, 76
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr23:8327321-8327571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
116, 79
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr23:21351084-21350838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
199, 79
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr23:26003723-26003966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr23:18487409-18487658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
200, 87
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr23:1131764-1132014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
144, 86
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr23:28366668-28366421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
112, 80
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr23:8005914-8006149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
215, 60
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr23:15020785-15021037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr23:573396-573137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
134, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr23:2320077-2319825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr23:4437478-4437730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
200, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr23:9235406-9235164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 109
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr23:14245169-14245420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 78
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr23:15764198-15764451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr23:19202970-19202718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
121, 84
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr23:21772037-21771784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr23:30622535-30622282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 80
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr23:30889306-30889542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
201, 86
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr23:31354006-31354259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr23:32555516-32555266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
159, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr23:32650415-32650161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
201, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr23:38580962-38581209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
231, 76
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr23:292701-292957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr23:2790904-2790650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 26
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr23:3208552-3208296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr23:4079980-4079724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr23:4636480-4636221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
96, 79
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr23:11376472-11376218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr23:14958018-14957762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 78
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr23:26373824-26374080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr23:26829114-26829362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
231, 79
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr23:37198456-37198203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
141, 68
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr23:40553270-40553014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
141, 78
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr23:4608727-4608467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 35
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr23:35926258-35926507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
231, 53
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr23:14164744-14164486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr23:28118441-28118184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 50
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr23:32961717-32961450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 115
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr23:39573643-39573376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
69, 145
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr23:39793109-39793366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr23:24504908-24505169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
200, 78
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr23:28052936-28053196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 86
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr23:18367355-18367619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 78
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr23:361252-360990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr23:3208957-3208687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
92, 57
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr23:3286616-3286896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
109, 79
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr23:29441341-29441061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 86
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr23:6720618-6720348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr23:14566064-14565785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 191
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr23:3321839-3322118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr23:5151640-5151922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr23:11564691-11564400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 157
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr23:16495410-16495117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 41
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr23:29447383-29447093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
39, 87
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr23:1321532-1321251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 70
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr23:221729-222022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 79
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr23:4855977-4855677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
109, 76
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr23:8708263-8708562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
121, 86
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr23:17678232-17677939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr23:19056494-19056197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
124, 86
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr23:22143155-22142858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr23:30334470-30334174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
126, 65
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr23:32052251-32052552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr23:40774199-40774498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr23:2531674-2531391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
205, 67
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr23:2470256-2470541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
214, 79
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr23:2371039-2371329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
217, 108
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr23:14896136-14895854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
15, 19
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr23:15003664-15003944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
217, 37
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:4267307-4267607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr23:27735084-27735382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr23:41285595-41285878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 53
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr23:37992655-37992949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
218, 86
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr23:25562467-25562156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
217, 79
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr23:15529445-15529754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr23:3727740-3727421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 77
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr23:39741076-39740758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
212, 79
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr23:406498-406194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 18
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr23:8959258-8959573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 79
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr23:16058258-16058572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 78
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr23:35070143-35070450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
231, 77
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr23:36027382-36027066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
217, 79
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr23:1670580-1670882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
274, 28
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr23:15729028-15728715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 44
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr23:6158547-6158238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
236, 77
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr23:25336634-25336310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr23:778299-777986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
158, 47
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr23:1047216-1046893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
223, 76
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr23:2311887-2311560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr23:3825165-3824838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr23:3827219-3826892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr23:10873790-10873463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr23:11711842-11711515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr23:12896948-12896626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 68
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr23:17846975-17847294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
119, 11
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr23:28085025-28085352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr23:40633519-40633186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 86
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr23:29824405-29824082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 79
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr23:1959994-1960327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr23:5623709-5623370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr23:7429109-7429445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 79
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr23:11782657-11782993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 86
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr23:16172318-16172654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr23:19493724-19494060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
129, 86
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr23:24098997-24099332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 84
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr23:26798028-26797682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
121, 8
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr23:28306713-28307052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 79
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr23:28916199-28916533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 79
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr23:30633721-30633389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 85
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr23:39389923-39390259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 86
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr23:1009740-1009408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 18
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr23:4273840-4274180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr23:40780987-40781316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 76
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr23:3734577-3734238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr23:3877308-3876971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 78
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr23:8308664-8308325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr23:10518073-10517751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
242, 86
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr23:14215365-14215026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 87
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr23:24120426-24120763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr23:31638479-31638816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr23:35284648-35284310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
129, 70
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr23:39747907-39748246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
30, 90
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr23:11344363-11344717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 79
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr23:18204144-18204497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
354, 75
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr23:15569433-15569791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr23:38934362-38933993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 90
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr23:4531919-4531530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
96, 79
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr23:9595170-9594781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 78
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr23:416829-417218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
217, 75
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr23:36129240-36128836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr23:7392624-7392219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 76
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr23:27996797-27997216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 76
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr23:9711944-9711507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
72, 413
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr23:16383815-16383384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 79
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr23:40825653-40826081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
212, 74
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr23:15710418-15709981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
201, 88
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr23:39806522-39806961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 123
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr23:33658180-33657742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr23:353919-353502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 86
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr23:1721343-1720879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 191
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr23:11844950-11845379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 24
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr23:34347995-34348419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
115, 68
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr23:40526313-40525878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 116
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr23:10014207-10014638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 68
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr23:25669407-25668979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 35
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr23:8911138-8911579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 27
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr23:1640470-1640908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 84
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr23:21336830-21336361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 86
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr23:9641757-9641311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
113, 67
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr23:1924174-1923712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 79
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr23:7596669-7596228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 65
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr23:10554352-10553883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 78
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr23:18698368-18697898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr23:11473847-11473376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr23:1700581-1701023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 74
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr23:13511395-13511858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 62
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr23:30662965-30662509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 86
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr23:1254330-1254822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 17
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr23:24866965-24867444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 47
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr23:26319078-26319540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr23:344516-343981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 62
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr23:7844948-7845486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr23:22804383-22804920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 76
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr23:25865020-25864494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 68
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr23:1289962-1290507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 64
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr23:24509362-24509886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 79
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr23:26741791-26741288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 86
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr23:28206274-28206801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 48
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr23:38455526-38454958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 80
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr23:4996425-4995890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 30
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr23:5389367-5389886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
115, 38
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr23:7175282-7175825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 68
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr23:10852714-10853254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 70
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr23:35929660-35930154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
84, 121
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chr23:5870528-5869980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 203
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chr23:15180812-15181362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 79
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr23:26841115-26841634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 57
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr23:9734078-9734634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 79
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr23:40502843-40502294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 64
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr23:8698105-8698639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 76
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr23:22530747-22530223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 69
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr23:533892-534441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 74
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr23:18802614-18802048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 86
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr23:21789112-21788554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 86
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr23:25676010-25675481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
217, 53
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr23:33601861-33601318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 79
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr23:34356317-34356854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
129, 77
               

               
Conread position:
               
1-532
               

               
Cow position:
               
chr23:11128892-11129453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 37
               

               
Conread position:
               
1-533
               

               
Cow position:
               
chr23:2179988-2179444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 86
               

               
Conread position:
               
1-534
               

               
Cow position:
               
chr23:1430141-1429613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 179
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr23:3394847-3394284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 130
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr23:16246403-16246959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 75
               

               
Conread position:
               
1-543
               

               
Cow position:
               
chr23:34416228-34416800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 156
               

               
Conread position:
               
1-566
               

               
Cow position:
               
chr23:2502205-2501607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 195
               

               
Conread position:
               
2-168
               

               
Cow position:
               
chr23:7374534-7374698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
120, 17
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr23:20980505-20980687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr23:39813109-39813293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
2-198
               

               
Cow position:
               
chr23:11084007-11083812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr23:27529628-27529412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr23:9223019-9223227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr23:15702845-15702616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
216, 85
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr23:17848269-17848500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
119, 85
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr23:26322765-26322545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr23:30912643-30912408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 203
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr23:11010009-11009784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
216, 33
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr23:26932810-26933046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
119, 85
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr23:25363003-25363253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 83
               

               
Conread position:
               
2-252
               

               
Cow position:
               
chr23:3710573-3710820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
118, 77
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr23:610573-610825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
119, 77
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr23:7852293-7852041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
196, 85
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr23:28120162-28120412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
140, 85
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr23:28358985-28358737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
139, 68
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr23:32007557-32007310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
230, 83
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr23:3717034-3717291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
108, 80
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr23:41472275-41472529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
184, 62
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr23:32309341-32309613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
213, 85
               

               
Conread position:
               
2-291
               

               
Cow position:
               
chr23:28032101-28032392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
139, 82
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr23:2369653-2369939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
108, 78
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr23:11080257-11080577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
123, 85
               

               
Conread position:
               
2-320
               

               
Cow position:
               
chr23:479188-479511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 13
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr23:4892569-4892895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
221, 78
               

               
Conread position:
               
2-330
               

               
Cow position:
               
chr23:2021794-2021470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
211, 78
               

               
Conread position:
               
2-335
               

               
Cow position:
               
chr23:29043656-29043994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
118, 85
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr23:1604887-1605314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 74
               

               
Conread position:
               
2-412
               

               
Cow position:
               
chr23:17796657-17796237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 87
               

               
Conread position:
               
2-413
               

               
Cow position:
               
chr23:1647279-1647707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 190
               

               
Conread position:
               
2-438
               

               
Cow position:
               
chr23:18797043-18796587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 331
               

               
Conread position:
               
2-445
               

               
Cow position:
               
chr23:20435392-20434938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 68
               

               
Conread position:
               
2-450
               

               
Cow position:
               
chr23:1398374-1397908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 69
               

               
Conread position:
               
2-514
               

               
Cow position:
               
chr23:14839072-14838563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 67
               

               
Conread position:
               
2-521
               

               
Cow position:
               
chr23:4579377-4578829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 201
               

               
Conread position:
               
2-521
               

               
Cow position:
               
chr23:24562224-24561708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 127
               

               
Conread position:
               
2-522
               

               
Cow position:
               
chr23:37065501-37066062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 29
               

               
Conread position:
               
2-534
               

               
Cow position:
               
chr23:13520118-13520659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 78
               

               
Conread position:
               
2-537
               

               
Cow position:
               
chr23:26986620-26986048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 171
               

               
Conread position:
               
2-550
               

               
Cow position:
               
chr23:18322757-18322213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 50
               

               
Conread position:
               
3-132
               

               
Cow position:
               
chr23:15844700-15844574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr23:19910290-19910105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr23:1696490-1696721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr23:4293308-4293555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr23:27378137-27378388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
210, 86
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr23:12864561-12864837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
119, 77
               

               
Conread position:
               
3-306
               

               
Cow position:
               
chr23:40734666-40734361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
127, 76
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr23:29175650-29175952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 74
               

               
Conread position:
               
3-313
               

               
Cow position:
               
chr23:5738067-5737752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
198, 22
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr23:33074889-33075216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
118, 84
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr23:36146784-36146390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
182, 75
               

               
Conread position:
               
3-445
               

               
Cow position:
               
chr23:14739114-14739574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 64
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr23:4972448-4972953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
3-517
               

               
Cow position:
               
chr23:5162088-5162643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 64
               

               
Conread position:
               
3-531
               

               
Cow position:
               
chr23:39778077-39778609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 74
               

               
Conread position:
               
3-533
               

               
Cow position:
               
chr23:1535983-1536532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 111
               

               
Conread position:
               
3-541
               

               
Cow position:
               
chr23:40777924-40778485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 84
               

               
Conread position:
               
4-100
               

               
Cow position:
               
chr23:16583450-16583356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
4-123
               

               
Cow position:
               
chr23:11079148-11079261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr23:29467067-29466851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr23:22574396-22574166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 84
               

               
Conread position:
               
4-253
               

               
Cow position:
               
chr23:7324416-7324681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
156, 66
               

               
Conread position:
               
4-258
               

               
Cow position:
               
chr23:7791251-7791006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
228, 76
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr23:1719177-1719435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
86, 183
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr23:2799232-2799508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 18
               

               
Conread position:
               
4-315
               

               
Cow position:
               
chr23:14191214-14191532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 83
               

               
Conread position:
               
4-330
               

               
Cow position:
               
chr23:769324-768982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
154, 76
               

               
Conread position:
               
4-445
               

               
Cow position:
               
chr23:4529230-4528752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 75
               

               
Conread position:
               
4-507
               

               
Cow position:
               
chr23:31493546-31494058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 50
               

               
Conread position:
               
4-519
               

               
Cow position:
               
chr23:20744927-20744379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 75
               

               
Conread position:
               
4-519
               

               
Cow position:
               
chr23:22298354-22297827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 84
               

               
Conread position:
               
4-541
               

               
Cow position:
               
chr23:39255083-39254514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 45
               

               
Conread position:
               
5-168
               

               
Cow position:
               
chr23:33599715-33599558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr23:25565865-25566057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
108, 74
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr23:18156357-18156573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
5-229
               

               
Cow position:
               
chr23:9712776-9712998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 82
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr23:31277375-31277591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
218, 72
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr23:3167906-3168146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
114, 73
               

               
Conread position:
               
5-243
               

               
Cow position:
               
chr23:14642534-14642297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
196, 73
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr23:36688159-36687927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr23:16170360-16170614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
5-335
               

               
Cow position:
               
chr23:27403009-27403340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
209, 78
               

               
Conread position:
               
5-443
               

               
Cow position:
               
chr23:13599017-13599462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 28
               

               
Conread position:
               
5-458
               

               
Cow position:
               
chr23:9268253-9268722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 82
               

               
Conread position:
               
5-522
               

               
Cow position:
               
chr23:39752777-39753307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 82
               

               
Conread position:
               
5-526
               

               
Cow position:
               
chr23:8930448-8929951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
5-531
               

               
Cow position:
               
chr23:39049749-39049225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 81
               

               
Conread position:
               
5-546
               

               
Cow position:
               
chr23:19636600-19636053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 74
               

               
Conread position:
               
6-232
               

               
Cow position:
               
chr23:5883185-5883409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
196, 96
               

               
Conread position:
               
6-261
               

               
Cow position:
               
chr23:7402370-7402617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 75
               

               
Conread position:
               
6-295
               

               
Cow position:
               
chr23:25408502-25408789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
225, 101
               

               
Conread position:
               
6-445
               

               
Cow position:
               
chr23:6995302-6994857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 61
               

               
Conread position:
               
7-260
               

               
Cow position:
               
chr23:19753286-19753027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
7-261
               

               
Cow position:
               
chr23:16610145-16609893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
211, 80
               

               
Conread position:
               
7-288
               

               
Cow position:
               
chr23:7294066-7294353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
123, 80
               

               
Conread position:
               
7-313
               

               
Cow position:
               
chr23:6180054-6179737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
70, 193
               

               
Conread position:
               
7-319
               

               
Cow position:
               
chr23:10415359-10415044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
244, 51
               

               
Conread position:
               
7-504
               

               
Cow position:
               
chr23:29471449-29470953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
227, 33
               

               
Conread position:
               
7-518
               

               
Cow position:
               
chr23:6223675-6224170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 31
               

               
Conread position:
               
7-531
               

               
Cow position:
               
chr23:1337649-1337095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 133
               

               
Conread position:
               
8-514
               

               
Cow position:
               
chr23:1745358-1745869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 57
               

               
Conread position:
               
9-295
               

               
Cow position:
               
chr23:7750858-7751138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
10-186
               

               
Cow position:
               
chr23:496931-496758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
106, 70
               

               
Conread position:
               
10-233
               

               
Cow position:
               
chr23:11434599-11434373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
75, 182
               

               
Conread position:
               
11-261
               

               
Cow position:
               
chr23:1664360-1664606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 52
               

               
Conread position:
               
11-261
               

               
Cow position:
               
chr23:19755292-19755039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
56, 66
               

               
Conread position:
               
12-181
               

               
Cow position:
               
chr23:7065181-7065021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
12-292
               

               
Cow position:
               
chr23:11404596-11404302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
13-197
               

               
Cow position:
               
chr23:3434293-3434097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 109
               

               
Conread position:
               
14-236
               

               
Cow position:
               
chr23:40862024-40862233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
204, 57
               

               
Conread position:
               
14-237
               

               
Cow position:
               
chr23:12660977-12661192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
193, 66
               

               
Conread position:
               
16-131
               

               
Cow position:
               
chr23:1310610-1310502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
17-252
               

               
Cow position:
               
chr23:4819060-4819295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
105, 65
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr23:20752689-20753007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 61
               

               
Conread position:
               
19-242
               

               
Cow position:
               
chr23:1905705-1905926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 68
               

               
Conread position:
               
19-244
               

               
Cow position:
               
chr23:3745281-3745506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
136, 51
               

               
Conread position:
               
20-168
               

               
Cow position:
               
chr23:1922389-1922244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
20-488
               

               
Cow position:
               
chr23:21445785-21446285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 142
               

               
Conread position:
               
21-237
               

               
Cow position:
               
chr23:4472433-4472225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
101, 67
               

               
Conread position:
               
21-249
               

               
Cow position:
               
chr23:4464438-4464666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
21-261
               

               
Cow position:
               
chr23:39309435-39309199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 52
               

               
Conread position:
               
21-292
               

               
Cow position:
               
chr23:19948077-19947798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
104, 66
               

               
Conread position:
               
22-221
               

               
Cow position:
               
chr23:2408097-2407904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
22-233
               

               
Cow position:
               
chr23:21624016-21623805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
22-291
               

               
Cow position:
               
chr23:6680798-6680529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
23-192
               

               
Cow position:
               
chr23:29699407-29699241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
23-199
               

               
Cow position:
               
chr23:7360618-7360791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
113, 48
               

               
Conread position:
               
23-237
               

               
Cow position:
               
chr23:25192859-25193074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
98, 64
               

               
Conread position:
               
23-407
               

               
Cow position:
               
chr23:10085499-10085101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
191, 42
               

               
Conread position:
               
24-240
               

               
Cow position:
               
chr23:37190894-37190685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 53
               

               
Conread position:
               
24-256
               

               
Cow position:
               
chr23:3904667-3904890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
25-233
               

               
Cow position:
               
chr23:39780295-39780496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
136, 54
               

               
Conread position:
               
26-491
               

               
Cow position:
               
chr23:7835810-7835309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
192, 32
               

               
Conread position:
               
27-409
               

               
Cow position:
               
chr23:4980853-4980460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
28-323
               

               
Cow position:
               
chr23:28059539-28059839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
93, 59
               

               
Conread position:
               
29-236
               

               
Cow position:
               
chr23:26462162-26461959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
30-258
               

               
Cow position:
               
chr23:1610530-1610767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
30-453
               

               
Cow position:
               
chr23:6593014-6592576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
41, 93
               

               
Conread position:
               
31-237
               

               
Cow position:
               
chr23:6568985-6569192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
96, 56
               

               
Conread position:
               
31-280
               

               
Cow position:
               
chr23:587085-587333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 36
               

               
Conread position:
               
31-348
               

               
Cow position:
               
chr23:12090448-12090120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
170, 56
               

               
Conread position:
               
31-348
               

               
Cow position:
               
chr23:41220542-41220213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
130, 12
               

               
Conread position:
               
31-445
               

               
Cow position:
               
chr23:36172235-36172650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 144
               

               
Conread position:
               
31-514
               

               
Cow position:
               
chr23:4968841-4968333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
32-200
               

               
Cow position:
               
chr23:4903271-4903434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
32-253
               

               
Cow position:
               
chr23:7937846-7937637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 37
               

               
Conread position:
               
32-294
               

               
Cow position:
               
chr23:26435765-26435506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
185, 45
               

               
Conread position:
               
32-398
               

               
Cow position:
               
chr23:16563533-16563914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 19
               

               
Conread position:
               
37-458
               

               
Cow position:
               
chr23:29459399-29458959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 86
               

               
Conread position:
               
38-278
               

               
Cow position:
               
chr23:29329787-29330036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
38-348
               

               
Cow position:
               
chr23:17891199-17890883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 42
               

               
Conread position:
               
38-529
               

               
Cow position:
               
chr23:3247287-3247805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 29
               

               
Conread position:
               
39-224
               

               
Cow position:
               
chr23:20605584-20605398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
39-237
               

               
Cow position:
               
chr23:3449949-3449750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 48
               

               
Conread position:
               
40-514
               

               
Cow position:
               
chr23:1545913-1546378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
41-519
               

               
Cow position:
               
chr23:1883092-1883596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 41
               

               
Conread position:
               
42-237
               

               
Cow position:
               
chr23:19316184-19315988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
42-451
               

               
Cow position:
               
chr23:1428517-1428941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
176, 44
               

               
Conread position:
               
43-191
               

               
Cow position:
               
chr23:13674213-13674071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
43-522
               

               
Cow position:
               
chr23:4726503-4726998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
180, 33
               

               
Conread position:
               
44-240
               

               
Cow position:
               
chr23:35366396-35366205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
174, 43
               

               
Conread position:
               
44-285
               

               
Cow position:
               
chr23:27862030-27862270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
47-315
               

               
Cow position:
               
chr23:23284845-23285109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
48-180
               

               
Cow position:
               
chr23:7468828-7468954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
49-443
               

               
Cow position:
               
chr23:35369303-35368923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 38
               

               
Conread position:
               
49-531
               

               
Cow position:
               
chr23:29626121-29626640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 32
               

               
Conread position:
               
50-237
               

               
Cow position:
               
chr23:13600511-13600323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
50-530
               

               
Cow position:
               
chr23:31601750-31601232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 37
               

               
Conread position:
               
51-253
               

               
Cow position:
               
chr23:5143891-5143688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
51-426
               

               
Cow position:
               
chr23:1690497-1690877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 36
               

               
Conread position:
               
51-428
               

               
Cow position:
               
chr23:20171288-20171686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
207, 28
               

               
Conread position:
               
52-222
               

               
Cow position:
               
chr23:19251628-19251461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
55-200
               

               
Cow position:
               
chr23:13547234-13547090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
55-237
               

               
Cow position:
               
chr23:1409670-1409487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 32
               

               
Conread position:
               
55-237
               

               
Cow position:
               
chr23:4544412-4544229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 32
               

               
Conread position:
               
55-294
               

               
Cow position:
               
chr23:670344-670575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
156, 24
               

               
Conread position:
               
58-167
               

               
Cow position:
               
chr23:32917605-32917501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
58-292
               

               
Cow position:
               
chr23:29478683-29478456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
174, 29
               

               
Conread position:
               
58-463
               

               
Cow position:
               
chr23:35363055-35362633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
199, 19
               

               
Conread position:
               
59-292
               

               
Cow position:
               
chr23:33190954-33190714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
143, 28
               

               
Conread position:
               
62-253
               

               
Cow position:
               
chr23:34883165-34882971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
138, 22
               

               
Conread position:
               
63-306
               

               
Cow position:
               
chr23:3918377-3918129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
163, 24
               

               
Conread position:
               
63-358
               

               
Cow position:
               
chr23:1605400-1605701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
205, 22
               

               
Conread position:
               
63-533
               

               
Cow position:
               
chr23:2316527-2316999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
155, 24
               

               
Conread position:
               
64-236
               

               
Cow position:
               
chr23:7836763-7836591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
154, 19
               

               
Conread position:
               
66-255
               

               
Cow position:
               
chr23:1755880-1756067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
67-256
               

               
Cow position:
               
chr23:8918128-8917941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
67-429
               

               
Cow position:
               
chr23:3262774-3262391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 20
               

               
Conread position:
               
67-445
               

               
Cow position:
               
chr23:38208435-38208852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
67-512
               

               
Cow position:
               
chr23:22396716-22396260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
150, 12
               

               
Conread position:
               
67-516
               

               
Cow position:
               
chr23:9874399-9874860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 20
               

               
Conread position:
               
69-426
               

               
Cow position:
               
chr23:36309154-36309524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
149, 18
               

               
Conread position:
               
70-292
               

               
Cow position:
               
chr23:10824798-10825027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
154, 11
               

               
Conread position:
               
70-294
               

               
Cow position:
               
chr23:12408786-12408554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
6, 91
               

               
Conread position:
               
71-220
               

               
Cow position:
               
chr23:19062305-19062452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
71-324
               

               
Cow position:
               
chr23:4005438-4005167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 84
               

               
Conread position:
               
71-534
               

               
Cow position:
               
chr23:15287410-15286936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 208
               

               
Conread position:
               
72-531
               

               
Cow position:
               
chr23:186901-187398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
73-253
               

               
Cow position:
               
chr23:4598204-4598021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
74-312
               

               
Cow position:
               
chr23:17092758-17092519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
144, 178
               

               
Conread position:
               
75-502
               

               
Cow position:
               
chr23:9599229-9599674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 109
               

               
Conread position:
               
76-208
               

               
Cow position:
               
chr23:28945207-28945336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
76-240
               

               
Cow position:
               
chr23:20025904-20026064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
142, 52
               

               
Conread position:
               
76-265
               

               
Cow position:
               
chr23:36199025-36199210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
76-266
               

               
Cow position:
               
chr23:9725499-9725304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 89
               

               
Conread position:
               
76-295
               

               
Cow position:
               
chr23:4338874-4338655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 15
               

               
Conread position:
               
76-306
               

               
Cow position:
               
chr23:21343514-21343284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
142, 26
               

               
Conread position:
               
76-306
               

               
Cow position:
               
chr23:22588538-22588297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
121, 115
               

               
Conread position:
               
76-412
               

               
Cow position:
               
chr23:20781554-20781898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
17, 124
               

               
Conread position:
               
76-420
               

               
Cow position:
               
chr23:4562619-4562983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
76-444
               

               
Cow position:
               
chr23:11045216-11045608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 95
               

               
Conread position:
               
76-455
               

               
Cow position:
               
chr23:25358463-25358848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 113
               

               
Conread position:
               
76-518
               

               
Cow position:
               
chr23:29242676-29243134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 209
               

               
Conread position:
               
76-529
               

               
Cow position:
               
chr23:37224336-37223879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
13, 118
               

               
Conread position:
               
76-530
               

               
Cow position:
               
chr23:33711503-33711977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
76-531
               

               
Cow position:
               
chr23:8063285-8063743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
76-570
               

               
Cow position:
               
chr23:13555696-13555179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
142, 103
               

               
Conread position:
               
77-210
               

               
Cow position:
               
chr23:34612051-34611922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
77-233
               

               
Cow position:
               
chr23:2041553-2041707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
77-236
               

               
Cow position:
               
chr23:11209742-11209901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
77-245
               

               
Cow position:
               
chr23:20192317-20192488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
77-266
               

               
Cow position:
               
chr23:29742117-29742304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 156
               

               
Conread position:
               
77-279
               

               
Cow position:
               
chr23:38414224-38414022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
160, 50
               

               
Conread position:
               
77-428
               

               
Cow position:
               
chr23:28700735-28701092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
141, 108
               

               
Conread position:
               
77-438
               

               
Cow position:
               
chr23:17404585-17404954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
145, 41
               

               
Conread position:
               
77-452
               

               
Cow position:
               
chr23:11380525-11380119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
115, 342
               

               
Conread position:
               
77-479
               

               
Cow position:
               
chr23:39775464-39775888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 50
               

               
Conread position:
               
77-522
               

               
Cow position:
               
chr23:16881424-16880964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 77
               

               
Conread position:
               
77-557
               

               
Cow position:
               
chr23:26795171-26794669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 124
               

               
Conread position:
               
78-291
               

               
Cow position:
               
chr23:19538260-19538043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
140, 159
               

               
Conread position:
               
79-238
               

               
Cow position:
               
chr23:6359297-6359136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
135, 101
               

               
Conread position:
               
79-332
               

               
Cow position:
               
chr23:7289470-7289215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
139, 57
               

               
Conread position:
               
79-533
               

               
Cow position:
               
chr23:1878136-1877681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 106
               

               
Conread position:
               
80-222
               

               
Cow position:
               
chr23:769855-769712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
80-507
               

               
Cow position:
               
chr23:20195182-20194739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 130
               

               
Conread position:
               
80-514
               

               
Cow position:
               
chr23:26779924-26779476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
152, 90
               

               
Conread position:
               
81-199
               

               
Cow position:
               
chr23:14580756-14580639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
81-237
               

               
Cow position:
               
chr23:6715202-6715042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
81-256
               

               
Cow position:
               
chr23:21254403-21254574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
120, 21
               

               
Conread position:
               
81-312
               

               
Cow position:
               
chr23:7900087-7899851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 63
               

               
Conread position:
               
81-315
               

               
Cow position:
               
chr23:792294-792050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
81-546
               

               
Cow position:
               
chr23:8293238-8293741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 353
               

               
Conread position:
               
82-502
               

               
Cow position:
               
chr23:21452995-21452546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 106
               

               
Conread position:
               
82-518
               

               
Cow position:
               
chr23:29346021-29345575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 34
               

               
Conread position:
               
82-527
               

               
Cow position:
               
chr23:20388898-20388455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
82-530
               

               
Cow position:
               
chr23:5617317-5617789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 35
               

               
Conread position:
               
82-531
               

               
Cow position:
               
chr23:39302454-39302907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 7
               

               
Conread position:
               
83-237
               

               
Cow position:
               
chr23:37692593-37692741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
149, 98
               

               
Conread position:
               
83-522
               

               
Cow position:
               
chr23:26948929-26949397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 401
               

               
Conread position:
               
85-250
               

               
Cow position:
               
chr23:22350486-22350323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
85-253
               

               
Cow position:
               
chr23:18223184-18223012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
85-286
               

               
Cow position:
               
chr23:3140604-3140811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
85-315
               

               
Cow position:
               
chr23:1803535-1803767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
133, 35
               

               
Conread position:
               
85-423
               

               
Cow position:
               
chr23:41590168-41589822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
133, 43
               

               
Conread position:
               
86-217
               

               
Cow position:
               
chr23:5744839-5744969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
86-261
               

               
Cow position:
               
chr23:808904-809083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 85
               

               
Conread position:
               
87-278
               

               
Cow position:
               
chr23:32105617-32105804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
87-288
               

               
Cow position:
               
chr23:18625309-18625519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
131, 29
               

               
Conread position:
               
87-304
               

               
Cow position:
               
chr23:2259855-2259630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
87-322
               

               
Cow position:
               
chr23:1991684-1991440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
130, 95
               

               
Conread position:
               
87-322
               

               
Cow position:
               
chr23:15056898-15056663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
131, 29
               

               
Conread position:
               
87-486
               

               
Cow position:
               
chr23:20057124-20056712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 115
               

               
Conread position:
               
87-521
               

               
Cow position:
               
chr23:16583166-16582701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 120
               

               
Conread position:
               
87-522
               

               
Cow position:
               
chr23:6172919-6172480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 90
               

               
Conread position:
               
88-253
               

               
Cow position:
               
chr23:4740735-4740561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
88-528
               

               
Cow position:
               
chr23:6244843-6244389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 189
               

               
Conread position:
               
89-232
               

               
Cow position:
               
chr23:30745864-30745720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
89-273
               

               
Cow position:
               
chr23:27563964-27563779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
129, 96
               

               
Conread position:
               
89-294
               

               
Cow position:
               
chr23:38854989-38854781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
161, 50
               

               
Conread position:
               
89-307
               

               
Cow position:
               
chr23:25531699-25531481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
134, 38
               

               
Conread position:
               
89-330
               

               
Cow position:
               
chr23:13648299-13648049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
129, 229
               

               
Conread position:
               
89-451
               

               
Cow position:
               
chr23:11315272-11314904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 87
               

               
Conread position:
               
89-505
               

               
Cow position:
               
chr23:26632545-26632989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 27
               

               
Conread position:
               
89-523
               

               
Cow position:
               
chr23:3967802-3967346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 38
               

               
Conread position:
               
90-283
               

               
Cow position:
               
chr23:7221268-7221070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
90-348
               

               
Cow position:
               
chr23:19979202-19978944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
28, 168
               

               
Conread position:
               
90-524
               

               
Cow position:
               
chr23:4810496-4810945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
144, 100
               

               
Conread position:
               
90-524
               

               
Cow position:
               
chr23:5395679-5395275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
90-525
               

               
Cow position:
               
chr23:2282428-2281979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 54
               

               
Conread position:
               
91-315
               

               
Cow position:
               
chr23:3715512-3715746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
130, 48
               

               
Conread position:
               
91-443
               

               
Cow position:
               
chr23:29034060-29034438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 254
               

               
Conread position:
               
92-426
               

               
Cow position:
               
chr23:33940408-33940053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 111
               

               
Conread position:
               
93-208
               

               
Cow position:
               
chr23:21974018-21974133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
93-295
               

               
Cow position:
               
chr23:33696026-33695816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
95-320
               

               
Cow position:
               
chr23:40634389-40634622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
96-261
               

               
Cow position:
               
chr23:41348896-41348729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
122, 20
               

               
Conread position:
               
96-428
               

               
Cow position:
               
chr23:15872949-15872587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
111, 106
               

               
Conread position:
               
96-452
               

               
Cow position:
               
chr23:18402534-18402156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
134, 84
               

               
Conread position:
               
96-518
               

               
Cow position:
               
chr23:2055454-2055862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
122, 209
               

               
Conread position:
               
96-521
               

               
Cow position:
               
chr23:36726162-36725705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
97-531
               

               
Cow position:
               
chr23:26849148-26848678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
119, 53
               

               
Conread position:
               
98-257
               

               
Cow position:
               
chr23:6767646-6767802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 8
               

               
Conread position:
               
99-442
               

               
Cow position:
               
chr23:16700284-16699919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 68
               

               
Conread position:
               
100-482
               

               
Cow position:
               
chr23:6367361-6367763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 163
               

               
Conread position:
               
103-265
               

               
Cow position:
               
chr23:36076062-36075900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
103-408
               

               
Cow position:
               
chr23:2417214-2417538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
129, 85
               

               
Conread position:
               
103-522
               

               
Cow position:
               
chr23:1885417-1884967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
104-200
               

               
Cow position:
               
chr23:12364543-12364448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
104-518
               

               
Cow position:
               
chr23:40891122-40891546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
117, 12
               

               
Conread position:
               
105-452
               

               
Cow position:
               
chr23:33717783-33717410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 285
               

               
Conread position:
               
107-446
               

               
Cow position:
               
chr23:27544595-27544952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
111, 83
               

               
Conread position:
               
110-255
               

               
Cow position:
               
chr23:35136131-35135985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
112, 86
               

               
Conread position:
               
110-260
               

               
Cow position:
               
chr23:14417920-14417767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
110-261
               

               
Cow position:
               
chr23:35254472-35254323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
110-271
               

               
Cow position:
               
chr23:25189105-25189270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
110-274
               

               
Cow position:
               
chr23:10416657-10416498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
110, 67
               

               
Conread position:
               
110-294
               

               
Cow position:
               
chr23:11080847-11081031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
110-325
               

               
Cow position:
               
chr23:4523209-4522991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
108, 10
               

               
Conread position:
               
110-402
               

               
Cow position:
               
chr23:25378422-25378726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
108, 14
               

               
Conread position:
               
110-410
               

               
Cow position:
               
chr23:12050131-12050444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
108, 81
               

               
Conread position:
               
110-412
               

               
Cow position:
               
chr23:18821595-18821298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 189
               

               
Conread position:
               
110-438
               

               
Cow position:
               
chr23:5706766-5707109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 66
               

               
Conread position:
               
110-506
               

               
Cow position:
               
chr23:5603505-5603107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
108, 73
               

               
Conread position:
               
110-521
               

               
Cow position:
               
chr23:15742865-15743296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
110-522
               

               
Cow position:
               
chr23:24704041-24704489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
111-221
               

               
Cow position:
               
chr23:468970-468860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
111-294
               

               
Cow position:
               
chr23:25407685-25407493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
111-332
               

               
Cow position:
               
chr23:10868528-10868749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
123, 81
               

               
Conread position:
               
111-531
               

               
Cow position:
               
chr23:4499369-4498914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
112-452
               

               
Cow position:
               
chr23:10876197-10876529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
112-522
               

               
Cow position:
               
chr23:29521237-29521682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
106, 315
               

               
Conread position:
               
113-441
               

               
Cow position:
               
chr23:30307677-30308027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
113-523
               

               
Cow position:
               
chr23:28721433-28721049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
161, 74
               

               
Conread position:
               
113-538
               

               
Cow position:
               
chr23:7484848-7485255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
117, 58
               

               
Conread position:
               
117-522
               

               
Cow position:
               
chr23:1585614-1585193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
118-278
               

               
Cow position:
               
chr23:4421203-4421049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
119-522
               

               
Cow position:
               
chr23:40789758-40790172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
5, 97
               

               
Conread position:
               
120-480
               

               
Cow position:
               
chr23:5723319-5723701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
101, 65
               

               
Conread position:
               
122-541
               

               
Cow position:
               
chr23:16690284-16689842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 206
               

               
Conread position:
               
125-483
               

               
Cow position:
               
chr23:1489837-1490205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
93, 49
               

               
Conread position:
               
125-512
               

               
Cow position:
               
chr23:4504608-4505008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 211
               

               
Conread position:
               
125-543
               

               
Cow position:
               
chr23:12290063-12290502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
126-285
               

               
Cow position:
               
chr23:1068531-1068373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 59
               

               
Conread position:
               
127-514
               

               
Cow position:
               
chr23:21659720-21660134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
60, 229
               

               
Conread position:
               
129-531
               

               
Cow position:
               
chr23:8923389-8923814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
131-455
               

               
Cow position:
               
chr23:40648941-40648595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
87, 106
               

               
Conread position:
               
131-531
               

               
Cow position:
               
chr23:18902264-18901850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 253
               

               
Conread position:
               
132-452
               

               
Cow position:
               
chr23:18296595-18296940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
86, 53
               

               
Conread position:
               
132-466
               

               
Cow position:
               
chr23:21764705-21765066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
133-261
               

               
Cow position:
               
chr23:22399190-22399320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
136-522
               

               
Cow position:
               
chr23:1776839-1776447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
137-480
               

               
Cow position:
               
chr23:23409539-23409886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
100, 55
               

               
Conread position:
               
137-518
               

               
Cow position:
               
chr23:2457255-2457633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 162
               

               
Conread position:
               
138-401
               

               
Cow position:
               
chr23:20172998-20173260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 119
               

               
Conread position:
               
139-531
               

               
Cow position:
               
chr23:4646308-4646722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 215
               

               
Conread position:
               
139-531
               

               
Cow position:
               
chr23:24930278-24929852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
79, 141
               

               
Conread position:
               
142-452
               

               
Cow position:
               
chr23:20437765-20437469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
76, 123
               

               
Conread position:
               
142-538
               

               
Cow position:
               
chr23:20259379-20258990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
75, 116
               

               
Conread position:
               
143-408
               

               
Cow position:
               
chr23:19227481-19227760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 42
               

               
Conread position:
               
143-531
               

               
Cow position:
               
chr23:40443664-40444070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 286
               

               
Conread position:
               
144-260
               

               
Cow position:
               
chr23:20443498-20443379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
144-261
               

               
Cow position:
               
chr23:30585862-30585746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 91
               

               
Conread position:
               
144-408
               

               
Cow position:
               
chr23:16631064-16631355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 109
               

               
Conread position:
               
144-514
               

               
Cow position:
               
chr23:20248900-20248496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
71, 295
               

               
Conread position:
               
144-518
               

               
Cow position:
               
chr23:36017942-36018367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
145-501
               

               
Cow position:
               
chr23:1189101-1188735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
146-417
               

               
Cow position:
               
chr23:30999377-30999659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 164
               

               
Conread position:
               
146-526
               

               
Cow position:
               
chr23:5451123-5451532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
148-537
               

               
Cow position:
               
chr23:5426231-5426660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
152-260
               

               
Cow position:
               
chr23:40650878-40650768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
154-531
               

               
Cow position:
               
chr23:33569945-33570344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
109, 84
               

               
Conread position:
               
156-445
               

               
Cow position:
               
chr23:2488173-2487865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
163-526
               

               
Cow position:
               
chr23:1759090-1759459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
164-374
               

               
Cow position:
               
chr23:12147739-12147959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
70, 178
               

               
Conread position:
               
164-534
               

               
Cow position:
               
chr23:3282295-3281894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 16
               

               
Conread position:
               
166-531
               

               
Cow position:
               
chr23:40081349-40081714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 117
               

               
Conread position:
               
169-295
               

               
Cow position:
               
chr23:1722720-1722847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
170-518
               

               
Cow position:
               
chr23:25556718-25557080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
175-452
               

               
Cow position:
               
chr23:12334037-12334342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
176-530
               

               
Cow position:
               
chr23:1583359-1583731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 191
               

               
Conread position:
               
180-503
               

               
Cow position:
               
chr23:7360950-7361282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
183-531
               

               
Cow position:
               
chr23:12091524-12091145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 342
               

               
Conread position:
               
184-537
               

               
Cow position:
               
chr23:799831-799446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
40, 369
               

               
Conread position:
               
195-523
               

               
Cow position:
               
chr23:33153342-33152988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 203
               

               
Conread position:
               
196-452
               

               
Cow position:
               
chr23:21502789-21502498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
197-531
               

               
Cow position:
               
chr23:37886-38244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
197-551
               

               
Cow position:
               
chr23:34611621-34611257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
24, 174
               

               
Conread position:
               
198-543
               

               
Cow position:
               
chr23:5436794-5436407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
203-452
               

               
Cow position:
               
chr23:4335935-4336199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
65, 114
               

               
Conread position:
               
205-530
               

               
Cow position:
               
chr23:12363761-12363405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
205-531
               

               
Cow position:
               
chr23:18286056-18286399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 256
               

               
Conread position:
               
206-527
               

               
Cow position:
               
chr23:23197239-23197539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
217-516
               

               
Cow position:
               
chr23:35938213-35938528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
48, 238
               

               
Conread position:
               
218-451
               

               
Cow position:
               
chr23:16076287-16076033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
46, 35
               

               
Conread position:
               
219-507
               

               
Cow position:
               
chr23:2285721-2286015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 178
               

               
Conread position:
               
220-516
               

               
Cow position:
               
chr23:5795352-5795676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
44, 149
               

               
Conread position:
               
222-521
               

               
Cow position:
               
chr23:1438173-1438483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
225-537
               

               
Cow position:
               
chr23:3293599-3293906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
229-488
               

               
Cow position:
               
chr23:26824975-26825234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
230-522
               

               
Cow position:
               
chr23:3245003-3244707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
158, 7
               

               
Conread position:
               
230-531
               

               
Cow position:
               
chr23:11081167-11081471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
194, 7
               

               
Conread position:
               
230-534
               

               
Cow position:
               
chr23:20557933-20557622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
190, 7
               

               
Conread position:
               
234-523
               

               
Cow position:
               
chr23:16744457-16744750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
16, 32
               

               
Conread position:
               
241-519
               

               
Cow position:
               
chr23:24685147-24685443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
247-446
               

               
Cow position:
               
chr23:3814355-3814154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
247-520
               

               
Cow position:
               
chr23:3279547-3279265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
259-529
               

               
Cow position:
               
chr23:3223517-3223229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
16, 121
               

               
Conread position:
               
259-531
               

               
Cow position:
               
chr23:2358811-2359087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
16, 228
               

               
Conread position:
               
273-522
               

               
Cow position:
               
chr23:32480072-32479809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
274-516
               

               
Cow position:
               
chr23:10497644-10497896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
275-531
               

               
Cow position:
               
chr23:2470954-2471222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
276-506
               

               
Cow position:
               
chr23:22586826-22587068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
276-530
               

               
Cow position:
               
chr23:27859734-27860009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
283-530
               

               
Cow position:
               
chr23:19872714-19872486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
283-531
               

               
Cow position:
               
chr23:5881557-5881308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 241
               

               
Conread position:
               
284-451
               

               
Cow position:
               
chr23:22105526-22105692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
143, 16
               

               
Conread position:
               
285-429
               

               
Cow position:
               
chr23:5609117-5608972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
287-457
               

               
Cow position:
               
chr23:32411877-32412055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
288-452
               

               
Cow position:
               
chr23:21440032-21439868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
138, 26
               

               
Conread position:
               
289-507
               

               
Cow position:
               
chr23:20093274-20093053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
290-514
               

               
Cow position:
               
chr23:1403837-1403625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
291-425
               

               
Cow position:
               
chr23:4470529-4470397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
291-440
               

               
Cow position:
               
chr23:1589558-1589710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
291-451
               

               
Cow position:
               
chr23:5400636-5400790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
291-506
               

               
Cow position:
               
chr23:2160663-2160452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
291-512
               

               
Cow position:
               
chr23:40637224-40637460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
291-531
               

               
Cow position:
               
chr23:33696226-33695993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
120, 19
               

               
Conread position:
               
293-466
               

               
Cow position:
               
chr23:2799552-2799724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
134, 21
               

               
Conread position:
               
294-525
               

               
Cow position:
               
chr23:1760872-1760624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
132, 16
               

               
Conread position:
               
294-531
               

               
Cow position:
               
chr23:40995145-40995378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
130, 69
               

               
Conread position:
               
294-537
               

               
Cow position:
               
chr23:30585676-30585425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
131, 9
               

               
Conread position:
               
295-447
               

               
Cow position:
               
chr23:348974-348819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
131, 19
               

               
Conread position:
               
295-452
               

               
Cow position:
               
chr23:18605432-18605276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
295-510
               

               
Cow position:
               
chr23:17486850-17486633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
131, 15
               

               
Conread position:
               
295-519
               

               
Cow position:
               
chr23:18749090-18748873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
295-534
               

               
Cow position:
               
chr23:20539359-20539599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
116, 20
               

               
Conread position:
               
295-538
               

               
Cow position:
               
chr23:35965120-35965368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
126, 19
               

               
Conread position:
               
296-524
               

               
Cow position:
               
chr23:385334-385101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
132, 18
               

               
Conread position:
               
296-527
               

               
Cow position:
               
chr23:33628903-33629133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
123, 18
               

               
Conread position:
               
296-531
               

               
Cow position:
               
chr23:24926789-24927039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
130, 18
               

               
Conread position:
               
297-530
               

               
Cow position:
               
chr23:30244517-30244739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
130, 13
               

               
Conread position:
               
298-522
               

               
Cow position:
               
chr23:4844583-4844818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
299-534
               

               
Cow position:
               
chr23:13202384-13202150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 104
               

               
Conread position:
               
300-452
               

               
Cow position:
               
chr23:17231124-17231281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
300-529
               

               
Cow position:
               
chr23:1222262-1222028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
13, 146
               

               
Conread position:
               
300-541
               

               
Cow position:
               
chr23:18384698-18384946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
302-523
               

               
Cow position:
               
chr23:39330313-39330087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
109, 204
               

               
Conread position:
               
304-481
               

               
Cow position:
               
chr23:21945398-21945214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
311-449
               

               
Cow position:
               
chr23:33160709-33160571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
311-464
               

               
Cow position:
               
chr23:5785833-5785993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
311-515
               

               
Cow position:
               
chr23:40095175-40095381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
114, 11
               

               
Conread position:
               
311-518
               

               
Cow position:
               
chr23:24966474-24966259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
311-519
               

               
Cow position:
               
chr23:1194503-1194292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
311-519
               

               
Cow position:
               
chr23:16961286-16961489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
311-519
               

               
Cow position:
               
chr23:20615338-20615145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
129, 85
               

               
Conread position:
               
311-521
               

               
Cow position:
               
chr23:40501109-40500891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
311-522
               

               
Cow position:
               
chr23:1981670-1981467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
311-522
               

               
Cow position:
               
chr23:5732540-5732743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
311-522
               

               
Cow position:
               
chr23:17597415-17597628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 182
               

               
Conread position:
               
311-522
               

               
Cow position:
               
chr23:25990448-25990232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
117, 62
               

               
Conread position:
               
311-523
               

               
Cow position:
               
chr23:22668516-22668305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
117, 132
               

               
Conread position:
               
311-526
               

               
Cow position:
               
chr23:39267773-39267996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
311-529
               

               
Cow position:
               
chr23:1863463-1863675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
122, 82
               

               
Conread position:
               
311-529
               

               
Cow position:
               
chr23:13137947-13137728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
119, 211
               

               
Conread position:
               
311-531
               

               
Cow position:
               
chr23:9226272-9226489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
311-531
               

               
Cow position:
               
chr23:11212496-11212719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
311-531
               

               
Cow position:
               
chr23:13073850-13073631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 158
               

               
Conread position:
               
311-531
               

               
Cow position:
               
chr23:18822978-18823199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
115, 144
               

               
Conread position:
               
311-531
               

               
Cow position:
               
chr23:28574698-28574923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
311-532
               

               
Cow position:
               
chr23:11224844-11225070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
311-543
               

               
Cow position:
               
chr23:1614669-1614427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
117, 67
               

               
Conread position:
               
311-576
               

               
Cow position:
               
chr23:1652990-1653267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
312-444
               

               
Cow position:
               
chr23:3244479-3244344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
312-450
               

               
Cow position:
               
chr23:14569511-14569370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
312-451
               

               
Cow position:
               
chr23:37118720-37118582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 40
               

               
Conread position:
               
312-451
               

               
Cow position:
               
chr23:39275881-39276028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
312-493
               

               
Cow position:
               
chr23:6767895-6768086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
312-507
               

               
Cow position:
               
chr23:3234792-3234587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
115, 100
               

               
Conread position:
               
312-514
               

               
Cow position:
               
chr23:283403-283204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
128, 109
               

               
Conread position:
               
312-518
               

               
Cow position:
               
chr23:40275554-40275355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
114, 45
               

               
Conread position:
               
312-518
               

               
Cow position:
               
chr23:40391466-40391677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
312-520
               

               
Cow position:
               
chr23:4003634-4003853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
312-520
               

               
Cow position:
               
chr23:22238832-22238615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
114, 187
               

               
Conread position:
               
312-521
               

               
Cow position:
               
chr23:10416431-10416222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
143, 102
               

               
Conread position:
               
312-521
               

               
Cow position:
               
chr23:16447697-16447489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
118, 42
               

               
Conread position:
               
312-521
               

               
Cow position:
               
chr23:28529958-28529746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
118, 29
               

               
Conread position:
               
312-522
               

               
Cow position:
               
chr23:7696548-7696747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 103
               

               
Conread position:
               
312-522
               

               
Cow position:
               
chr23:7709780-7709988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 136
               

               
Conread position:
               
312-529
               

               
Cow position:
               
chr23:307445-307673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
312-529
               

               
Cow position:
               
chr23:1655884-1656109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
118, 161
               

               
Conread position:
               
312-529
               

               
Cow position:
               
chr23:5686632-5686421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
118, 151
               

               
Conread position:
               
312-530
               

               
Cow position:
               
chr23:41348634-41348417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
113, 128
               

               
Conread position:
               
312-533
               

               
Cow position:
               
chr23:3890581-3890354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
312-536
               

               
Cow position:
               
chr23:6148046-6147832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
204, 51
               

               
Conread position:
               
312-537
               

               
Cow position:
               
chr23:18739475-18739240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
312-549
               

               
Cow position:
               
chr23:3191135-3190895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
114, 194
               

               
Conread position:
               
313-514
               

               
Cow position:
               
chr23:30311941-30311732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
69, 148
               

               
Conread position:
               
313-518
               

               
Cow position:
               
chr23:35656402-35656611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
117, 48
               

               
Conread position:
               
313-522
               

               
Cow position:
               
chr23:22414309-22414103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
313-528
               

               
Cow position:
               
chr23:34314963-34314740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
109, 82
               

               
Conread position:
               
313-531
               

               
Cow position:
               
chr23:32621274-32621505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
57, 103
               

               
Conread position:
               
313-537
               

               
Cow position:
               
chr23:4090418-4090643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
115, 52
               

               
Conread position:
               
314-452
               

               
Cow position:
               
chr23:20002249-20002384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
314-531
               

               
Cow position:
               
chr23:40738027-40737802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
106, 215
               

               
Conread position:
               
314-534
               

               
Cow position:
               
chr23:19565443-19565663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
317-482
               

               
Cow position:
               
chr23:4501747-4501910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
123, 97
               

               
Conread position:
               
317-512
               

               
Cow position:
               
chr23:21423762-21423962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
317-514
               

               
Cow position:
               
chr23:12405825-12405623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
318-561
               

               
Cow position:
               
chr23:27848992-27849235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 178
               

               
Conread position:
               
319-522
               

               
Cow position:
               
chr23:25968421-25968622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 44
               

               
Conread position:
               
322-523
               

               
Cow position:
               
chr23:204280-204497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
323-531
               

               
Cow position:
               
chr23:9131961-9131750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
5, 149
               

               
Conread position:
               
324-506
               

               
Cow position:
               
chr23:5448124-5447935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
98, 149
               

               
Conread position:
               
327-522
               

               
Cow position:
               
chr23:17012734-17012536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 121
               

               
Conread position:
               
329-518
               

               
Cow position:
               
chr23:24809431-24809235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
329-523
               

               
Cow position:
               
chr23:38854583-38854381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
329-531
               

               
Cow position:
               
chr23:7155686-7155485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
330-518
               

               
Cow position:
               
chr23:22573899-22573704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
97, 8
               

               
Conread position:
               
330-522
               

               
Cow position:
               
chr23:5237412-5237233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
330-530
               

               
Cow position:
               
chr23:1798118-1798335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
330-531
               

               
Cow position:
               
chr23:1954287-1954491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
91, 176
               

               
Conread position:
               
330-531
               

               
Cow position:
               
chr23:10675859-10676072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
330-531
               

               
Cow position:
               
chr23:10888282-10888482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 99
               

               
Conread position:
               
331-522
               

               
Cow position:
               
chr23:39248379-39248194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
140, 90
               

               
Conread position:
               
332-531
               

               
Cow position:
               
chr23:1510915-1510711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
332-537
               

               
Cow position:
               
chr23:5603736-5603527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
94, 193
               

               
Conread position:
               
333-532
               

               
Cow position:
               
chr23:1532913-1533115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 136
               

               
Conread position:
               
333-534
               

               
Cow position:
               
chr23:17392633-17392827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
183, 30
               

               
Conread position:
               
334-485
               

               
Cow position:
               
chr23:14191785-14191939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
334-506
               

               
Cow position:
               
chr23:36022773-36022602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
334-509
               

               
Cow position:
               
chr23:17484834-17484664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
334-517
               

               
Cow position:
               
chr23:1680322-1680490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
334-518
               

               
Cow position:
               
chr23:6179534-6179346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
88, 160
               

               
Conread position:
               
334-526
               

               
Cow position:
               
chr23:36200416-36200609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
335-522
               

               
Cow position:
               
chr23:4979268-4979077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
92, 7
               

               
Conread position:
               
335-531
               

               
Cow position:
               
chr23:24718789-24718588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
337-510
               

               
Cow position:
               
chr23:5927601-5927428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 45
               

               
Conread position:
               
337-519
               

               
Cow position:
               
chr23:5461325-5461158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
134, 91
               

               
Conread position:
               
337-524
               

               
Cow position:
               
chr23:26698457-26698274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 94
               

               
Conread position:
               
337-531
               

               
Cow position:
               
chr23:11369243-11369435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
93, 34
               

               
Conread position:
               
337-534
               

               
Cow position:
               
chr23:3896009-3895803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 77
               

               
Conread position:
               
337-542
               

               
Cow position:
               
chr23:22826426-22826230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
337-560
               

               
Cow position:
               
chr23:809520-809754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
339-519
               

               
Cow position:
               
chr23:28814392-28814582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
341-522
               

               
Cow position:
               
chr23:11053877-11053691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
342-532
               

               
Cow position:
               
chr23:33232682-33232484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
344-518
               

               
Cow position:
               
chr23:21628182-21628366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
344-522
               

               
Cow position:
               
chr23:1480661-1480848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
344-523
               

               
Cow position:
               
chr23:18417114-18417283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
82, 105
               

               
Conread position:
               
344-529
               

               
Cow position:
               
chr23:16877028-16877214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
344-531
               

               
Cow position:
               
chr23:35239373-35239568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
344-538
               

               
Cow position:
               
chr23:25883988-25884188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
344-546
               

               
Cow position:
               
chr23:1276875-1277075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
171, 96
               

               
Conread position:
               
345-521
               

               
Cow position:
               
chr23:10815932-10815752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
345-538
               

               
Cow position:
               
chr23:2395575-2395376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
345-543
               

               
Cow position:
               
chr23:29330330-29330538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
346-487
               

               
Cow position:
               
chr23:19935233-19935090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
346-502
               

               
Cow position:
               
chr23:24513903-24514048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
346-523
               

               
Cow position:
               
chr23:23104463-23104283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
346-529
               

               
Cow position:
               
chr23:4416264-4416070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
82, 68
               

               
Conread position:
               
346-537
               

               
Cow position:
               
chr23:18489680-18489874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
347-524
               

               
Cow position:
               
chr23:9876974-9876792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 179
               

               
Conread position:
               
347-531
               

               
Cow position:
               
chr23:16664377-16664191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
80, 179
               

               
Conread position:
               
347-531
               

               
Cow position:
               
chr23:28580562-28580364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
348-482
               

               
Cow position:
               
chr23:14753261-14753396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
97, 71
               

               
Conread position:
               
350-514
               

               
Cow position:
               
chr23:15056544-15056378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 93
               

               
Conread position:
               
350-514
               

               
Cow position:
               
chr23:21638404-21638571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
351-522
               

               
Cow position:
               
chr23:18822404-18822226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
80, 12
               

               
Conread position:
               
351-531
               

               
Cow position:
               
chr23:13410727-13410547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 157
               

               
Conread position:
               
351-543
               

               
Cow position:
               
chr23:24689315-24689511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
351-545
               

               
Cow position:
               
chr23:1490390-1490584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
145, 9
               

               
Conread position:
               
352-521
               

               
Cow position:
               
chr23:5215887-5215707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
56, 46
               

               
Conread position:
               
352-538
               

               
Cow position:
               
chr23:30617449-30617252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
353-528
               

               
Cow position:
               
chr23:33702364-33702178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
354-531
               

               
Cow position:
               
chr23:4291386-4291573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
354-531
               

               
Cow position:
               
chr23:5642329-5642143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
355-522
               

               
Cow position:
               
chr23:20725655-20725485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
355-522
               

               
Cow position:
               
chr23:31753283-31753439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
355-531
               

               
Cow position:
               
chr23:1916213-1916388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 138
               

               
Conread position:
               
355-547
               

               
Cow position:
               
chr23:38732277-38732455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
357-506
               

               
Cow position:
               
chr23:61917-61772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 101
               

               
Conread position:
               
357-531
               

               
Cow position:
               
chr23:2046981-2047153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
130, 85
               

               
Conread position:
               
357-546
               

               
Cow position:
               
chr23:4338312-4338118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
54, 185
               

               
Conread position:
               
359-536
               

               
Cow position:
               
chr23:22654650-22654477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
157, 71
               

               
Conread position:
               
363-529
               

               
Cow position:
               
chr23:4802999-4803178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
363-531
               

               
Cow position:
               
chr23:22205550-22205382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
151, 51
               

               
Conread position:
               
365-531
               

               
Cow position:
               
chr23:5699146-5698977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
369-522
               

               
Cow position:
               
chr23:16968091-16968247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 143
               

               
Conread position:
               
371-514
               

               
Cow position:
               
chr23:4042504-4042647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 78
               

               
Conread position:
               
371-522
               

               
Cow position:
               
chr23:3917816-3917664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
371-522
               

               
Cow position:
               
chr23:25933206-25933355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
59, 81
               

               
Conread position:
               
371-522
               

               
Cow position:
               
chr23:40965933-40965773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
371-526
               

               
Cow position:
               
chr23:2801386-2801221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
371-531
               

               
Cow position:
               
chr23:20397420-20397252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 36
               

               
Conread position:
               
371-533
               

               
Cow position:
               
chr23:5605307-5605482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
371-533
               

               
Cow position:
               
chr23:5612567-5612742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
371-537
               

               
Cow position:
               
chr23:40348596-40348427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 155
               

               
Conread position:
               
371-538
               

               
Cow position:
               
chr23:17282014-17282184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 59
               

               
Conread position:
               
371-540
               

               
Cow position:
               
chr23:4521836-4521657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
371-550
               

               
Cow position:
               
chr23:15099881-15099691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 177
               

               
Conread position:
               
371-560
               

               
Cow position:
               
chr23:20272083-20271889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 43
               

               
Conread position:
               
373-512
               

               
Cow position:
               
chr23:41477929-41478072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
376-522
               

               
Cow position:
               
chr23:26975411-26975259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
376-543
               

               
Cow position:
               
chr23:3297916-3298086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
376-543
               

               
Cow position:
               
chr23:30867246-30867074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
377-522
               

               
Cow position:
               
chr23:18597064-18596916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
378-523
               

               
Cow position:
               
chr23:23034383-23034233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
381-522
               

               
Cow position:
               
chr23:2511204-2511351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
382-523
               

               
Cow position:
               
chr23:3568499-3568357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
382-524
               

               
Cow position:
               
chr23:18710399-18710264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
382-530
               

               
Cow position:
               
chr23:1661569-1661422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
48, 138
               

               
Conread position:
               
382-532
               

               
Cow position:
               
chr23:2563722-2563882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 32
               

               
Conread position:
               
382-536
               

               
Cow position:
               
chr23:22651466-22651619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
385-519
               

               
Cow position:
               
chr23:1891412-1891279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
388-546
               

               
Cow position:
               
chr23:16564134-16564295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
401-524
               

               
Cow position:
               
chr23:18204485-18204612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
402-531
               

               
Cow position:
               
chr23:23033453-23033325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
402-537
               

               
Cow position:
               
chr23:20542782-20542914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
409-528
               

               
Cow position:
               
chr23:399444-399325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
409-531
               

               
Cow position:
               
chr23:23103239-23103111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
426-530
               

               
Cow position:
               
chr23:18354785-18354889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.