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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8033E16.3
        

               
Conread position:
               
1-99
               

               
Cow position:
               
chr25:11540768-11540864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-105
               

               
Cow position:
               
chr25:16044929-16044827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-107
               

               
Cow position:
               
chr25:23325348-23325244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-108
               

               
Cow position:
               
chr25:19570741-19570637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-114
               

               
Cow position:
               
chr25:14284113-14284002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr25:18658560-18658675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr25:20652317-20652201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-125
               

               
Cow position:
               
chr25:27510603-27510480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 54
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr25:2624298-2624435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr25:10013730-10013592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr25:30268023-30268168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr25:36962336-36962188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
75, 110
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr25:17553608-17553456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr25:21017817-21017665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr25:36124355-36124507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr25:21041476-21041633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
140, 35
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr25:32278374-32278212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr25:14720140-14720301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr25:17992486-17992323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr25:20790038-20789883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr25:11315284-11315449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr25:33901722-33901548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
117, 79
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr25:31064826-31064994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr25:5052-5232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr25:5611468-5611652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 77
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr25:4119324-4119511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
171, 79
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr25:12807849-12807660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
116, 79
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr25:7259203-7259398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
121, 88
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr25:4860792-4860594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:2453938-2453740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
151, 68
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:4857837-4857640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:5461830-5462027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:10158402-10158599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:11294448-11294647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:18271916-18272114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
115, 79
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:18610704-18610895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:26187876-26187680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:26791689-26791881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
115, 39
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr25:26896695-26896890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr25:13132422-13132617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
175, 33
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr25:6421396-6421195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr25:34156329-34156533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
174, 87
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr25:5604584-5604387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
203, 67
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr25:7732618-7732825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
129, 76
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr25:24668968-24668759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
200, 89
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr25:13553568-13553775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr25:18240808-18241022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr25:29802084-29801869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr25:9532305-9532522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
117, 85
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr25:6118185-6117970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
125, 20
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr25:22730305-22730504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr25:4161375-4161595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
201, 76
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr25:4188401-4188178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr25:16691159-16691391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr25:33687243-33687020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr25:10580433-10580202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
108, 79
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr25:36633327-36633107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
223, 23
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr25:35655217-35655439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr25:11051038-11051256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 79
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr25:22277608-22277383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr25:8655950-8656179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
222, 86
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr25:17585278-17585048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
116, 54
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr25:20434210-20434433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr25:32514187-32513958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
126, 82
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr25:38569939-38569718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
217, 60
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr25:4488391-4488610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr25:26225384-26225160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
218, 81
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr25:12063982-12063752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
195, 76
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr25:4049690-4049914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
216, 27
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr25:12318184-12317952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr25:13429470-13429250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr25:17659885-17660117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
144, 38
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr25:23601283-23601051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr25:24654514-24654285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr25:24727130-24726900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 20
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr25:28327439-28327209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 80
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr25:30817233-30817460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
216, 17
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr25:36351399-36351631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
206, 79
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr25:18090577-18090810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
206, 86
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr25:18082379-18082147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
157, 77
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr25:24663340-24663111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr25:26869815-26870051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
66, 71
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr25:27424086-27423856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
197, 60
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr25:11044298-11044526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
119, 77
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr25:16136811-16137042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:3167524-3167287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:5536993-5536756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:7717600-7717835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:8235585-8235348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:10896072-10895835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:12157538-12157775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:17037111-17037348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:17808122-17807885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:17993863-17993626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:17994637-17994401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:18044845-18044608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:18155251-18155488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 78
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:18236718-18236481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:19138912-19138675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:19912886-19912650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:21121240-21121477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
131, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:22198242-22198479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:23334667-23334904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:26319401-26319638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:26940027-26940264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
117, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:27076718-27076955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:27146092-27146334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
125, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:29383672-29383435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:29525207-29524970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:35589730-35589967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:35602087-35602324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:35649493-35649730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr25:38910191-38910428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr25:15412681-15412919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr25:23013868-23014111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr25:10367031-10366800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr25:36871514-36871754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr25:26407855-26408095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
231, 70
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr25:31586695-31586936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
228, 86
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr25:23410320-23410558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 65
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr25:12176543-12176298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 86
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr25:6967116-6966873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
164, 81
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr25:34163901-34163660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
121, 78
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr25:17426913-17427161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr25:4897752-4897998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
115, 78
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr25:10698809-10699058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
124, 86
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr25:16560935-16560692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
231, 79
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr25:27017337-27017088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr25:16738286-16738037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
169, 60
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr25:2046896-2046656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr25:5271242-5271496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 80
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr25:8572215-8571963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
119, 77
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr25:34672938-34672686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
116, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:380326-380074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
200, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:3140961-3141214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
121, 86
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:5539077-5539326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 80
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:9414783-9415036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:11097363-11097616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
121, 86
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:12750508-12750251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 86
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:13840462-13840209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 39
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:13955729-13955476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:13967009-13966756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:14103952-14104189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
217, 65
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:14954370-14954118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
199, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:17659212-17659470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:18181769-18182021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
202, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:18323698-18323445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 86
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:22412824-22412574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
109, 82
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:26618108-26618361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:26682220-26682473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:26923504-26923757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
197, 86
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr25:29198985-29199233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
113, 79
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr25:17682120-17681869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
10, 81
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr25:12359861-12360116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 90
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr25:16409077-16408821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
179, 79
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:2511053-2510797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:14555328-14555584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:18885825-18885576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:19586679-19586423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:25873332-25873076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr25:27621737-27621995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 110
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr25:20771678-20771421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr25:14570021-14570278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 84
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr25:5514664-5514922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 65
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr25:5792147-5791888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
211, 30
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr25:9641999-9642267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 116
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr25:41354646-41354395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
220, 58
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr25:14225141-14224890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
40, 35
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr25:16688595-16688337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr25:8485877-8485617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
214, 68
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr25:9842660-9842916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr25:33839043-33839295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
230, 86
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:10011064-10010802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 84
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr25:6470561-6470288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 86
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr25:14274096-14274373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 79
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr25:23389617-23389350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 68
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr25:27868466-27868732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
231, 37
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr25:6021625-6021904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
202, 79
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr25:20650922-20651217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 9
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr25:35608071-35607777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr25:33589748-33589451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr25:6740475-6740765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
231, 79
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr25:16067917-16068213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 66
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr25:36392308-36392010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 20
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr25:38439816-38440113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 187
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr25:395012-395304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
217, 63
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr25:10137761-10138042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 69
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr25:12824374-12824068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
76, 197
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr25:15319584-15319870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 33
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr25:24136788-24136488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr25:26111937-26112219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
232, 79
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr25:31733077-31732782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 35
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr25:11269543-11269248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr25:36127244-36126944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr25:11054585-11054860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
272, 47
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr25:1096232-1096531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 86
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr25:25827116-25827430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 111
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr25:39386176-39385867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr25:22314856-22315162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 78
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr25:7800791-7801106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 88
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr25:15618356-15618677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr25:25479977-25479672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
83, 112
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr25:28272970-28273291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 89
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr25:36765640-36765326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 79
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr25:12171120-12171427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
222, 66
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr25:20394862-20395163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
243, 79
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr25:27593955-27594272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 90
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr25:12235101-12234790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
217, 78
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr25:41387854-41387547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
220, 70
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr25:37687502-37687201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
273, 67
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr25:7069181-7069501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
120, 85
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr25:35339990-35340303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 63
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr25:3689070-3689397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr25:8482658-8482328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 86
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr25:19531040-19531367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr25:27143277-27142949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
50, 87
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr25:32609759-32609432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr25:33990009-33989682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr25:34121433-34121106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
120, 87
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr25:34343243-34342916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
125, 86
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:13787606-13787941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
123, 86
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:13960722-13961053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
213, 83
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:26353107-26352784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
117, 83
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:26881871-26882212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
131, 79
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:28274788-28274462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
231, 75
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:34502026-34501695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
109, 79
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:35446601-35446924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:35567231-35566895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 78
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr25:41356142-41355806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr25:35554329-35554678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 95
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr25:7608973-7609310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr25:12208146-12208485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
195, 86
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr25:19339468-19339806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
121, 78
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr25:12239481-12239148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
217, 24
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr25:13446265-13445920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
124, 80
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr25:41097538-41097188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
191, 292
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr25:34013099-34012753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
217, 78
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr25:23351051-23351402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 79
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr25:26756128-26756493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr25:6891872-6891503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 185
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr25:6606703-6606334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
109, 80
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr25:12943370-12942979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
197, 79
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr25:13333078-13333477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
81, 102
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr25:598987-599375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 62
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr25:15005861-15006252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
222, 68
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr25:9349602-9349199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 78
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr25:26282685-26283116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
213, 79
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr25:34659449-34659012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 79
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr25:20496195-20496634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 35
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr25:32191324-32191753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 69
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr25:41351547-41351120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
139, 30
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr25:37469433-37469839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
307, 108
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr25:19924179-19924628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
119, 27
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr25:21209291-21208855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 69
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr25:11830239-11829809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 25
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr25:18564148-18564606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 90
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr25:4548067-4547599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr25:36761771-36762226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 39
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr25:38981762-38982220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 114
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr25:26238524-26238991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr25:3145501-3145981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 82
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr25:16064553-16065049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 55
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr25:787928-788427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 8
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr25:35077006-35076544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 86
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr25:11662160-11661648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 73
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr25:6683405-6682864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 20
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr25:10504681-10504147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr25:17658270-17658807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 86
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr25:20007776-20008332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 198
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr25:36746791-36746251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 96
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr25:37594053-37594583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
90, 189
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr25:11956482-11957004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 78
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr25:26654563-26655092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 17
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr25:2110739-2111237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 37
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr25:11666322-11666827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
233, 68
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr25:20060373-20059844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 68
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr25:8576355-8576876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
264, 36
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr25:9055860-9056358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
221, 75
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr25:20069379-20069914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 86
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr25:13325257-13325773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 87
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chr25:21193288-21192736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 86
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr25:5847140-5846594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 48
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr25:7641793-7641247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 34
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr25:16922137-16921583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 88
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr25:2136019-2136566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 37
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr25:2414492-2415007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 64
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr25:5341306-5341825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 79
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr25:11585168-11585740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 25
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr25:14834013-14833458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr25:33959604-33959042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 37
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr25:35347558-35348117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
1-532
               

               
Cow position:
               
chr25:4680895-4681416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 37
               

               
Conread position:
               
1-532
               

               
Cow position:
               
chr25:10657382-10656822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 190
               

               
Conread position:
               
1-532
               

               
Cow position:
               
chr25:30279553-30278985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 88
               

               
Conread position:
               
1-533
               

               
Cow position:
               
chr25:21191145-21191690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 68
               

               
Conread position:
               
1-534
               

               
Cow position:
               
chr25:11437147-11436613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
254, 80
               

               
Conread position:
               
1-534
               

               
Cow position:
               
chr25:15273345-15273877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 77
               

               
Conread position:
               
1-538
               

               
Cow position:
               
chr25:26087171-26087741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 37
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr25:8120432-8120996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 82
               

               
Conread position:
               
1-543
               

               
Cow position:
               
chr25:24572727-24573280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 83
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr25:3992445-3993006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 86
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr25:10643653-10643093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 61
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr25:30319794-30319217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 86
               

               
Conread position:
               
1-548
               

               
Cow position:
               
chr25:18294660-18294085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 92
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr25:6464373-6463787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 49
               

               
Conread position:
               
2-169
               

               
Cow position:
               
chr25:17191474-17191310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
2-196
               

               
Cow position:
               
chr25:12459655-12459846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr25:29336147-29336358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr25:27231995-27232208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr25:35585864-35585637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
216, 90
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr25:13067326-13067090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
125, 85
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr25:36119858-36120107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr25:16866894-16867141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 32
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr25:20403063-20402801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 77
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr25:36554661-36554954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
125, 85
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr25:25866591-25866884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr25:26757087-26757416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
79, 169
               

               
Conread position:
               
2-330
               

               
Cow position:
               
chr25:7445810-7446138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 12
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr25:30852430-30852749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
223, 75
               

               
Conread position:
               
2-374
               

               
Cow position:
               
chr25:1735654-1735274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 77
               

               
Conread position:
               
2-452
               

               
Cow position:
               
chr25:33256026-33256480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 54
               

               
Conread position:
               
2-514
               

               
Cow position:
               
chr25:18448494-18448985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
2-522
               

               
Cow position:
               
chr25:7216478-7217018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
2-527
               

               
Cow position:
               
chr25:18490731-18491244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
421, 47
               

               
Conread position:
               
2-529
               

               
Cow position:
               
chr25:14791412-14791962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 67
               

               
Conread position:
               
2-531
               

               
Cow position:
               
chr25:4522161-4521633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 78
               

               
Conread position:
               
2-532
               

               
Cow position:
               
chr25:1837899-1838459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 66
               

               
Conread position:
               
3-118
               

               
Cow position:
               
chr25:14118412-14118525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
3-126
               

               
Cow position:
               
chr25:6961520-6961401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr25:17119528-17119318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr25:13720883-13720656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
3-242
               

               
Cow position:
               
chr25:30816483-30816725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 11
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr25:8231225-8230978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
214, 78
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr25:11056536-11056778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
117, 61
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr25:26938599-26938319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
8, 47
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr25:41107418-41107667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 44
               

               
Conread position:
               
3-292
               

               
Cow position:
               
chr25:23945857-23945571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
107, 78
               

               
Conread position:
               
3-295
               

               
Cow position:
               
chr25:9396112-9396397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 73
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr25:34257645-34257969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
118, 84
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr25:28863532-28863866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
211, 76
               

               
Conread position:
               
3-440
               

               
Cow position:
               
chr25:20076155-20076611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
140, 47
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr25:13569510-13569053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 86
               

               
Conread position:
               
4-99
               

               
Cow position:
               
chr25:7032628-7032721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
4-100
               

               
Cow position:
               
chr25:18487134-18487228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr25:11970173-11969940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
225, 74
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr25:12204127-12204381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
4-292
               

               
Cow position:
               
chr25:26849390-26849095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 76
               

               
Conread position:
               
4-330
               

               
Cow position:
               
chr25:25510553-25510883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
216, 71
               

               
Conread position:
               
4-459
               

               
Cow position:
               
chr25:21245948-21245471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 83
               

               
Conread position:
               
4-462
               

               
Cow position:
               
chr25:21950784-21951264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 80
               

               
Conread position:
               
4-505
               

               
Cow position:
               
chr25:23829451-23828946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 31
               

               
Conread position:
               
4-518
               

               
Cow position:
               
chr25:25754337-25753828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 79
               

               
Conread position:
               
5-123
               

               
Cow position:
               
chr25:39313231-39313113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-158
               

               
Cow position:
               
chr25:13122601-13122750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
5-192
               

               
Cow position:
               
chr25:13412088-13412274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
103, 72
               

               
Conread position:
               
5-219
               

               
Cow position:
               
chr25:14960041-14959830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
203, 82
               

               
Conread position:
               
5-220
               

               
Cow position:
               
chr25:32116938-32116726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr25:9625469-9625696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
112, 13
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr25:33025421-33025201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
220, 72
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr25:30621366-30621132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 19
               

               
Conread position:
               
5-252
               

               
Cow position:
               
chr25:26911097-26910855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
227, 74
               

               
Conread position:
               
5-253
               

               
Cow position:
               
chr25:35617797-35618041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
213, 7
               

               
Conread position:
               
5-256
               

               
Cow position:
               
chr25:17354038-17354283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
84, 186
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr25:21562289-21562030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
171, 20
               

               
Conread position:
               
5-269
               

               
Cow position:
               
chr25:40657958-40658221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
49, 89
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr25:10748841-10748573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
230, 75
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr25:36779155-36779448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
220, 75
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr25:23672217-23671940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
5-295
               

               
Cow position:
               
chr25:23739592-23739314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
5-423
               

               
Cow position:
               
chr25:5756350-5756780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
80, 189
               

               
Conread position:
               
5-428
               

               
Cow position:
               
chr25:10012394-10011958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
5-452
               

               
Cow position:
               
chr25:22530946-22531409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 74
               

               
Conread position:
               
5-537
               

               
Cow position:
               
chr25:18000868-18000333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
43, 58
               

               
Conread position:
               
6-200
               

               
Cow position:
               
chr25:3969056-3969247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr25:29308895-29309112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
212, 45
               

               
Conread position:
               
6-236
               

               
Cow position:
               
chr25:33112352-33112111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 221
               

               
Conread position:
               
6-287
               

               
Cow position:
               
chr25:24227680-24227395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
69, 135
               

               
Conread position:
               
6-362
               

               
Cow position:
               
chr25:38972493-38972851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
212, 71
               

               
Conread position:
               
6-501
               

               
Cow position:
               
chr25:37637994-37637481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 71
               

               
Conread position:
               
7-237
               

               
Cow position:
               
chr25:13062518-13062749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
114, 80
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr25:20625268-20624983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
211, 72
               

               
Conread position:
               
7-306
               

               
Cow position:
               
chr25:40388795-40388500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 104
               

               
Conread position:
               
7-531
               

               
Cow position:
               
chr25:33664233-33663694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 19
               

               
Conread position:
               
7-543
               

               
Cow position:
               
chr25:10407757-10407187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 80
               

               
Conread position:
               
8-198
               

               
Cow position:
               
chr25:16957496-16957306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
100, 68
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr25:14891559-14891774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
125, 69
               

               
Conread position:
               
9-443
               

               
Cow position:
               
chr25:27531605-27531152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 87
               

               
Conread position:
               
10-176
               

               
Cow position:
               
chr25:9634587-9634747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
10-207
               

               
Cow position:
               
chr25:19585675-19585481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
10-253
               

               
Cow position:
               
chr25:23738790-23738546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
117, 77
               

               
Conread position:
               
10-261
               

               
Cow position:
               
chr25:2498927-2499175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
10-261
               

               
Cow position:
               
chr25:41385442-41385191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
212, 71
               

               
Conread position:
               
11-251
               

               
Cow position:
               
chr25:41392999-41392758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
11-294
               

               
Cow position:
               
chr25:9957369-9957088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
207, 150
               

               
Conread position:
               
11-433
               

               
Cow position:
               
chr25:36037125-36036673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 184
               

               
Conread position:
               
11-532
               

               
Cow position:
               
chr25:26523644-26524173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 69
               

               
Conread position:
               
12-218
               

               
Cow position:
               
chr25:10212163-10212366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
12-253
               

               
Cow position:
               
chr25:6948388-6948150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
186, 68
               

               
Conread position:
               
12-295
               

               
Cow position:
               
chr25:2126135-2126418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
206, 66
               

               
Conread position:
               
13-518
               

               
Cow position:
               
chr25:6803231-6803745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 74
               

               
Conread position:
               
14-251
               

               
Cow position:
               
chr25:10637838-10637600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
107, 66
               

               
Conread position:
               
15-237
               

               
Cow position:
               
chr25:29352256-29352032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
16-233
               

               
Cow position:
               
chr25:13761278-13761488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
17-177
               

               
Cow position:
               
chr25:16802117-16802273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
18-251
               

               
Cow position:
               
chr25:12359222-12359452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
137, 60
               

               
Conread position:
               
18-306
               

               
Cow position:
               
chr25:16039167-16038874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
18-409
               

               
Cow position:
               
chr25:17598823-17598411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
19-173
               

               
Cow position:
               
chr25:20133737-20133591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
19-225
               

               
Cow position:
               
chr25:14823072-14822872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
199, 19
               

               
Conread position:
               
19-233
               

               
Cow position:
               
chr25:12541126-12541335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
187, 51
               

               
Conread position:
               
19-314
               

               
Cow position:
               
chr25:15694656-15694955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 64
               

               
Conread position:
               
20-237
               

               
Cow position:
               
chr25:17538739-17538521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
107, 67
               

               
Conread position:
               
20-409
               

               
Cow position:
               
chr25:6886294-6885889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
198, 53
               

               
Conread position:
               
21-259
               

               
Cow position:
               
chr25:17418858-17419097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
100, 66
               

               
Conread position:
               
22-237
               

               
Cow position:
               
chr25:9931749-9931966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 66
               

               
Conread position:
               
22-292
               

               
Cow position:
               
chr25:9847462-9847738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
187, 31
               

               
Conread position:
               
22-452
               

               
Cow position:
               
chr25:6424905-6424492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 35
               

               
Conread position:
               
23-205
               

               
Cow position:
               
chr25:7687895-7687715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
23-249
               

               
Cow position:
               
chr25:32848648-32848422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
183, 66
               

               
Conread position:
               
23-530
               

               
Cow position:
               
chr25:17975690-17975193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 63
               

               
Conread position:
               
24-434
               

               
Cow position:
               
chr25:22910169-22909749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr25:18073231-18073444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
96, 62
               

               
Conread position:
               
25-253
               

               
Cow position:
               
chr25:16231445-16231219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
177, 46
               

               
Conread position:
               
25-437
               

               
Cow position:
               
chr25:20460810-20461215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
26-237
               

               
Cow position:
               
chr25:12753237-12753025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
26-532
               

               
Cow position:
               
chr25:12097522-12098045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 49
               

               
Conread position:
               
27-200
               

               
Cow position:
               
chr25:22346331-22346495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
27-233
               

               
Cow position:
               
chr25:41044498-41044700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
173, 11
               

               
Conread position:
               
27-426
               

               
Cow position:
               
chr25:25051703-25051278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 60
               

               
Conread position:
               
27-488
               

               
Cow position:
               
chr25:15714560-15715039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
27-532
               

               
Cow position:
               
chr25:27821091-27821643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 60
               

               
Conread position:
               
28-237
               

               
Cow position:
               
chr25:7762929-7763139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
93, 59
               

               
Conread position:
               
28-348
               

               
Cow position:
               
chr25:9023327-9023638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
238, 59
               

               
Conread position:
               
29-292
               

               
Cow position:
               
chr25:15391645-15391377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 51
               

               
Conread position:
               
31-249
               

               
Cow position:
               
chr25:15368361-15368579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
187, 171
               

               
Conread position:
               
31-260
               

               
Cow position:
               
chr25:13708702-13708924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
201, 48
               

               
Conread position:
               
31-260
               

               
Cow position:
               
chr25:32063515-32063759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
31-518
               

               
Cow position:
               
chr25:23053242-23053760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 7
               

               
Conread position:
               
33-533
               

               
Cow position:
               
chr25:22241693-22242163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
204, 12
               

               
Conread position:
               
34-233
               

               
Cow position:
               
chr25:21961318-21961123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
184, 53
               

               
Conread position:
               
34-410
               

               
Cow position:
               
chr25:12817061-12817448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 53
               

               
Conread position:
               
38-184
               

               
Cow position:
               
chr25:27521292-27521159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
38-253
               

               
Cow position:
               
chr25:18968964-18969180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
180, 49
               

               
Conread position:
               
38-304
               

               
Cow position:
               
chr25:8347201-8347470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 49
               

               
Conread position:
               
38-522
               

               
Cow position:
               
chr25:18721416-18720926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
39-212
               

               
Cow position:
               
chr25:10357705-10357537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 7
               

               
Conread position:
               
39-233
               

               
Cow position:
               
chr25:40321615-40321406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 91
               

               
Conread position:
               
39-330
               

               
Cow position:
               
chr25:23407151-23406851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
40-200
               

               
Cow position:
               
chr25:21069031-21068874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
40-214
               

               
Cow position:
               
chr25:16044911-16045087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 49
               

               
Conread position:
               
40-292
               

               
Cow position:
               
chr25:29561658-29561911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
192, 45
               

               
Conread position:
               
40-428
               

               
Cow position:
               
chr25:25961656-25962042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
178, 162
               

               
Conread position:
               
41-330
               

               
Cow position:
               
chr25:16242274-16241979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
191, 46
               

               
Conread position:
               
42-237
               

               
Cow position:
               
chr25:14351994-14352190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
42-237
               

               
Cow position:
               
chr25:16977499-16977692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
156, 45
               

               
Conread position:
               
42-292
               

               
Cow position:
               
chr25:10366055-10365803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 8
               

               
Conread position:
               
44-516
               

               
Cow position:
               
chr25:16319428-16318955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 45
               

               
Conread position:
               
46-261
               

               
Cow position:
               
chr25:6474400-6474185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 70
               

               
Conread position:
               
49-249
               

               
Cow position:
               
chr25:6775097-6774897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
164, 24
               

               
Conread position:
               
49-260
               

               
Cow position:
               
chr25:25948692-25948488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
183, 41
               

               
Conread position:
               
50-200
               

               
Cow position:
               
chr25:17006063-17005915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
50-237
               

               
Cow position:
               
chr25:15274826-15275018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 90
               

               
Conread position:
               
50-261
               

               
Cow position:
               
chr25:448641-448433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
182, 26
               

               
Conread position:
               
51-253
               

               
Cow position:
               
chr25:8133244-8133441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
181, 34
               

               
Conread position:
               
51-298
               

               
Cow position:
               
chr25:34618399-34618149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
52-421
               

               
Cow position:
               
chr25:6226747-6227129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 35
               

               
Conread position:
               
52-457
               

               
Cow position:
               
chr25:14117815-14118219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 35
               

               
Conread position:
               
55-183
               

               
Cow position:
               
chr25:22549905-22549778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
91, 32
               

               
Conread position:
               
55-278
               

               
Cow position:
               
chr25:21024507-21024284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
146, 32
               

               
Conread position:
               
55-288
               

               
Cow position:
               
chr25:10746602-10746843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
55-335
               

               
Cow position:
               
chr25:13315885-13315600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 32
               

               
Conread position:
               
57-306
               

               
Cow position:
               
chr25:21096813-21096562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
58-199
               

               
Cow position:
               
chr25:25581522-25581650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
58-515
               

               
Cow position:
               
chr25:11139352-11139835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
59-261
               

               
Cow position:
               
chr25:21895174-21894975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
60-256
               

               
Cow position:
               
chr25:10867436-10867240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
62-261
               

               
Cow position:
               
chr25:20348574-20348773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
156, 24
               

               
Conread position:
               
62-281
               

               
Cow position:
               
chr25:12195609-12195395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
156, 17
               

               
Conread position:
               
62-447
               

               
Cow position:
               
chr25:14196569-14196984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 374
               

               
Conread position:
               
63-194
               

               
Cow position:
               
chr25:23920136-23920006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
63-208
               

               
Cow position:
               
chr25:36363279-36363422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
63-315
               

               
Cow position:
               
chr25:10330677-10330438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 24
               

               
Conread position:
               
63-391
               

               
Cow position:
               
chr25:25783355-25783686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
150, 21
               

               
Conread position:
               
63-506
               

               
Cow position:
               
chr25:20023682-20023209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 406
               

               
Conread position:
               
64-529
               

               
Cow position:
               
chr25:5834535-5834033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
149, 15
               

               
Conread position:
               
65-313
               

               
Cow position:
               
chr25:15412057-15411799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
67-246
               

               
Cow position:
               
chr25:19366688-19366522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
151, 20
               

               
Conread position:
               
67-253
               

               
Cow position:
               
chr25:15433526-15433710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
165, 11
               

               
Conread position:
               
67-403
               

               
Cow position:
               
chr25:27504464-27504122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
50, 10
               

               
Conread position:
               
67-440
               

               
Cow position:
               
chr25:38850769-38850377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 20
               

               
Conread position:
               
68-287
               

               
Cow position:
               
chr25:33457429-33457653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
165, 8
               

               
Conread position:
               
70-537
               

               
Cow position:
               
chr25:12261170-12260668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 17
               

               
Conread position:
               
71-523
               

               
Cow position:
               
chr25:36081600-36082070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 16
               

               
Conread position:
               
72-261
               

               
Cow position:
               
chr25:40151125-40151307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
146, 18
               

               
Conread position:
               
73-358
               

               
Cow position:
               
chr25:6003268-6002976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
12, 245
               

               
Conread position:
               
76-215
               

               
Cow position:
               
chr25:8961191-8961326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
76-233
               

               
Cow position:
               
chr25:17712262-17712414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
142, 109
               

               
Conread position:
               
76-239
               

               
Cow position:
               
chr25:7440583-7440740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
103, 110
               

               
Conread position:
               
76-245
               

               
Cow position:
               
chr25:14191568-14191396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
76-291
               

               
Cow position:
               
chr25:11131313-11131529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
143, 44
               

               
Conread position:
               
76-292
               

               
Cow position:
               
chr25:18013128-18013352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
76-315
               

               
Cow position:
               
chr25:35625443-35625213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
142, 41
               

               
Conread position:
               
76-372
               

               
Cow position:
               
chr25:18130803-18131109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
142, 18
               

               
Conread position:
               
76-425
               

               
Cow position:
               
chr25:35344766-35345108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
142, 100
               

               
Conread position:
               
76-444
               

               
Cow position:
               
chr25:23917570-23917960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
76-492
               

               
Cow position:
               
chr25:6237851-6238296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
76-526
               

               
Cow position:
               
chr25:9990361-9989897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 13
               

               
Conread position:
               
77-222
               

               
Cow position:
               
chr25:11823796-11823654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
77-233
               

               
Cow position:
               
chr25:27510500-27510351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
77-253
               

               
Cow position:
               
chr25:18310530-18310708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
139, 92
               

               
Conread position:
               
77-253
               

               
Cow position:
               
chr25:18474903-18475085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
77-269
               

               
Cow position:
               
chr25:24168167-24167982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
141, 13
               

               
Conread position:
               
77-306
               

               
Cow position:
               
chr25:5837237-5837001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
144, 179
               

               
Conread position:
               
77-313
               

               
Cow position:
               
chr25:24406011-24405764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 123
               

               
Conread position:
               
77-347
               

               
Cow position:
               
chr25:18935146-18934877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 116
               

               
Conread position:
               
77-523
               

               
Cow position:
               
chr25:10156322-10156755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 14
               

               
Conread position:
               
77-525
               

               
Cow position:
               
chr25:38135476-38135957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
34, 114
               

               
Conread position:
               
77-531
               

               
Cow position:
               
chr25:8512362-8511901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
141, 37
               

               
Conread position:
               
77-531
               

               
Cow position:
               
chr25:20785852-20785375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 40
               

               
Conread position:
               
78-253
               

               
Cow position:
               
chr25:9596356-9596533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
78-293
               

               
Cow position:
               
chr25:34668975-34669195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
122, 14
               

               
Conread position:
               
78-522
               

               
Cow position:
               
chr25:35612571-35612098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 96
               

               
Conread position:
               
79-315
               

               
Cow position:
               
chr25:13642585-13642341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
141, 94
               

               
Conread position:
               
79-444
               

               
Cow position:
               
chr25:21266737-21267107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
63, 110
               

               
Conread position:
               
79-517
               

               
Cow position:
               
chr25:22297286-22296817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 92
               

               
Conread position:
               
80-314
               

               
Cow position:
               
chr25:30035284-30035521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
80-315
               

               
Cow position:
               
chr25:14266770-14266541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
138, 35
               

               
Conread position:
               
80-452
               

               
Cow position:
               
chr25:28188216-28187817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 39
               

               
Conread position:
               
81-253
               

               
Cow position:
               
chr25:5572065-5571892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
81-291
               

               
Cow position:
               
chr25:7386478-7386698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
81-403
               

               
Cow position:
               
chr25:20020254-20019927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
137, 104
               

               
Conread position:
               
81-412
               

               
Cow position:
               
chr25:17702230-17701909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 98
               

               
Conread position:
               
81-514
               

               
Cow position:
               
chr25:14512849-14513299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 35
               

               
Conread position:
               
81-537
               

               
Cow position:
               
chr25:22203957-22203471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 227
               

               
Conread position:
               
82-294
               

               
Cow position:
               
chr25:24452434-24452226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
83-242
               

               
Cow position:
               
chr25:33691289-33691449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
135, 33
               

               
Conread position:
               
83-253
               

               
Cow position:
               
chr25:28920626-28920796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
83-261
               

               
Cow position:
               
chr25:36535697-36535525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
152, 34
               

               
Conread position:
               
83-518
               

               
Cow position:
               
chr25:26700775-26701217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 32
               

               
Conread position:
               
84-495
               

               
Cow position:
               
chr25:18075405-18075840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 48
               

               
Conread position:
               
85-261
               

               
Cow position:
               
chr25:26058322-26058500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
76, 88
               

               
Conread position:
               
85-506
               

               
Cow position:
               
chr25:17566324-17566776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
149, 102
               

               
Conread position:
               
85-521
               

               
Cow position:
               
chr25:38957715-38958145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 32
               

               
Conread position:
               
85-530
               

               
Cow position:
               
chr25:12778797-12778352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 293
               

               
Conread position:
               
86-316
               

               
Cow position:
               
chr25:9961440-9961199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
70, 223
               

               
Conread position:
               
87-178
               

               
Cow position:
               
chr25:21892845-21892935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
87-184
               

               
Cow position:
               
chr25:36139345-36139442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
87-220
               

               
Cow position:
               
chr25:2517285-2517413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
87-223
               

               
Cow position:
               
chr25:12174766-12174630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
87-233
               

               
Cow position:
               
chr25:25939641-25939495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
92, 110
               

               
Conread position:
               
87-249
               

               
Cow position:
               
chr25:13566584-13566748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
87-260
               

               
Cow position:
               
chr25:40407730-40407560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
127, 30
               

               
Conread position:
               
87-313
               

               
Cow position:
               
chr25:19679081-19679315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
87-425
               

               
Cow position:
               
chr25:14809049-14809371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
87-518
               

               
Cow position:
               
chr25:7011210-7010773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
132, 202
               

               
Conread position:
               
88-288
               

               
Cow position:
               
chr25:433336-433135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
143, 28
               

               
Conread position:
               
88-321
               

               
Cow position:
               
chr25:13099740-13099501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
88-452
               

               
Cow position:
               
chr25:31230483-31230120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
171, 48
               

               
Conread position:
               
88-531
               

               
Cow position:
               
chr25:18487414-18487887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
121, 43
               

               
Conread position:
               
89-321
               

               
Cow position:
               
chr25:19633876-19633650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
145, 28
               

               
Conread position:
               
89-328
               

               
Cow position:
               
chr25:8918537-8918293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 218
               

               
Conread position:
               
89-458
               

               
Cow position:
               
chr25:12117245-12116861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 41
               

               
Conread position:
               
89-518
               

               
Cow position:
               
chr25:7306039-7306487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
89-522
               

               
Cow position:
               
chr25:33550247-33550713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 36
               

               
Conread position:
               
90-323
               

               
Cow position:
               
chr25:16001779-16001547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
90-451
               

               
Cow position:
               
chr25:10949810-10949450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
141, 26
               

               
Conread position:
               
90-453
               

               
Cow position:
               
chr25:7581685-7581295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 26
               

               
Conread position:
               
90-514
               

               
Cow position:
               
chr25:9269115-9269533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 25
               

               
Conread position:
               
90-514
               

               
Cow position:
               
chr25:16400507-16400116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
171, 6
               

               
Conread position:
               
91-300
               

               
Cow position:
               
chr25:6814994-6815199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
127, 26
               

               
Conread position:
               
91-445
               

               
Cow position:
               
chr25:15254588-15254227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 99
               

               
Conread position:
               
94-265
               

               
Cow position:
               
chr25:36026753-36026924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
123, 99
               

               
Conread position:
               
94-323
               

               
Cow position:
               
chr25:8675593-8675831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
119, 224
               

               
Conread position:
               
94-387
               

               
Cow position:
               
chr25:2194693-2194991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
95-221
               

               
Cow position:
               
chr25:12997096-12997224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
95-261
               

               
Cow position:
               
chr25:22971221-22971387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
95-288
               

               
Cow position:
               
chr25:27940058-27939864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
118, 107
               

               
Conread position:
               
95-321
               

               
Cow position:
               
chr25:4002543-4002779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
121, 216
               

               
Conread position:
               
95-423
               

               
Cow position:
               
chr25:18265911-18266260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
112, 21
               

               
Conread position:
               
95-520
               

               
Cow position:
               
chr25:19129599-19130053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 39
               

               
Conread position:
               
96-521
               

               
Cow position:
               
chr25:24669682-24669252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 20
               

               
Conread position:
               
97-233
               

               
Cow position:
               
chr25:32176472-32176333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
98-277
               

               
Cow position:
               
chr25:20085037-20085214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
134, 92
               

               
Conread position:
               
98-295
               

               
Cow position:
               
chr25:20211336-20211129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 145
               

               
Conread position:
               
98-529
               

               
Cow position:
               
chr25:12294001-12293530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
82, 398
               

               
Conread position:
               
103-283
               

               
Cow position:
               
chr25:19576685-19576504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
103-403
               

               
Cow position:
               
chr25:24008422-24008121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
114, 82
               

               
Conread position:
               
104-246
               

               
Cow position:
               
chr25:17475768-17475622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
111, 132
               

               
Conread position:
               
104-261
               

               
Cow position:
               
chr25:18988132-18988293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
104-518
               

               
Cow position:
               
chr25:23324608-23324176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
117, 234
               

               
Conread position:
               
106-486
               

               
Cow position:
               
chr25:41132597-41132201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
132, 89
               

               
Conread position:
               
106-506
               

               
Cow position:
               
chr25:22369151-22369571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
118, 77
               

               
Conread position:
               
107-418
               

               
Cow position:
               
chr25:15377092-15377417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
114, 69
               

               
Conread position:
               
110-227
               

               
Cow position:
               
chr25:33572444-33572325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
110-278
               

               
Cow position:
               
chr25:7329306-7329476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
110-295
               

               
Cow position:
               
chr25:15286778-15286589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
106, 83
               

               
Conread position:
               
110-522
               

               
Cow position:
               
chr25:19478449-19478891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 137
               

               
Conread position:
               
110-530
               

               
Cow position:
               
chr25:1762869-1763292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
111-330
               

               
Cow position:
               
chr25:13380853-13380624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
107, 203
               

               
Conread position:
               
111-522
               

               
Cow position:
               
chr25:21289103-21289552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
107, 302
               

               
Conread position:
               
112-451
               

               
Cow position:
               
chr25:61421-61779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 73
               

               
Conread position:
               
113-253
               

               
Cow position:
               
chr25:16316662-16316797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
104, 65
               

               
Conread position:
               
113-260
               

               
Cow position:
               
chr25:26338210-26338361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
114-261
               

               
Cow position:
               
chr25:6256172-6256025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
104, 41
               

               
Conread position:
               
114-428
               

               
Cow position:
               
chr25:14467319-14466993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
115-445
               

               
Cow position:
               
chr25:35826509-35826160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
101, 47
               

               
Conread position:
               
116-532
               

               
Cow position:
               
chr25:29826178-29826630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
21, 274
               

               
Conread position:
               
118-253
               

               
Cow position:
               
chr25:8225867-8226004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
118-324
               

               
Cow position:
               
chr25:36033206-36033423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
118-440
               

               
Cow position:
               
chr25:6961380-6961037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
142, 45
               

               
Conread position:
               
118-449
               

               
Cow position:
               
chr25:10218281-10217924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
31, 63
               

               
Conread position:
               
120-234
               

               
Cow position:
               
chr25:35902011-35902126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
98, 48
               

               
Conread position:
               
120-453
               

               
Cow position:
               
chr25:34169726-34170075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 76
               

               
Conread position:
               
121-245
               

               
Cow position:
               
chr25:36557459-36557585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
125-522
               

               
Cow position:
               
chr25:7007693-7008121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
131-342
               

               
Cow position:
               
chr25:11978916-11978702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
131-452
               

               
Cow position:
               
chr25:12899538-12899857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
131-530
               

               
Cow position:
               
chr25:26090029-26089618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
144-294
               

               
Cow position:
               
chr25:26270138-26269988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
144-440
               

               
Cow position:
               
chr25:20133520-20133199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
5, 46
               

               
Conread position:
               
144-522
               

               
Cow position:
               
chr25:13294702-13295064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
144-532
               

               
Cow position:
               
chr25:17704545-17704946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 321
               

               
Conread position:
               
144-534
               

               
Cow position:
               
chr25:40905033-40904615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
145-295
               

               
Cow position:
               
chr25:13736514-13736361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
145-523
               

               
Cow position:
               
chr25:13272366-13272771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 115
               

               
Conread position:
               
145-529
               

               
Cow position:
               
chr25:22178718-22179116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 35
               

               
Conread position:
               
145-531
               

               
Cow position:
               
chr25:34768923-34768538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 28
               

               
Conread position:
               
146-348
               

               
Cow position:
               
chr25:22112763-22112968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
74, 138
               

               
Conread position:
               
146-502
               

               
Cow position:
               
chr25:2624603-2624975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 135
               

               
Conread position:
               
146-546
               

               
Cow position:
               
chr25:7750248-7750673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 192
               

               
Conread position:
               
155-261
               

               
Cow position:
               
chr25:35110323-35110214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
155-323
               

               
Cow position:
               
chr25:3982851-3983019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
155-506
               

               
Cow position:
               
chr25:32453591-32453245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 165
               

               
Conread position:
               
155-530
               

               
Cow position:
               
chr25:14720559-14720938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 40
               

               
Conread position:
               
159-451
               

               
Cow position:
               
chr25:18905692-18906012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
161-532
               

               
Cow position:
               
chr25:18894910-18894498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 131
               

               
Conread position:
               
162-529
               

               
Cow position:
               
chr25:37562521-37562909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 165
               

               
Conread position:
               
163-460
               

               
Cow position:
               
chr25:38569651-38569343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 51
               

               
Conread position:
               
165-512
               

               
Cow position:
               
chr25:17190927-17190562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
58, 128
               

               
Conread position:
               
170-304
               

               
Cow position:
               
chr25:23571079-23570943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 107
               

               
Conread position:
               
170-452
               

               
Cow position:
               
chr25:22751190-22750878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 32
               

               
Conread position:
               
171-265
               

               
Cow position:
               
chr25:6190655-6190752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
174-483
               

               
Cow position:
               
chr25:32277778-32277451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
8, 286
               

               
Conread position:
               
175-451
               

               
Cow position:
               
chr25:15440957-15440655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 156
               

               
Conread position:
               
175-544
               

               
Cow position:
               
chr25:11315733-11316126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
46, 108
               

               
Conread position:
               
178-511
               

               
Cow position:
               
chr25:23779493-23779143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
180-537
               

               
Cow position:
               
chr25:11051358-11051738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
20, 200
               

               
Conread position:
               
184-506
               

               
Cow position:
               
chr25:13443571-13443222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
80, 6
               

               
Conread position:
               
187-524
               

               
Cow position:
               
chr25:21893173-21893537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 279
               

               
Conread position:
               
188-437
               

               
Cow position:
               
chr25:30065044-30064800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
32, 90
               

               
Conread position:
               
188-523
               

               
Cow position:
               
chr25:41151124-41150762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
188-531
               

               
Cow position:
               
chr25:30462463-30462110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
30, 123
               

               
Conread position:
               
189-531
               

               
Cow position:
               
chr25:26679065-26679437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
195-501
               

               
Cow position:
               
chr25:9107651-9107353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 82
               

               
Conread position:
               
202-534
               

               
Cow position:
               
chr25:12609195-12609556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
20, 182
               

               
Conread position:
               
204-529
               

               
Cow position:
               
chr25:22730690-22731035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
207-531
               

               
Cow position:
               
chr25:20523373-20523027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 150
               

               
Conread position:
               
214-507
               

               
Cow position:
               
chr25:36835560-36835246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 222
               

               
Conread position:
               
215-526
               

               
Cow position:
               
chr25:9843041-9843386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
216-502
               

               
Cow position:
               
chr25:3373506-3373206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
59, 134
               

               
Conread position:
               
217-521
               

               
Cow position:
               
chr25:24203125-24202809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
217-537
               

               
Cow position:
               
chr25:18202059-18201710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 169
               

               
Conread position:
               
217-537
               

               
Cow position:
               
chr25:33686812-33686467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
219-537
               

               
Cow position:
               
chr25:12510140-12509805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
49, 230
               

               
Conread position:
               
221-526
               

               
Cow position:
               
chr25:4245561-4245870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 176
               

               
Conread position:
               
223-522
               

               
Cow position:
               
chr25:4488793-4489104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
52, 180
               

               
Conread position:
               
230-504
               

               
Cow position:
               
chr25:36872242-36872546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
237-544
               

               
Cow position:
               
chr25:7440919-7441232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 128
               

               
Conread position:
               
244-518
               

               
Cow position:
               
chr25:11780188-11780461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 127
               

               
Conread position:
               
258-452
               

               
Cow position:
               
chr25:36120416-36120626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
273-524
               

               
Cow position:
               
chr25:13826383-13826634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
167, 37
               

               
Conread position:
               
273-526
               

               
Cow position:
               
chr25:12195287-12195015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
274-518
               

               
Cow position:
               
chr25:37254826-37255056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 124
               

               
Conread position:
               
275-452
               

               
Cow position:
               
chr25:36045634-36045805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
147, 34
               

               
Conread position:
               
276-452
               

               
Cow position:
               
chr25:30625133-30624955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
150, 38
               

               
Conread position:
               
277-530
               

               
Cow position:
               
chr25:2041918-2041685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
284-509
               

               
Cow position:
               
chr25:7380883-7380650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 212
               

               
Conread position:
               
290-442
               

               
Cow position:
               
chr25:14157587-14157745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
290-549
               

               
Cow position:
               
chr25:19679318-19679577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
291-419
               

               
Cow position:
               
chr25:14211592-14211721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
291-508
               

               
Cow position:
               
chr25:26306240-26306016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
291-514
               

               
Cow position:
               
chr25:7799513-7799745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
291-533
               

               
Cow position:
               
chr25:11823465-11823235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
193, 23
               

               
Conread position:
               
291-538
               

               
Cow position:
               
chr25:9025091-9025340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
291-541
               

               
Cow position:
               
chr25:27595530-27595782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
135, 24
               

               
Conread position:
               
292-451
               

               
Cow position:
               
chr25:23745221-23745387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
292-452
               

               
Cow position:
               
chr25:40931242-40931401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 23
               

               
Conread position:
               
292-506
               

               
Cow position:
               
chr25:6258851-6259069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 15
               

               
Conread position:
               
292-518
               

               
Cow position:
               
chr25:36555724-36555502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
133, 173
               

               
Conread position:
               
292-544
               

               
Cow position:
               
chr25:36074030-36073778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
294-509
               

               
Cow position:
               
chr25:16372519-16372741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
294-514
               

               
Cow position:
               
chr25:11760486-11760267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 79
               

               
Conread position:
               
294-522
               

               
Cow position:
               
chr25:21668214-21668449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
12, 174
               

               
Conread position:
               
295-507
               

               
Cow position:
               
chr25:11276519-11276733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
295-522
               

               
Cow position:
               
chr25:1840293-1840522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 14
               

               
Conread position:
               
295-523
               

               
Cow position:
               
chr25:18810308-18810533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 136
               

               
Conread position:
               
295-526
               

               
Cow position:
               
chr25:18929222-18929001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
133, 15
               

               
Conread position:
               
295-531
               

               
Cow position:
               
chr25:17119713-17119955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
135, 7
               

               
Conread position:
               
295-531
               

               
Cow position:
               
chr25:22348493-22348248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
295-531
               

               
Cow position:
               
chr25:33457701-33457935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
131, 20
               

               
Conread position:
               
295-537
               

               
Cow position:
               
chr25:3346225-3345984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
296-512
               

               
Cow position:
               
chr25:36716887-36717103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
296-521
               

               
Cow position:
               
chr25:22298605-22298832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
11, 101
               

               
Conread position:
               
296-531
               

               
Cow position:
               
chr25:7673266-7673512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
45, 5
               

               
Conread position:
               
297-516
               

               
Cow position:
               
chr25:6928536-6928321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
133, 17
               

               
Conread position:
               
298-441
               

               
Cow position:
               
chr25:6134118-6133974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
132, 16
               

               
Conread position:
               
300-504
               

               
Cow position:
               
chr25:23245032-23244821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
300-515
               

               
Cow position:
               
chr25:31514155-31514378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
124, 31
               

               
Conread position:
               
306-515
               

               
Cow position:
               
chr25:10791834-10791625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
116, 8
               

               
Conread position:
               
307-522
               

               
Cow position:
               
chr25:5807925-5808150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
309-522
               

               
Cow position:
               
chr25:33557257-33557467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
119, 54
               

               
Conread position:
               
311-443
               

               
Cow position:
               
chr25:4947946-4948081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
311-452
               

               
Cow position:
               
chr25:15463571-15463715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
311-452
               

               
Cow position:
               
chr25:23505036-23505178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
311-506
               

               
Cow position:
               
chr25:36873349-36873152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
311-512
               

               
Cow position:
               
chr25:19364075-19363869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
311-514
               

               
Cow position:
               
chr25:9615821-9616031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
311-514
               

               
Cow position:
               
chr25:18288784-18288577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
115, 37
               

               
Conread position:
               
311-518
               

               
Cow position:
               
chr25:12305260-12305476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
311-518
               

               
Cow position:
               
chr25:23520044-23519840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
115, 53
               

               
Conread position:
               
311-522
               

               
Cow position:
               
chr25:40682722-40682938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
116, 35
               

               
Conread position:
               
311-523
               

               
Cow position:
               
chr25:3744761-3744532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
311-523
               

               
Cow position:
               
chr25:17918958-17919179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
119, 166
               

               
Conread position:
               
311-529
               

               
Cow position:
               
chr25:28668067-28667842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
311-529
               

               
Cow position:
               
chr25:37332052-37331838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
111, 33
               

               
Conread position:
               
311-530
               

               
Cow position:
               
chr25:6292551-6292775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 218
               

               
Conread position:
               
311-531
               

               
Cow position:
               
chr25:13767955-13768168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
116, 75
               

               
Conread position:
               
311-531
               

               
Cow position:
               
chr25:18760724-18760500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
113, 158
               

               
Conread position:
               
311-531
               

               
Cow position:
               
chr25:20085555-20085789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 109
               

               
Conread position:
               
311-533
               

               
Cow position:
               
chr25:13222884-13223110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 198
               

               
Conread position:
               
311-533
               

               
Cow position:
               
chr25:35762575-35762802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
311-537
               

               
Cow position:
               
chr25:13621372-13621146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
119, 52
               

               
Conread position:
               
311-549
               

               
Cow position:
               
chr25:28597628-28597376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
311-554
               

               
Cow position:
               
chr25:7551375-7551134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
311-561
               

               
Cow position:
               
chr25:35339206-35338950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
311-595
               

               
Cow position:
               
chr25:5637401-5637116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
117, 182
               

               
Conread position:
               
312-445
               

               
Cow position:
               
chr25:5920066-5920202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
312-501
               

               
Cow position:
               
chr25:16867223-16867425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
312-506
               

               
Cow position:
               
chr25:40321302-40321111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
312-517
               

               
Cow position:
               
chr25:7726647-7726861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
312-518
               

               
Cow position:
               
chr25:34978877-34978660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
121, 102
               

               
Conread position:
               
312-518
               

               
Cow position:
               
chr25:35109284-35109081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
312-522
               

               
Cow position:
               
chr25:33311342-33311120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
312-522
               

               
Cow position:
               
chr25:33555592-33555810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
118, 62
               

               
Conread position:
               
312-528
               

               
Cow position:
               
chr25:30816874-30817101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
312-531
               

               
Cow position:
               
chr25:10364349-10364144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
312-531
               

               
Cow position:
               
chr25:33101620-33101402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 14
               

               
Conread position:
               
312-537
               

               
Cow position:
               
chr25:433063-432830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
107, 185
               

               
Conread position:
               
312-539
               

               
Cow position:
               
chr25:26072572-26072349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
118, 38
               

               
Conread position:
               
312-549
               

               
Cow position:
               
chr25:6474102-6473847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
112, 246
               

               
Conread position:
               
313-507
               

               
Cow position:
               
chr25:11432959-11432766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
117, 144
               

               
Conread position:
               
313-515
               

               
Cow position:
               
chr25:17403469-17403670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
117, 53
               

               
Conread position:
               
313-519
               

               
Cow position:
               
chr25:13823733-13823521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
113, 94
               

               
Conread position:
               
313-522
               

               
Cow position:
               
chr25:26225043-26224835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
313-530
               

               
Cow position:
               
chr25:35052637-35052409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
314-452
               

               
Cow position:
               
chr25:15695253-15695391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
314-457
               

               
Cow position:
               
chr25:36021311-36021454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
112, 36
               

               
Conread position:
               
314-507
               

               
Cow position:
               
chr25:24862862-24863054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
314-518
               

               
Cow position:
               
chr25:9574143-9573938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
111, 49
               

               
Conread position:
               
314-518
               

               
Cow position:
               
chr25:36873069-36872858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
314-528
               

               
Cow position:
               
chr25:22315192-22315410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
112, 211
               

               
Conread position:
               
315-522
               

               
Cow position:
               
chr25:2361825-2362026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
113, 48
               

               
Conread position:
               
315-522
               

               
Cow position:
               
chr25:20202901-20203109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
316-522
               

               
Cow position:
               
chr25:7277336-7277122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 12
               

               
Conread position:
               
317-521
               

               
Cow position:
               
chr25:22733999-22734206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
116, 19
               

               
Conread position:
               
318-526
               

               
Cow position:
               
chr25:11841288-11841504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 56
               

               
Conread position:
               
319-532
               

               
Cow position:
               
chr25:14419693-14419908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
320-531
               

               
Cow position:
               
chr25:8347645-8347868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
320-534
               

               
Cow position:
               
chr25:23998931-23998727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
321-446
               

               
Cow position:
               
chr25:34967515-34967387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
322-522
               

               
Cow position:
               
chr25:30852762-30852966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
322-537
               

               
Cow position:
               
chr25:31657282-31657069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
328-514
               

               
Cow position:
               
chr25:33776059-33776253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
98, 5
               

               
Conread position:
               
329-519
               

               
Cow position:
               
chr25:36155821-36156010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 13
               

               
Conread position:
               
329-522
               

               
Cow position:
               
chr25:18551332-18551132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
95, 72
               

               
Conread position:
               
330-518
               

               
Cow position:
               
chr25:2662402-2662591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
330-529
               

               
Cow position:
               
chr25:36369822-36370031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 63
               

               
Conread position:
               
330-529
               

               
Cow position:
               
chr25:36375513-36375722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 63
               

               
Conread position:
               
330-537
               

               
Cow position:
               
chr25:15573391-15573594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
96, 162
               

               
Conread position:
               
331-514
               

               
Cow position:
               
chr25:11857983-11857793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
332-521
               

               
Cow position:
               
chr25:15349900-15349709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
332-531
               

               
Cow position:
               
chr25:22373485-22373275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
334-522
               

               
Cow position:
               
chr25:24115309-24115114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
334-529
               

               
Cow position:
               
chr25:11060139-11060343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
337-519
               

               
Cow position:
               
chr25:36341009-36340843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
338-523
               

               
Cow position:
               
chr25:12755469-12755289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
338-533
               

               
Cow position:
               
chr25:1802622-1802825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
339-523
               

               
Cow position:
               
chr25:11373890-11373706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
340-529
               

               
Cow position:
               
chr25:7311382-7311184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
341-534
               

               
Cow position:
               
chr25:9023765-9023956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
341-536
               

               
Cow position:
               
chr25:26269703-26269500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 189
               

               
Conread position:
               
342-524
               

               
Cow position:
               
chr25:32745353-32745538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
343-522
               

               
Cow position:
               
chr25:31926361-31926183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
84, 95
               

               
Conread position:
               
343-530
               

               
Cow position:
               
chr25:18934618-18934428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
83, 7
               

               
Conread position:
               
344-514
               

               
Cow position:
               
chr25:29903652-29903826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
344-518
               

               
Cow position:
               
chr25:28662127-28662304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
344-522
               

               
Cow position:
               
chr25:17724207-17724019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
344-533
               

               
Cow position:
               
chr25:5791700-5791496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
344-573
               

               
Cow position:
               
chr25:22565941-22565719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
84, 51
               

               
Conread position:
               
345-518
               

               
Cow position:
               
chr25:14164213-14164395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
345-529
               

               
Cow position:
               
chr25:20143519-20143342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
180, 5
               

               
Conread position:
               
345-531
               

               
Cow position:
               
chr25:19832020-19832210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
345-537
               

               
Cow position:
               
chr25:36020428-36020627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
346-461
               

               
Cow position:
               
chr25:22280981-22280863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
346-514
               

               
Cow position:
               
chr25:37965276-37965456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
346-518
               

               
Cow position:
               
chr25:24147927-24147759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
346-519
               

               
Cow position:
               
chr25:33100594-33100770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
346-558
               

               
Cow position:
               
chr25:3141522-3141737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
75, 68
               

               
Conread position:
               
348-522
               

               
Cow position:
               
chr25:36070672-36070848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
78, 102
               

               
Conread position:
               
348-531
               

               
Cow position:
               
chr25:7684877-7684688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
350-528
               

               
Cow position:
               
chr25:14210006-14210183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
351-514
               

               
Cow position:
               
chr25:4157222-4157054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
352-531
               

               
Cow position:
               
chr25:17707849-17708015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
352-532
               

               
Cow position:
               
chr25:20063299-20063473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
130, 68
               

               
Conread position:
               
353-513
               

               
Cow position:
               
chr25:10856688-10856524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 136
               

               
Conread position:
               
354-502
               

               
Cow position:
               
chr25:11855522-11855366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
354-522
               

               
Cow position:
               
chr25:15552937-15553100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
354-531
               

               
Cow position:
               
chr25:12223598-12223774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 84
               

               
Conread position:
               
355-484
               

               
Cow position:
               
chr25:6781890-6782023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
355-502
               

               
Cow position:
               
chr25:14949783-14949630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
355-522
               

               
Cow position:
               
chr25:5922679-5922513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 85
               

               
Conread position:
               
360-512
               

               
Cow position:
               
chr25:447870-447716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 145
               

               
Conread position:
               
360-531
               

               
Cow position:
               
chr25:8411001-8410822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
363-514
               

               
Cow position:
               
chr25:10303570-10303720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
363-521
               

               
Cow position:
               
chr25:1509930-1509763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
371-521
               

               
Cow position:
               
chr25:13565279-13565134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
371-531
               

               
Cow position:
               
chr25:21547201-21547364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
371-537
               

               
Cow position:
               
chr25:15999508-15999334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 157
               

               
Conread position:
               
371-537
               

               
Cow position:
               
chr25:28423189-28423364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
371-538
               

               
Cow position:
               
chr25:21082363-21082185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
372-519
               

               
Cow position:
               
chr25:34990226-34990079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
372-530
               

               
Cow position:
               
chr25:15447541-15447700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 133
               

               
Conread position:
               
372-570
               

               
Cow position:
               
chr25:7185231-7185025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 161
               

               
Conread position:
               
373-504
               

               
Cow position:
               
chr25:22571004-22571142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
373-526
               

               
Cow position:
               
chr25:17141148-17141309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
376-514
               

               
Cow position:
               
chr25:4504725-4504587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
376-529
               

               
Cow position:
               
chr25:30709299-30709137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
376-531
               

               
Cow position:
               
chr25:20788774-20788616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
376-532
               

               
Cow position:
               
chr25:18865869-18866020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 92
               

               
Conread position:
               
377-526
               

               
Cow position:
               
chr25:7450125-7450264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
378-522
               

               
Cow position:
               
chr25:26642858-26643013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
378-530
               

               
Cow position:
               
chr25:28940090-28939933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
383-517
               

               
Cow position:
               
chr25:13470658-13470515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
387-531
               

               
Cow position:
               
chr25:7864393-7864541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
397-537
               

               
Cow position:
               
chr25:14659050-14658911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
400-522
               

               
Cow position:
               
chr25:22439429-22439302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
400-531
               

               
Cow position:
               
chr25:22752967-22753105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
401-544
               

               
Cow position:
               
chr25:6940415-6940267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
416-537
               

               
Cow position:
               
chr25:3637937-3637817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
438-531
               

               
Cow position:
               
chr25:7012844-7012937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
438-531
               

               
Cow position:
               
chr25:14211982-14212075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.