• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8033E16.3
        

               
Conread position:
               
1-101
               

               
Cow position:
               
chr27:24055569-24055671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-102
               

               
Cow position:
               
chr27:19146556-19146655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-116
               

               
Cow position:
               
chr27:2569962-2570075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-118
               

               
Cow position:
               
chr27:21297199-21297084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-118
               

               
Cow position:
               
chr27:31397467-31397352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr27:1768985-1769101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-119
               

               
Cow position:
               
chr27:14125460-14125576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr27:9060034-9059906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
1-129
               

               
Cow position:
               
chr27:23148229-23148354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 64
               

               
Conread position:
               
1-133
               

               
Cow position:
               
chr27:26087528-26087398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-137
               

               
Cow position:
               
chr27:15408122-15408253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr27:17926022-17926176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr27:27292554-27292723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
119, 64
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr27:1906368-1906195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr27:20636148-20635977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
133, 81
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr27:23502760-23502583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr27:15342833-15343007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr27:26313902-26314079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr27:22107962-22108151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
175, 86
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr27:23595569-23595383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr27:7487861-7488054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr27:23894206-23894397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr27:17462852-17463043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr27:24295389-24295197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
119, 84
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr27:834245-834439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr27:28293469-28293279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr27:16241636-16241445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr27:16260667-16260862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
120, 11
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr27:197595-197398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr27:18218843-18218646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
118, 79
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr27:19014891-19015089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
150, 77
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr27:21564955-21564760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
47, 88
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr27:30198574-30198376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr27:23511418-23511216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr27:29341245-29341456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
75, 192
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr27:13273711-13273913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr27:26785683-26785883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr27:3239713-3239927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
206, 86
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr27:15349503-15349719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
41, 89
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr27:427418-427210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr27:28895579-28895793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
109, 70
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr27:19626986-19627200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 47
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr27:28146350-28146568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
99, 70
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr27:26015712-26015484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
219, 77
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr27:13257868-13258095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
203, 13
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr27:28106838-28107062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
217, 62
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr27:264545-264320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
216, 68
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr27:1173244-1173477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 86
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr27:2429936-2430168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr27:10986790-10987013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
216, 75
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr27:18205630-18205406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
217, 42
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr27:20634750-20634525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr27:20866231-20866455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr27:26935074-26935302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
109, 79
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr27:27630442-27630674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr27:28276568-28276341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
215, 35
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr27:9436663-9436901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr27:16823109-16822882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
217, 37
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr27:25970808-25970576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
10, 76
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:724416-724653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:1030682-1030448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
126, 68
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:1521551-1521788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:1654971-1655208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:2590020-2589783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:5881400-5881636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:8743231-8742994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:10579810-10580047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
121, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:11651378-11651141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:12007020-12007257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:12501986-12502223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:13878071-13878321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
109, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:13895565-13895803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:13901995-13902231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 78
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:17476342-17476118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
204, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:18811986-18811749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:19325799-19325562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:19487112-19486875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:23079958-23080195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:24241247-24241010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:26341322-26341559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:26463587-26463824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:26584603-26584366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:27809767-27810004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:29446235-29445998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:29797108-29797345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:30014776-30015013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:30271450-30271213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
131, 79
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:30361505-30361268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:30684207-30683970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr27:31566285-31566522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr27:523893-524131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr27:1481765-1482003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr27:31365828-31365587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr27:18693715-18693972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr27:12282554-12282809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 196
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr27:30783793-30784039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
194, 56
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr27:191004-190763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
216, 37
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr27:7289810-7290053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 86
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr27:22255186-22254936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 76
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr27:16182363-16182129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
231, 78
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr27:17763720-17763475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 77
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr27:26598174-26597923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
200, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:5861504-5861248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
109, 87
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:9335062-9335312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
129, 74
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:12097894-12097641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
129, 86
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:12751392-12751638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
212, 8
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:14298061-14298313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:14530545-14530798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
121, 85
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:15100511-15100764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
195, 86
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:15312497-15312252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:16030526-16030275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
203, 79
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:19299694-19299441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:19931452-19931202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
201, 77
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:23124057-23124306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
218, 69
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:27521705-27521958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 85
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr27:28082018-28082277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 70
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr27:32664-32920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr27:221758-222014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr27:3231425-3231170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 69
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr27:5882214-5882469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 65
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr27:10590376-10590632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr27:12147764-12148020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr27:17403195-17402939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr27:29812173-29812423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
231, 80
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr27:20066063-20066310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
217, 81
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr27:27449138-27449382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 68
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr27:6899416-6899673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
216, 78
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr27:13182430-13182183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
155, 79
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr27:16620287-16620032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 68
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr27:30417973-30417723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
200, 76
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr27:4719596-4719850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 89
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr27:4824817-4825070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
90, 118
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr27:15867686-15867439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
230, 79
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr27:24559152-24559401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
219, 60
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr27:27040896-27040648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
117, 47
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr27:26545624-26545880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
218, 79
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr27:24999437-24999701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 86
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr27:30921450-30921188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
233, 63
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr27:8291711-8291978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
104, 78
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr27:732862-732594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 68
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr27:23576240-23576514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
113, 86
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr27:26142093-26141796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
161, 79
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr27:1675669-1675394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
200, 79
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr27:25791111-25790814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
75, 192
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr27:8973317-8973609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
121, 76
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr27:9989006-9988718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
212, 79
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr27:11481802-11482086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
212, 13
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr27:1189514-1189810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
231, 79
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr27:2298711-2298412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 86
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr27:26796275-26795989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
231, 87
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr27:29208095-29207818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
230, 65
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr27:31371994-31372281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
217, 78
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr27:491186-490900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
68, 73
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr27:22394468-22394166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
217, 67
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr27:27141891-27141603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 79
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr27:30677198-30676912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
217, 87
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr27:3340087-3339787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 80
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr27:4769187-4769487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
121, 82
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr27:9045960-9045663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
109, 79
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr27:25924082-25923785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
228, 86
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr27:27728621-27728310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr27:4829516-4829815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 10
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr27:2557111-2556791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 79
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr27:20749742-20750058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
198, 86
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr27:26787065-26787381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr27:13860446-13860748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
217, 68
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr27:30856103-30856401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
217, 50
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr27:11255812-11255501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 86
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr27:4664771-4664458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 186
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr27:16238195-16237891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
217, 79
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr27:18446282-18446604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 79
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr27:23454851-23455171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
176, 79
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr27:11606014-11605695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 79
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr27:8959145-8958809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr27:18544297-18543973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 86
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr27:28982606-28982939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr27:3650354-3650681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
206, 86
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr27:8187694-8188021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr27:11417593-11417920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr27:12016639-12016314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 84
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr27:13422292-13421965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr27:15178512-15178177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
134, 79
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr27:18621099-18620780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
206, 79
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr27:19522837-19522508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
213, 81
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr27:20858990-20859310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr27:22796787-22796461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr27:29035510-29035183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr27:29374034-29373709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr27:2390594-2390259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 80
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr27:4881907-4881571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 86
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr27:4983302-4983638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 86
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr27:5836701-5837035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 51
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr27:12549408-12549068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 83
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr27:14129802-14129469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 87
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr27:15644158-15644494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 84
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr27:16305481-16305806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
223, 81
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr27:19423503-19423166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
213, 82
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr27:20137698-20138037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
121, 79
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr27:20811288-20811619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr27:22655078-22655414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 86
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr27:26330769-26331109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr27:28984642-28984974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
123, 79
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr27:66929-67268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr27:526781-527120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr27:16045602-16045936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
206, 86
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr27:2627773-2628112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
215, 79
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr27:11403207-11402871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
123, 79
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr27:2001716-2002075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr27:11413014-11412651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 21
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr27:26856912-26857294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 79
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr27:9090502-9090902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 78
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr27:25380296-25379873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 92
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr27:815664-815245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 88
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr27:15272205-15271793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 86
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr27:20372529-20372948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
104, 17
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr27:28907365-28906935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
217, 37
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr27:29515562-29515976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
273, 81
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr27:3988908-3988473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 44
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr27:4805610-4806039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 49
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr27:1123316-1122887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 22
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr27:536752-536305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 53
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr27:15319750-15319302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
169, 55
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr27:27038541-27038999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 111
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr27:12277979-12278406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
230, 70
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr27:23472547-23472094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 21
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr27:20549384-20549875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 220
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr27:27064145-27064606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 60
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr27:12246944-12246487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr27:8942393-8942860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
259, 46
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr27:27136236-27136692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 10
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr27:6074215-6073758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 84
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr27:30792631-30793099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
78, 53
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr27:6674534-6674107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 39
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr27:20757759-20758197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 76
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr27:27683816-27684286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr27:4673314-4672834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 47
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr27:20641044-20641510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 163
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr27:26300134-26299660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
207, 81
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr27:4385766-4386242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 83
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr27:26959325-26959807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr27:1768340-1768833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 5
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr27:17645899-17646373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 78
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr27:26424290-26424807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 79
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr27:21393208-21393725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 45
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr27:13411062-13411605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
187, 21
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr27:10992666-10992136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 35
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr27:22549488-22550013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 18
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr27:22603461-22602931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
220, 65
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr27:23128753-23128222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 70
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr27:23452773-23452220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 46
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr27:30868441-30868994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 86
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr27:20283922-20283398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 37
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr27:22171597-22171056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 30
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr27:8961970-8962488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 86
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr27:15871461-15870910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
135, 79
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr27:27460291-27460825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 42
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr27:14670082-14670628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 79
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr27:16513583-16514097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 86
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr27:22330361-22330906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
51, 175
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr27:26427829-26428377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 88
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr27:26999126-26999671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 51
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr27:16787131-16786581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 426
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chr27:1903362-1902818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chr27:15927071-15926543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 86
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chr27:22440441-22439887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 86
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr27:7958536-7959082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 86
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr27:26984638-26984102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 70
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr27:299084-299628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 78
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr27:1636648-1637179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 35
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr27:20869388-20869934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 247
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chr27:25809224-25809770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 86
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr27:13876026-13875476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 9
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr27:31219534-31219019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 16
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr27:10306977-10307558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 230
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr27:22035078-22035628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 38
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr27:22426530-22427094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
31, 87
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr27:24445857-24446394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 85
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr27:24477699-24477171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 86
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr27:26223970-26224511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 84
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr27:27019804-27020353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 68
               

               
Conread position:
               
1-532
               

               
Cow position:
               
chr27:15454512-15453955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 84
               

               
Conread position:
               
1-532
               

               
Cow position:
               
chr27:22179488-22180023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 27
               

               
Conread position:
               
1-532
               

               
Cow position:
               
chr27:31230796-31231335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 68
               

               
Conread position:
               
1-533
               

               
Cow position:
               
chr27:24227494-24228062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 86
               

               
Conread position:
               
1-535
               

               
Cow position:
               
chr27:27856640-27856078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 123
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr27:11435032-11435586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr27:15315788-15315266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 84
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr27:20828408-20828964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 84
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr27:29799241-29798691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 44
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr27:30583036-30582475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 75
               

               
Conread position:
               
1-538
               

               
Cow position:
               
chr27:20629327-20628795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 101
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr27:20636777-20637321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 120
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr27:10582662-10582103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 88
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr27:15866520-15865958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 77
               

               
Conread position:
               
1-546
               

               
Cow position:
               
chr27:17397156-17397722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 78
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr27:21977838-21978439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 88
               

               
Conread position:
               
1-602
               

               
Cow position:
               
chr27:26433515-26434148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
2-120
               

               
Cow position:
               
chr27:15643782-15643898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
2-147
               

               
Cow position:
               
chr27:29815903-29815762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
2-167
               

               
Cow position:
               
chr27:27896949-27897112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr27:21283372-21283197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
2-200
               

               
Cow position:
               
chr27:27578871-27578675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
125, 85
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr27:4330879-4330676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr27:12240018-12240228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
121, 78
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr27:15632695-15632483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr27:3730016-3730231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
213, 68
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr27:20092324-20092531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr27:13977092-13977313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
94, 109
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr27:24167673-24167894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
109, 75
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr27:15761830-15761605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
154, 74
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr27:24938025-24938243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
214, 37
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr27:11634273-11634047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
206, 77
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr27:10284011-10284253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 122
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr27:7418580-7418818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr27:651659-651895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
119, 85
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr27:12005808-12005572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 85
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr27:2900943-2901234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 77
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr27:26595726-26595451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
149, 88
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr27:29309320-29309033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
187, 67
               

               
Conread position:
               
2-294
               

               
Cow position:
               
chr27:13198203-13197923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
216, 13
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr27:16785059-16784756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr27:4819413-4819720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr27:5990179-5989860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
164, 20
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr27:27502037-27502359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
85, 173
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr27:21349450-21349770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
230, 78
               

               
Conread position:
               
2-330
               

               
Cow position:
               
chr27:10384304-10384640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 85
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr27:29977553-29977124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
137, 63
               

               
Conread position:
               
2-414
               

               
Cow position:
               
chr27:5915377-5915809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
200, 85
               

               
Conread position:
               
2-445
               

               
Cow position:
               
chr27:25411217-25411675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 199
               

               
Conread position:
               
2-521
               

               
Cow position:
               
chr27:8062064-8062599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 67
               

               
Conread position:
               
2-522
               

               
Cow position:
               
chr27:8353762-8353248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 74
               

               
Conread position:
               
2-522
               

               
Cow position:
               
chr27:8430129-8430667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
77, 128
               

               
Conread position:
               
2-523
               

               
Cow position:
               
chr27:28018632-28018075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 67
               

               
Conread position:
               
2-531
               

               
Cow position:
               
chr27:19388315-19387765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 85
               

               
Conread position:
               
2-543
               

               
Cow position:
               
chr27:1353893-1353312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 125
               

               
Conread position:
               
2-543
               

               
Cow position:
               
chr27:15925633-15925076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
2-642
               

               
Cow position:
               
chr27:16984085-16983449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr27:12191152-12191333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr27:164977-164748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
195, 77
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr27:30306403-30306168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
124, 84
               

               
Conread position:
               
3-253
               

               
Cow position:
               
chr27:13442541-13442800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
76, 136
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr27:29831391-29831645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 86
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr27:9337810-9337561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 62
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr27:435539-435270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
98, 39
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr27:13317668-13317927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 76
               

               
Conread position:
               
3-278
               

               
Cow position:
               
chr27:9978123-9977855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 67
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr27:15858794-15859092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 81
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr27:3690770-3690445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
204, 84
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr27:2900106-2899781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
229, 46
               

               
Conread position:
               
3-425
               

               
Cow position:
               
chr27:27867388-27867804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
69, 112
               

               
Conread position:
               
3-452
               

               
Cow position:
               
chr27:7212425-7212883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 75
               

               
Conread position:
               
3-521
               

               
Cow position:
               
chr27:8629577-8630120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 89
               

               
Conread position:
               
3-522
               

               
Cow position:
               
chr27:28207095-28206557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 84
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr27:16331629-16331450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
4-256
               

               
Cow position:
               
chr27:18909548-18909300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
82, 125
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr27:21350719-21350976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 83
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr27:30388920-30389176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
111, 83
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr27:23070067-23070356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
259, 71
               

               
Conread position:
               
4-330
               

               
Cow position:
               
chr27:15033017-15032687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 65
               

               
Conread position:
               
4-408
               

               
Cow position:
               
chr27:11535802-11536232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 63
               

               
Conread position:
               
4-444
               

               
Cow position:
               
chr27:19718212-19717749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 72
               

               
Conread position:
               
4-474
               

               
Cow position:
               
chr27:22418471-22418963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 75
               

               
Conread position:
               
4-516
               

               
Cow position:
               
chr27:30374258-30374823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 188
               

               
Conread position:
               
4-541
               

               
Cow position:
               
chr27:17473118-17472547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
4-546
               

               
Cow position:
               
chr27:23632892-23632336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 18
               

               
Conread position:
               
5-158
               

               
Cow position:
               
chr27:9262397-9262251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
5-176
               

               
Cow position:
               
chr27:26833468-26833307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
5-186
               

               
Cow position:
               
chr27:6292665-6292487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr27:23793792-23793582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr27:11090897-11091133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 148
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr27:8589208-8589440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
196, 70
               

               
Conread position:
               
5-245
               

               
Cow position:
               
chr27:16099722-16099967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
5-274
               

               
Cow position:
               
chr27:8195511-8195248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
227, 66
               

               
Conread position:
               
5-282
               

               
Cow position:
               
chr27:18922745-18922475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 82
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr27:26161800-26161506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
48, 107
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr27:30561211-30560917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
81, 107
               

               
Conread position:
               
5-314
               

               
Cow position:
               
chr27:11723609-11723927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 74
               

               
Conread position:
               
5-435
               

               
Cow position:
               
chr27:6454508-6454054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 77
               

               
Conread position:
               
5-522
               

               
Cow position:
               
chr27:27606049-27606541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 82
               

               
Conread position:
               
5-530
               

               
Cow position:
               
chr27:26617656-26617160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 65
               

               
Conread position:
               
6-253
               

               
Cow position:
               
chr27:16960489-16960248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
207, 13
               

               
Conread position:
               
6-294
               

               
Cow position:
               
chr27:12231614-12231907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 43
               

               
Conread position:
               
7-313
               

               
Cow position:
               
chr27:26653598-26653291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
7-323
               

               
Cow position:
               
chr27:21408257-21408587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
7-327
               

               
Cow position:
               
chr27:5853624-5853955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
7-440
               

               
Cow position:
               
chr27:26412965-26413416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 62
               

               
Conread position:
               
7-466
               

               
Cow position:
               
chr27:30177275-30177733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 225
               

               
Conread position:
               
8-211
               

               
Cow position:
               
chr27:1785431-1785232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
9-237
               

               
Cow position:
               
chr27:1522884-1523112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
9-294
               

               
Cow position:
               
chr27:26919622-26919900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
266, 71
               

               
Conread position:
               
10-253
               

               
Cow position:
               
chr27:30508474-30508710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
195, 77
               

               
Conread position:
               
10-285
               

               
Cow position:
               
chr27:27737643-27737907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
208, 67
               

               
Conread position:
               
10-305
               

               
Cow position:
               
chr27:19962767-19962466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
66, 103
               

               
Conread position:
               
10-402
               

               
Cow position:
               
chr27:23731240-23731612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 93
               

               
Conread position:
               
12-441
               

               
Cow position:
               
chr27:21139111-21138670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 14
               

               
Conread position:
               
12-441
               

               
Cow position:
               
chr27:23882077-23882530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 142
               

               
Conread position:
               
12-450
               

               
Cow position:
               
chr27:26581158-26581604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
98, 66
               

               
Conread position:
               
12-529
               

               
Cow position:
               
chr27:6541906-6541384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
13-221
               

               
Cow position:
               
chr27:7591401-7591597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
13-322
               

               
Cow position:
               
chr27:2332381-2332696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
205, 53
               

               
Conread position:
               
13-531
               

               
Cow position:
               
chr27:28931502-28932058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
14-260
               

               
Cow position:
               
chr27:12502844-12503090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
106, 66
               

               
Conread position:
               
14-272
               

               
Cow position:
               
chr27:2643653-2643894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
216, 10
               

               
Conread position:
               
17-256
               

               
Cow position:
               
chr27:24548516-24548749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
17-522
               

               
Cow position:
               
chr27:28189934-28190438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 72
               

               
Conread position:
               
19-260
               

               
Cow position:
               
chr27:7971851-7971613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
228, 65
               

               
Conread position:
               
19-290
               

               
Cow position:
               
chr27:13843485-13843220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
213, 67
               

               
Conread position:
               
19-393
               

               
Cow position:
               
chr27:30362524-30362142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 68
               

               
Conread position:
               
19-452
               

               
Cow position:
               
chr27:22723432-22723864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 33
               

               
Conread position:
               
19-517
               

               
Cow position:
               
chr27:18558660-18558116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 48
               

               
Conread position:
               
20-200
               

               
Cow position:
               
chr27:21970516-21970689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
20-335
               

               
Cow position:
               
chr27:13354150-13354471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
20-509
               

               
Cow position:
               
chr27:19589755-19589249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 69
               

               
Conread position:
               
21-157
               

               
Cow position:
               
chr27:10085581-10085716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
103, 57
               

               
Conread position:
               
21-292
               

               
Cow position:
               
chr27:14633117-14632848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
104, 59
               

               
Conread position:
               
22-230
               

               
Cow position:
               
chr27:8011831-8012038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
98, 58
               

               
Conread position:
               
22-312
               

               
Cow position:
               
chr27:13409890-13410185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 57
               

               
Conread position:
               
22-313
               

               
Cow position:
               
chr27:30551283-30550983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
23-200
               

               
Cow position:
               
chr27:18155303-18155128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
24-227
               

               
Cow position:
               
chr27:18528012-18527810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 56
               

               
Conread position:
               
24-233
               

               
Cow position:
               
chr27:30845170-30844970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
111, 64
               

               
Conread position:
               
24-237
               

               
Cow position:
               
chr27:8932540-8932326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
103, 63
               

               
Conread position:
               
24-294
               

               
Cow position:
               
chr27:16580894-16580624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
209, 15
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr27:773428-773215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
102, 62
               

               
Conread position:
               
25-261
               

               
Cow position:
               
chr27:29400092-29399858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
25-426
               

               
Cow position:
               
chr27:26151312-26150873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
53, 175
               

               
Conread position:
               
27-262
               

               
Cow position:
               
chr27:5574275-5574040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
64, 156
               

               
Conread position:
               
28-237
               

               
Cow position:
               
chr27:19552156-19552366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
28-346
               

               
Cow position:
               
chr27:26952809-26952483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
28-396
               

               
Cow position:
               
chr27:12429684-12429292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 90
               

               
Conread position:
               
28-534
               

               
Cow position:
               
chr27:21668853-21669372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 59
               

               
Conread position:
               
29-292
               

               
Cow position:
               
chr27:30744549-30744820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
30-233
               

               
Cow position:
               
chr27:943381-943589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
129, 48
               

               
Conread position:
               
30-348
               

               
Cow position:
               
chr27:11273839-11273526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
7, 41
               

               
Conread position:
               
30-534
               

               
Cow position:
               
chr27:26508891-26509416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 57
               

               
Conread position:
               
31-223
               

               
Cow position:
               
chr27:27455188-27455376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
31-315
               

               
Cow position:
               
chr27:11422559-11422845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 56
               

               
Conread position:
               
31-330
               

               
Cow position:
               
chr27:14907000-14906695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
182, 47
               

               
Conread position:
               
31-519
               

               
Cow position:
               
chr27:31372711-31373216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 54
               

               
Conread position:
               
31-532
               

               
Cow position:
               
chr27:30406762-30407302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 58
               

               
Conread position:
               
32-347
               

               
Cow position:
               
chr27:11489010-11489330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
189, 48
               

               
Conread position:
               
32-547
               

               
Cow position:
               
chr27:20067719-20068247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 49
               

               
Conread position:
               
33-255
               

               
Cow position:
               
chr27:6909773-6909555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
199, 47
               

               
Conread position:
               
34-237
               

               
Cow position:
               
chr27:27699759-27699963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 53
               

               
Conread position:
               
34-322
               

               
Cow position:
               
chr27:29198279-29198572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
87, 53
               

               
Conread position:
               
34-537
               

               
Cow position:
               
chr27:6550717-6550198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 53
               

               
Conread position:
               
37-389
               

               
Cow position:
               
chr27:7851641-7851282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 85
               

               
Conread position:
               
38-431
               

               
Cow position:
               
chr27:24014479-24014889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
38-518
               

               
Cow position:
               
chr27:7412645-7412150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 49
               

               
Conread position:
               
39-259
               

               
Cow position:
               
chr27:668001-668222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
82, 48
               

               
Conread position:
               
39-445
               

               
Cow position:
               
chr27:23483486-23483062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 139
               

               
Conread position:
               
40-231
               

               
Cow position:
               
chr27:4928257-4928447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
40-522
               

               
Cow position:
               
chr27:2957664-2957170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 36
               

               
Conread position:
               
41-260
               

               
Cow position:
               
chr27:27843734-27843951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 9
               

               
Conread position:
               
42-531
               

               
Cow position:
               
chr27:28921641-28922152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 27
               

               
Conread position:
               
43-253
               

               
Cow position:
               
chr27:1672015-1672220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 35
               

               
Conread position:
               
43-387
               

               
Cow position:
               
chr27:16263590-16263251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
43-423
               

               
Cow position:
               
chr27:1058417-1058817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
43-537
               

               
Cow position:
               
chr27:18507889-18507385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 46
               

               
Conread position:
               
44-205
               

               
Cow position:
               
chr27:8925689-8925530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 35
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr27:22293456-22293636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
173, 35
               

               
Conread position:
               
44-514
               

               
Cow position:
               
chr27:15203975-15204475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 43
               

               
Conread position:
               
45-200
               

               
Cow position:
               
chr27:24689861-24689708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
45-292
               

               
Cow position:
               
chr27:27622758-27623013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
48-255
               

               
Cow position:
               
chr27:12263839-12263637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
184, 39
               

               
Conread position:
               
48-323
               

               
Cow position:
               
chr27:31147421-31147693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 39
               

               
Conread position:
               
49-261
               

               
Cow position:
               
chr27:26436623-26436838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
152, 38
               

               
Conread position:
               
49-398
               

               
Cow position:
               
chr27:2930345-2930705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 37
               

               
Conread position:
               
49-516
               

               
Cow position:
               
chr27:24331980-24331473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 41
               

               
Conread position:
               
49-518
               

               
Cow position:
               
chr27:23930215-23929735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 38
               

               
Conread position:
               
49-543
               

               
Cow position:
               
chr27:12516448-12515924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 27
               

               
Conread position:
               
50-237
               

               
Cow position:
               
chr27:160740-160552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
50-253
               

               
Cow position:
               
chr27:7425888-7426093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
5, 38
               

               
Conread position:
               
50-256
               

               
Cow position:
               
chr27:3638574-3638781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
50-452
               

               
Cow position:
               
chr27:1290618-1291022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
171, 37
               

               
Conread position:
               
51-237
               

               
Cow position:
               
chr27:11094905-11094718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
51-266
               

               
Cow position:
               
chr27:26398010-26398220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
53-322
               

               
Cow position:
               
chr27:26492453-26492724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
172, 34
               

               
Conread position:
               
53-521
               

               
Cow position:
               
chr27:27388781-27389273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 36
               

               
Conread position:
               
55-223
               

               
Cow position:
               
chr27:29693945-29693787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
55-237
               

               
Cow position:
               
chr27:13837561-13837378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
152, 32
               

               
Conread position:
               
55-391
               

               
Cow position:
               
chr27:11081441-11081091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
163, 24
               

               
Conread position:
               
55-533
               

               
Cow position:
               
chr27:28518530-28518040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 24
               

               
Conread position:
               
56-246
               

               
Cow position:
               
chr27:22608892-22609085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
160, 26
               

               
Conread position:
               
57-522
               

               
Cow position:
               
chr27:30890529-30890054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 22
               

               
Conread position:
               
58-518
               

               
Cow position:
               
chr27:10980106-10979617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 29
               

               
Conread position:
               
58-531
               

               
Cow position:
               
chr27:16284715-16284234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 31
               

               
Conread position:
               
58-531
               

               
Cow position:
               
chr27:22220796-22220293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 31
               

               
Conread position:
               
60-447
               

               
Cow position:
               
chr27:24738556-24738965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
29, 111
               

               
Conread position:
               
61-237
               

               
Cow position:
               
chr27:29140690-29140513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
66, 26
               

               
Conread position:
               
61-261
               

               
Cow position:
               
chr27:14902410-14902609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 26
               

               
Conread position:
               
63-220
               

               
Cow position:
               
chr27:27607031-27607182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
63-253
               

               
Cow position:
               
chr27:30884342-30884151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
130, 62
               

               
Conread position:
               
63-388
               

               
Cow position:
               
chr27:26935681-26936003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
63-507
               

               
Cow position:
               
chr27:11815522-11815979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 24
               

               
Conread position:
               
63-526
               

               
Cow position:
               
chr27:6500302-6499807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 24
               

               
Conread position:
               
63-531
               

               
Cow position:
               
chr27:26440821-26441285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 24
               

               
Conread position:
               
64-533
               

               
Cow position:
               
chr27:29493678-29494156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
65-330
               

               
Cow position:
               
chr27:10081427-10081704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
18, 5
               

               
Conread position:
               
65-447
               

               
Cow position:
               
chr27:25783837-25783457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
66-294
               

               
Cow position:
               
chr27:13006068-13005843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
152, 42
               

               
Conread position:
               
66-521
               

               
Cow position:
               
chr27:26643907-26643457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 21
               

               
Conread position:
               
68-531
               

               
Cow position:
               
chr27:7934929-7935412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
192, 141
               

               
Conread position:
               
70-509
               

               
Cow position:
               
chr27:26864889-26865342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 17
               

               
Conread position:
               
71-236
               

               
Cow position:
               
chr27:29893011-29892846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
154, 17
               

               
Conread position:
               
71-273
               

               
Cow position:
               
chr27:20544183-20543972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 175
               

               
Conread position:
               
71-305
               

               
Cow position:
               
chr27:27640760-27641010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
5, 46
               

               
Conread position:
               
73-506
               

               
Cow position:
               
chr27:23554096-23554560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 14
               

               
Conread position:
               
75-233
               

               
Cow position:
               
chr27:30185518-30185360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
143, 12
               

               
Conread position:
               
75-261
               

               
Cow position:
               
chr27:2011874-2012060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
8, 64
               

               
Conread position:
               
76-175
               

               
Cow position:
               
chr27:5932410-5932509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-247
               

               
Cow position:
               
chr27:26319263-26319090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
76-253
               

               
Cow position:
               
chr27:2110680-2110504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 80
               

               
Conread position:
               
76-261
               

               
Cow position:
               
chr27:6058728-6058540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
141, 40
               

               
Conread position:
               
76-261
               

               
Cow position:
               
chr27:21418840-21419026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
139, 98
               

               
Conread position:
               
76-261
               

               
Cow position:
               
chr27:22498779-22498600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
76-261
               

               
Cow position:
               
chr27:27259834-27259651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
142, 40
               

               
Conread position:
               
76-287
               

               
Cow position:
               
chr27:2848121-2847910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
39, 87
               

               
Conread position:
               
76-295
               

               
Cow position:
               
chr27:15200923-15200703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
144, 48
               

               
Conread position:
               
76-309
               

               
Cow position:
               
chr27:11762513-11762746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
142, 161
               

               
Conread position:
               
76-312
               

               
Cow position:
               
chr27:26379951-26380190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
76-314
               

               
Cow position:
               
chr27:30476227-30475984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
76-423
               

               
Cow position:
               
chr27:29019520-29019875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 288
               

               
Conread position:
               
76-439
               

               
Cow position:
               
chr27:4812651-4813041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 40
               

               
Conread position:
               
76-457
               

               
Cow position:
               
chr27:4835380-4835784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
76-515
               

               
Cow position:
               
chr27:27632383-27632833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 126
               

               
Conread position:
               
76-519
               

               
Cow position:
               
chr27:16478123-16478566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
141, 18
               

               
Conread position:
               
76-526
               

               
Cow position:
               
chr27:23917831-23918285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
76-529
               

               
Cow position:
               
chr27:30765258-30764780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
142, 111
               

               
Conread position:
               
76-530
               

               
Cow position:
               
chr27:13638766-13639246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 109
               

               
Conread position:
               
76-534
               

               
Cow position:
               
chr27:4390028-4390519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 126
               

               
Conread position:
               
77-233
               

               
Cow position:
               
chr27:19543684-19543834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
141, 108
               

               
Conread position:
               
77-253
               

               
Cow position:
               
chr27:31216938-31217117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
77-294
               

               
Cow position:
               
chr27:795007-794792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
141, 38
               

               
Conread position:
               
77-294
               

               
Cow position:
               
chr27:8048514-8048739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
141, 65
               

               
Conread position:
               
77-295
               

               
Cow position:
               
chr27:25676460-25676228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
14, 119
               

               
Conread position:
               
77-295
               

               
Cow position:
               
chr27:30527391-30527181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
185, 39
               

               
Conread position:
               
77-312
               

               
Cow position:
               
chr27:19577899-19577656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
77-359
               

               
Cow position:
               
chr27:6523271-6522975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
107, 130
               

               
Conread position:
               
77-514
               

               
Cow position:
               
chr27:12596980-12596543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 9
               

               
Conread position:
               
77-530
               

               
Cow position:
               
chr27:2592766-2592284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 39
               

               
Conread position:
               
78-236
               

               
Cow position:
               
chr27:6620370-6620214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
78-530
               

               
Cow position:
               
chr27:28001597-28002058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
78-547
               

               
Cow position:
               
chr27:20765739-20766206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
182, 117
               

               
Conread position:
               
79-234
               

               
Cow position:
               
chr27:3554527-3554372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
80-252
               

               
Cow position:
               
chr27:28038115-28038289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
80-253
               

               
Cow position:
               
chr27:18967534-18967710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
136, 35
               

               
Conread position:
               
81-194
               

               
Cow position:
               
chr27:23083776-23083664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
82, 105
               

               
Conread position:
               
81-220
               

               
Cow position:
               
chr27:18861048-18860907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
81-294
               

               
Cow position:
               
chr27:1183655-1183874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
150, 73
               

               
Conread position:
               
81-452
               

               
Cow position:
               
chr27:20796005-20795619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 87
               

               
Conread position:
               
81-484
               

               
Cow position:
               
chr27:20481179-20481565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 98
               

               
Conread position:
               
81-534
               

               
Cow position:
               
chr27:27558309-27558768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
123, 36
               

               
Conread position:
               
82-205
               

               
Cow position:
               
chr27:29502914-29503036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
82-294
               

               
Cow position:
               
chr27:20369259-20369034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 108
               

               
Conread position:
               
82-532
               

               
Cow position:
               
chr27:26218915-26218469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
136, 18
               

               
Conread position:
               
83-181
               

               
Cow position:
               
chr27:12630667-12630569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
83-213
               

               
Cow position:
               
chr27:18741312-18741439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
83-422
               

               
Cow position:
               
chr27:24321407-24321049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 33
               

               
Conread position:
               
83-450
               

               
Cow position:
               
chr27:30354126-30354512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
142, 34
               

               
Conread position:
               
83-531
               

               
Cow position:
               
chr27:29038721-29039177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
65, 106
               

               
Conread position:
               
84-428
               

               
Cow position:
               
chr27:25998923-25998555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
138, 153
               

               
Conread position:
               
85-295
               

               
Cow position:
               
chr27:22771975-22771753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
86-531
               

               
Cow position:
               
chr27:26163594-26163145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
93, 55
               

               
Conread position:
               
87-191
               

               
Cow position:
               
chr27:1565041-1564938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
87-257
               

               
Cow position:
               
chr27:21452855-21453031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
130, 30
               

               
Conread position:
               
87-287
               

               
Cow position:
               
chr27:23137382-23137184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
75, 54
               

               
Conread position:
               
87-348
               

               
Cow position:
               
chr27:27528146-27528408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
131, 99
               

               
Conread position:
               
87-426
               

               
Cow position:
               
chr27:20553932-20553587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 89
               

               
Conread position:
               
87-506
               

               
Cow position:
               
chr27:19661158-19660697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
88-528
               

               
Cow position:
               
chr27:15668553-15669027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
89-233
               

               
Cow position:
               
chr27:7495470-7495323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
89-240
               

               
Cow position:
               
chr27:26406830-26406980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
132, 28
               

               
Conread position:
               
89-256
               

               
Cow position:
               
chr27:29830335-29830505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
89-261
               

               
Cow position:
               
chr27:707160-706994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
89-278
               

               
Cow position:
               
chr27:2682930-2683119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
142, 123
               

               
Conread position:
               
89-292
               

               
Cow position:
               
chr27:26046316-26046107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
124, 80
               

               
Conread position:
               
89-295
               

               
Cow position:
               
chr27:16550685-16550477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
129, 168
               

               
Conread position:
               
89-315
               

               
Cow position:
               
chr27:16871706-16871931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
170, 27
               

               
Conread position:
               
89-330
               

               
Cow position:
               
chr27:26239237-26238998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
132, 51
               

               
Conread position:
               
89-336
               

               
Cow position:
               
chr27:17926424-17926659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
142, 27
               

               
Conread position:
               
89-450
               

               
Cow position:
               
chr27:22454565-22454948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
5, 99
               

               
Conread position:
               
89-520
               

               
Cow position:
               
chr27:28164198-28164624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
89-522
               

               
Cow position:
               
chr27:24342117-24341674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 27
               

               
Conread position:
               
90-249
               

               
Cow position:
               
chr27:17924097-17924256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 10
               

               
Conread position:
               
90-511
               

               
Cow position:
               
chr27:30605895-30605463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 109
               

               
Conread position:
               
91-445
               

               
Cow position:
               
chr27:30359606-30359240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
124, 52
               

               
Conread position:
               
92-239
               

               
Cow position:
               
chr27:8273450-8273303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
80, 44
               

               
Conread position:
               
92-242
               

               
Cow position:
               
chr27:13847849-13847701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
126, 93
               

               
Conread position:
               
94-261
               

               
Cow position:
               
chr27:29283203-29283366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
121, 6
               

               
Conread position:
               
94-292
               

               
Cow position:
               
chr27:14435753-14435546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 43
               

               
Conread position:
               
95-435
               

               
Cow position:
               
chr27:1498521-1498161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
123, 68
               

               
Conread position:
               
95-449
               

               
Cow position:
               
chr27:18593475-18593109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 22
               

               
Conread position:
               
95-452
               

               
Cow position:
               
chr27:25277342-25276972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
96-244
               

               
Cow position:
               
chr27:26945104-26944953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
96-294
               

               
Cow position:
               
chr27:18215262-18215055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
96-330
               

               
Cow position:
               
chr27:1884244-1884009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
97-239
               

               
Cow position:
               
chr27:31267075-31267217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
118, 93
               

               
Conread position:
               
97-245
               

               
Cow position:
               
chr27:30436465-30436314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
97-253
               

               
Cow position:
               
chr27:26799350-26799513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
97-323
               

               
Cow position:
               
chr27:26885046-26885281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
97-543
               

               
Cow position:
               
chr27:20354785-20354331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 74
               

               
Conread position:
               
98-293
               

               
Cow position:
               
chr27:29251084-29250882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
99-291
               

               
Cow position:
               
chr27:27055781-27055580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
99-294
               

               
Cow position:
               
chr27:26625329-26625134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
99-504
               

               
Cow position:
               
chr27:19685511-19685939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
99-522
               

               
Cow position:
               
chr27:27245149-27245608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 17
               

               
Conread position:
               
99-531
               

               
Cow position:
               
chr27:19546301-19546777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
100-261
               

               
Cow position:
               
chr27:24027174-24027017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
53, 88
               

               
Conread position:
               
100-293
               

               
Cow position:
               
chr27:28061560-28061756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
100-531
               

               
Cow position:
               
chr27:27003079-27003517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
118, 77
               

               
Conread position:
               
103-261
               

               
Cow position:
               
chr27:18030860-18031020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
115, 24
               

               
Conread position:
               
103-294
               

               
Cow position:
               
chr27:21569644-21569840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
138, 82
               

               
Conread position:
               
103-531
               

               
Cow position:
               
chr27:19497074-19496622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
137, 93
               

               
Conread position:
               
104-362
               

               
Cow position:
               
chr27:910886-911158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
129, 94
               

               
Conread position:
               
104-544
               

               
Cow position:
               
chr27:30915200-30914737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 82
               

               
Conread position:
               
105-294
               

               
Cow position:
               
chr27:6037319-6037126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
105-531
               

               
Cow position:
               
chr27:30843881-30844309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
111, 56
               

               
Conread position:
               
107-262
               

               
Cow position:
               
chr27:23558189-23558347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
107-426
               

               
Cow position:
               
chr27:21213960-21213643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
169, 55
               

               
Conread position:
               
108-220
               

               
Cow position:
               
chr27:23736284-23736172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-261
               

               
Cow position:
               
chr27:18739580-18739427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
104, 66
               

               
Conread position:
               
110-590
               

               
Cow position:
               
chr27:16705439-16704936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 64
               

               
Conread position:
               
111-408
               

               
Cow position:
               
chr27:11296449-11296143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
107, 194
               

               
Conread position:
               
112-261
               

               
Cow position:
               
chr27:30989652-30989802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
112-294
               

               
Cow position:
               
chr27:20592174-20591984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
102, 73
               

               
Conread position:
               
112-428
               

               
Cow position:
               
chr27:20036938-20037261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
106, 64
               

               
Conread position:
               
112-452
               

               
Cow position:
               
chr27:30988989-30988624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
14, 99
               

               
Conread position:
               
113-233
               

               
Cow position:
               
chr27:68252-68371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 7
               

               
Conread position:
               
113-289
               

               
Cow position:
               
chr27:30670927-30670750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
114-260
               

               
Cow position:
               
chr27:31499256-31499111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
104, 66
               

               
Conread position:
               
114-531
               

               
Cow position:
               
chr27:22547216-22547644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 262
               

               
Conread position:
               
117-533
               

               
Cow position:
               
chr27:28496191-28496626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 13
               

               
Conread position:
               
117-537
               

               
Cow position:
               
chr27:13252195-13251769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 202
               

               
Conread position:
               
118-253
               

               
Cow position:
               
chr27:6052283-6052146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
119-285
               

               
Cow position:
               
chr27:6788142-6787972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
120-339
               

               
Cow position:
               
chr27:27550565-27550792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
140, 65
               

               
Conread position:
               
123-394
               

               
Cow position:
               
chr27:4067-3784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
146, 222
               

               
Conread position:
               
124-517
               

               
Cow position:
               
chr27:27613460-27613840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 70
               

               
Conread position:
               
128-433
               

               
Cow position:
               
chr27:9169470-9169792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 63
               

               
Conread position:
               
130-509
               

               
Cow position:
               
chr27:15408871-15409259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 53
               

               
Conread position:
               
130-520
               

               
Cow position:
               
chr27:13841549-13841118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
131-233
               

               
Cow position:
               
chr27:24357437-24357333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
132-253
               

               
Cow position:
               
chr27:11562971-11563093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
133-294
               

               
Cow position:
               
chr27:18434301-18434467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
136-257
               

               
Cow position:
               
chr27:26322520-26322397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
136-348
               

               
Cow position:
               
chr27:22268671-22268450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
82, 174
               

               
Conread position:
               
136-452
               

               
Cow position:
               
chr27:15643342-15643001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
82, 246
               

               
Conread position:
               
136-518
               

               
Cow position:
               
chr27:26426375-26425980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 361
               

               
Conread position:
               
136-547
               

               
Cow position:
               
chr27:20748859-20749269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
137-353
               

               
Cow position:
               
chr27:154533-154291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
137-410
               

               
Cow position:
               
chr27:23662439-23662721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 227
               

               
Conread position:
               
139-531
               

               
Cow position:
               
chr27:4944365-4944763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 111
               

               
Conread position:
               
140-531
               

               
Cow position:
               
chr27:20046040-20045642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
143-253
               

               
Cow position:
               
chr27:12371191-12371304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
144-257
               

               
Cow position:
               
chr27:19668630-19668747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
144-426
               

               
Cow position:
               
chr27:27270379-27270687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
144-523
               

               
Cow position:
               
chr27:29431619-29431225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 136
               

               
Conread position:
               
144-528
               

               
Cow position:
               
chr27:30871901-30872313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
144-531
               

               
Cow position:
               
chr27:16781023-16780603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
145-537
               

               
Cow position:
               
chr27:14343310-14343697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 28
               

               
Conread position:
               
146-539
               

               
Cow position:
               
chr27:19896913-19896500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 98
               

               
Conread position:
               
147-502
               

               
Cow position:
               
chr27:23891093-23890706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
75, 43
               

               
Conread position:
               
148-506
               

               
Cow position:
               
chr27:22735447-22735825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
148-522
               

               
Cow position:
               
chr27:22513520-22513930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
151-522
               

               
Cow position:
               
chr27:427124-426722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 232
               

               
Conread position:
               
153-529
               

               
Cow position:
               
chr27:7649433-7649844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
18, 351
               

               
Conread position:
               
155-514
               

               
Cow position:
               
chr27:3306921-3306547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
104, 293
               

               
Conread position:
               
159-534
               

               
Cow position:
               
chr27:26481074-26481457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
160-452
               

               
Cow position:
               
chr27:16589570-16589876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 45
               

               
Conread position:
               
163-531
               

               
Cow position:
               
chr27:17331642-17331236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
55, 269
               

               
Conread position:
               
170-548
               

               
Cow position:
               
chr27:16103936-16103538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
173-523
               

               
Cow position:
               
chr27:19500099-19500484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
19, 267
               

               
Conread position:
               
177-530
               

               
Cow position:
               
chr27:8168300-8168680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
41, 329
               

               
Conread position:
               
178-445
               

               
Cow position:
               
chr27:22569898-22569620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
188-531
               

               
Cow position:
               
chr27:7614970-7615326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 243
               

               
Conread position:
               
191-506
               

               
Cow position:
               
chr27:11160111-11159784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 127
               

               
Conread position:
               
194-531
               

               
Cow position:
               
chr27:26226178-26226543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
26, 245
               

               
Conread position:
               
196-504
               

               
Cow position:
               
chr27:27694662-27695004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
18, 192
               

               
Conread position:
               
204-425
               

               
Cow position:
               
chr27:20656532-20656763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
204-522
               

               
Cow position:
               
chr27:23594418-23594072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 190
               

               
Conread position:
               
204-531
               

               
Cow position:
               
chr27:22386972-22386631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
14, 244
               

               
Conread position:
               
205-518
               

               
Cow position:
               
chr27:26087392-26087077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
56, 10
               

               
Conread position:
               
217-426
               

               
Cow position:
               
chr27:673957-674175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
217-474
               

               
Cow position:
               
chr27:26506810-26506544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
230-546
               

               
Cow position:
               
chr27:11480585-11480909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
82, 7
               

               
Conread position:
               
238-447
               

               
Cow position:
               
chr27:26407099-26407322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 145
               

               
Conread position:
               
242-533
               

               
Cow position:
               
chr27:28164436-28164731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
186, 0
               

               
Conread position:
               
246-531
               

               
Cow position:
               
chr27:24240404-24240096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
255-518
               

               
Cow position:
               
chr27:212986-212708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
259-529
               

               
Cow position:
               
chr27:26852553-26852838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 123
               

               
Conread position:
               
274-531
               

               
Cow position:
               
chr27:24035266-24035533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
278-443
               

               
Cow position:
               
chr27:12710261-12710086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 140
               

               
Conread position:
               
280-529
               

               
Cow position:
               
chr27:26121762-26121500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
280-531
               

               
Cow position:
               
chr27:5553469-5553218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 36
               

               
Conread position:
               
283-452
               

               
Cow position:
               
chr27:24305431-24305264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
143, 31
               

               
Conread position:
               
283-566
               

               
Cow position:
               
chr27:18882646-18882364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
147, 12
               

               
Conread position:
               
284-519
               

               
Cow position:
               
chr27:27055282-27055052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
142, 30
               

               
Conread position:
               
284-522
               

               
Cow position:
               
chr27:20092838-20093060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
284-534
               

               
Cow position:
               
chr27:23994425-23994674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
146, 26
               

               
Conread position:
               
287-398
               

               
Cow position:
               
chr27:21130299-21130189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
289-531
               

               
Cow position:
               
chr27:31004933-31004685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
291-444
               

               
Cow position:
               
chr27:4720127-4720278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
137, 24
               

               
Conread position:
               
291-501
               

               
Cow position:
               
chr27:26239014-26238798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
134, 11
               

               
Conread position:
               
291-522
               

               
Cow position:
               
chr27:6925078-6924833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
291-531
               

               
Cow position:
               
chr27:23560042-23560288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
291-541
               

               
Cow position:
               
chr27:11323318-11323063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
134, 12
               

               
Conread position:
               
292-452
               

               
Cow position:
               
chr27:22348478-22348316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
292-452
               

               
Cow position:
               
chr27:30489422-30489584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
292-529
               

               
Cow position:
               
chr27:23485199-23484962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
292-531
               

               
Cow position:
               
chr27:20517646-20517397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
134, 22
               

               
Conread position:
               
293-529
               

               
Cow position:
               
chr27:6106686-6106450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
133, 22
               

               
Conread position:
               
293-532
               

               
Cow position:
               
chr27:27740301-27740550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 9
               

               
Conread position:
               
294-530
               

               
Cow position:
               
chr27:26437131-26437377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
294-532
               

               
Cow position:
               
chr27:28478567-28478323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
6, 21
               

               
Conread position:
               
295-521
               

               
Cow position:
               
chr27:29164755-29164529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
138, 24
               

               
Conread position:
               
295-522
               

               
Cow position:
               
chr27:590778-591015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
132, 15
               

               
Conread position:
               
295-550
               

               
Cow position:
               
chr27:20719273-20719008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
130, 19
               

               
Conread position:
               
295-568
               

               
Cow position:
               
chr27:19508997-19508719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 7
               

               
Conread position:
               
297-526
               

               
Cow position:
               
chr27:24693397-24693167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
298-519
               

               
Cow position:
               
chr27:15002992-15003223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
299-511
               

               
Cow position:
               
chr27:23107923-23108138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
302-522
               

               
Cow position:
               
chr27:24440242-24440464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
13, 153
               

               
Conread position:
               
302-536
               

               
Cow position:
               
chr27:12459263-12459032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
126, 38
               

               
Conread position:
               
303-438
               

               
Cow position:
               
chr27:31378196-31378064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
311-456
               

               
Cow position:
               
chr27:237239-237097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
311-488
               

               
Cow position:
               
chr27:28242944-28242765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
115, 163
               

               
Conread position:
               
311-512
               

               
Cow position:
               
chr27:30455964-30455756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
311-514
               

               
Cow position:
               
chr27:7425218-7425427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
311-517
               

               
Cow position:
               
chr27:20897055-20897262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
117, 53
               

               
Conread position:
               
311-518
               

               
Cow position:
               
chr27:11982676-11982891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
119, 77
               

               
Conread position:
               
311-522
               

               
Cow position:
               
chr27:15332325-15332537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 105
               

               
Conread position:
               
311-529
               

               
Cow position:
               
chr27:10598959-10598734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
116, 107
               

               
Conread position:
               
311-530
               

               
Cow position:
               
chr27:15865577-15865352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
311-531
               

               
Cow position:
               
chr27:20812875-20812668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
311-531
               

               
Cow position:
               
chr27:31557047-31556839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
311-534
               

               
Cow position:
               
chr27:7343458-7343687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
87, 109
               

               
Conread position:
               
311-536
               

               
Cow position:
               
chr27:31169140-31169367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
129, 100
               

               
Conread position:
               
311-537
               

               
Cow position:
               
chr27:788827-789070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
116, 210
               

               
Conread position:
               
311-537
               

               
Cow position:
               
chr27:10404146-10404378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
115, 42
               

               
Conread position:
               
311-539
               

               
Cow position:
               
chr27:12947821-12948062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
312-453
               

               
Cow position:
               
chr27:6302499-6302642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
114, 69
               

               
Conread position:
               
312-506
               

               
Cow position:
               
chr27:435203-435001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
80, 129
               

               
Conread position:
               
312-506
               

               
Cow position:
               
chr27:26489939-26490136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
312-518
               

               
Cow position:
               
chr27:22225626-22225812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
312-521
               

               
Cow position:
               
chr27:6241223-6241438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 192
               

               
Conread position:
               
312-522
               

               
Cow position:
               
chr27:11561745-11561528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
109, 191
               

               
Conread position:
               
312-522
               

               
Cow position:
               
chr27:16512202-16512414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 155
               

               
Conread position:
               
312-522
               

               
Cow position:
               
chr27:26111945-26112166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
312-523
               

               
Cow position:
               
chr27:29319380-29319154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
312-527
               

               
Cow position:
               
chr27:29388641-29388420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
312-529
               

               
Cow position:
               
chr27:9977654-9977432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
312-530
               

               
Cow position:
               
chr27:15867365-15867136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
312-534
               

               
Cow position:
               
chr27:31386661-31386888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 214
               

               
Conread position:
               
312-536
               

               
Cow position:
               
chr27:26793814-26794047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
312-538
               

               
Cow position:
               
chr27:29597782-29598008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
113, 18
               

               
Conread position:
               
312-542
               

               
Cow position:
               
chr27:29593660-29593890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
114, 51
               

               
Conread position:
               
313-505
               

               
Cow position:
               
chr27:6319887-6319693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
313-522
               

               
Cow position:
               
chr27:18435165-18435377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
313-529
               

               
Cow position:
               
chr27:14269375-14269586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
116, 65
               

               
Conread position:
               
313-529
               

               
Cow position:
               
chr27:16965540-16965317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
117, 16
               

               
Conread position:
               
313-529
               

               
Cow position:
               
chr27:22245594-22245389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
313-530
               

               
Cow position:
               
chr27:26853392-26853606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
115, 50
               

               
Conread position:
               
313-531
               

               
Cow position:
               
chr27:20514787-20514566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
313-536
               

               
Cow position:
               
chr27:8790773-8791002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 159
               

               
Conread position:
               
314-451
               

               
Cow position:
               
chr27:11466498-11466636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
314-512
               

               
Cow position:
               
chr27:26323415-26323205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
314-522
               

               
Cow position:
               
chr27:6162443-6162650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
314-522
               

               
Cow position:
               
chr27:23957483-23957271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
314-536
               

               
Cow position:
               
chr27:19452969-19452740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
112, 219
               

               
Conread position:
               
317-521
               

               
Cow position:
               
chr27:31210511-31210303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
106, 40
               

               
Conread position:
               
318-531
               

               
Cow position:
               
chr27:20888683-20888479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
318-533
               

               
Cow position:
               
chr27:24223915-24223698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
43, 55
               

               
Conread position:
               
319-514
               

               
Cow position:
               
chr27:17102858-17102661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
111, 81
               

               
Conread position:
               
320-543
               

               
Cow position:
               
chr27:20770567-20770782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
106, 127
               

               
Conread position:
               
323-530
               

               
Cow position:
               
chr27:19576365-19576577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
103, 199
               

               
Conread position:
               
323-543
               

               
Cow position:
               
chr27:29615000-29614774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
323-560
               

               
Cow position:
               
chr27:26400763-26401004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
107, 135
               

               
Conread position:
               
325-511
               

               
Cow position:
               
chr27:232510-232315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
97, 87
               

               
Conread position:
               
326-504
               

               
Cow position:
               
chr27:26504257-26504075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 37
               

               
Conread position:
               
329-530
               

               
Cow position:
               
chr27:10581481-10581279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
329-530
               

               
Cow position:
               
chr27:13204411-13204210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
99, 35
               

               
Conread position:
               
329-531
               

               
Cow position:
               
chr27:11134038-11133832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
330-506
               

               
Cow position:
               
chr27:21025637-21025466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
330-522
               

               
Cow position:
               
chr27:12284945-12284746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
330-530
               

               
Cow position:
               
chr27:5539744-5539949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
93, 84
               

               
Conread position:
               
330-531
               

               
Cow position:
               
chr27:1184226-1184431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
99, 164
               

               
Conread position:
               
330-532
               

               
Cow position:
               
chr27:22792783-22792577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
92, 82
               

               
Conread position:
               
334-439
               

               
Cow position:
               
chr27:9697600-9697493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
334-506
               

               
Cow position:
               
chr27:15859350-15859528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
94, 29
               

               
Conread position:
               
334-529
               

               
Cow position:
               
chr27:2949380-2949568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
92, 47
               

               
Conread position:
               
334-530
               

               
Cow position:
               
chr27:19741461-19741646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
334-531
               

               
Cow position:
               
chr27:16047551-16047743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 95
               

               
Conread position:
               
334-592
               

               
Cow position:
               
chr27:4398544-4398804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
94, 111
               

               
Conread position:
               
335-543
               

               
Cow position:
               
chr27:27528874-27529081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 151
               

               
Conread position:
               
337-521
               

               
Cow position:
               
chr27:20325295-20325111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
87, 104
               

               
Conread position:
               
337-528
               

               
Cow position:
               
chr27:20048578-20048386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
93, 185
               

               
Conread position:
               
338-526
               

               
Cow position:
               
chr27:1067511-1067325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
88, 114
               

               
Conread position:
               
338-531
               

               
Cow position:
               
chr27:16246743-16246551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
339-522
               

               
Cow position:
               
chr27:18491498-18491320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
113, 147
               

               
Conread position:
               
342-529
               

               
Cow position:
               
chr27:5781027-5780850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
344-511
               

               
Cow position:
               
chr27:26909654-26909824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
344-516
               

               
Cow position:
               
chr27:20325081-20324898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
344-529
               

               
Cow position:
               
chr27:11208617-11208812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
344-536
               

               
Cow position:
               
chr27:20081192-20081392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
344-537
               

               
Cow position:
               
chr27:24358270-24358077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
85, 51
               

               
Conread position:
               
344-538
               

               
Cow position:
               
chr27:6151235-6151051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
345-521
               

               
Cow position:
               
chr27:26118436-26118251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
345-531
               

               
Cow position:
               
chr27:19557325-19557143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 155
               

               
Conread position:
               
346-531
               

               
Cow position:
               
chr27:17908324-17908510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 48
               

               
Conread position:
               
346-531
               

               
Cow position:
               
chr27:30884963-30884772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 164
               

               
Conread position:
               
346-532
               

               
Cow position:
               
chr27:22497957-22497773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 84
               

               
Conread position:
               
346-565
               

               
Cow position:
               
chr27:24303882-24303653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 66
               

               
Conread position:
               
347-514
               

               
Cow position:
               
chr27:21951044-21951219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
347-543
               

               
Cow position:
               
chr27:26940013-26939809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
348-517
               

               
Cow position:
               
chr27:27449952-27450125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
348-522
               

               
Cow position:
               
chr27:3498484-3498309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 106
               

               
Conread position:
               
350-506
               

               
Cow position:
               
chr27:23177381-23177543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
350-507
               

               
Cow position:
               
chr27:23477877-23477716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 64
               

               
Conread position:
               
350-523
               

               
Cow position:
               
chr27:25382220-25382385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
79, 133
               

               
Conread position:
               
351-509
               

               
Cow position:
               
chr27:31031385-31031233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
351-526
               

               
Cow position:
               
chr27:9253183-9253362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
77, 170
               

               
Conread position:
               
351-528
               

               
Cow position:
               
chr27:26984092-26983911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
29, 175
               

               
Conread position:
               
352-517
               

               
Cow position:
               
chr27:29183287-29183468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
353-521
               

               
Cow position:
               
chr27:23100720-23100889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
74, 144
               

               
Conread position:
               
354-506
               

               
Cow position:
               
chr27:641118-641268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
354-516
               

               
Cow position:
               
chr27:30444753-30444915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
76, 117
               

               
Conread position:
               
354-529
               

               
Cow position:
               
chr27:31153630-31153809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 141
               

               
Conread position:
               
354-594
               

               
Cow position:
               
chr27:31183503-31183252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 161
               

               
Conread position:
               
355-525
               

               
Cow position:
               
chr27:28476187-28476358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
78, 148
               

               
Conread position:
               
355-531
               

               
Cow position:
               
chr27:22748254-22748068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
355-532
               

               
Cow position:
               
chr27:26317993-26317808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 145
               

               
Conread position:
               
356-536
               

               
Cow position:
               
chr27:11528856-11528668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
357-526
               

               
Cow position:
               
chr27:178787-178612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
357-531
               

               
Cow position:
               
chr27:15434249-15434077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
73, 132
               

               
Conread position:
               
361-522
               

               
Cow position:
               
chr27:24755525-24755364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
364-524
               

               
Cow position:
               
chr27:21661053-21660886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
370-515
               

               
Cow position:
               
chr27:31157723-31157570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
370-522
               

               
Cow position:
               
chr27:28062287-28062441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
371-522
               

               
Cow position:
               
chr27:18688499-18688659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 43
               

               
Conread position:
               
371-529
               

               
Cow position:
               
chr27:18646243-18646403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
371-530
               

               
Cow position:
               
chr27:16505000-16505160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
59, 91
               

               
Conread position:
               
371-533
               

               
Cow position:
               
chr27:19074112-19074283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
372-530
               

               
Cow position:
               
chr27:26467650-26467816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
372-532
               

               
Cow position:
               
chr27:21101381-21101548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
58, 156
               

               
Conread position:
               
372-546
               

               
Cow position:
               
chr27:28015823-28016004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
58, 156
               

               
Conread position:
               
373-518
               

               
Cow position:
               
chr27:20561490-20561345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
373-530
               

               
Cow position:
               
chr27:18873956-18873799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
375-521
               

               
Cow position:
               
chr27:22150788-22150939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
376-529
               

               
Cow position:
               
chr27:4486872-4487035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 38
               

               
Conread position:
               
376-531
               

               
Cow position:
               
chr27:21054365-21054202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
54, 153
               

               
Conread position:
               
377-513
               

               
Cow position:
               
chr27:624314-624456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
377-530
               

               
Cow position:
               
chr27:16275775-16275934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 151
               

               
Conread position:
               
377-531
               

               
Cow position:
               
chr27:3698768-3698929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
378-522
               

               
Cow position:
               
chr27:21447926-21448069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
378-531
               

               
Cow position:
               
chr27:27012602-27012438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
379-531
               

               
Cow position:
               
chr27:2934406-2934252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 95
               

               
Conread position:
               
379-531
               

               
Cow position:
               
chr27:19992051-19991891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
380-522
               

               
Cow position:
               
chr27:28192714-28192859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
48, 125
               

               
Conread position:
               
380-560
               

               
Cow position:
               
chr27:23862537-23862707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
386-518
               

               
Cow position:
               
chr27:4195443-4195312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 45
               

               
Conread position:
               
386-519
               

               
Cow position:
               
chr27:23527606-23527743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
387-523
               

               
Cow position:
               
chr27:24952060-24952200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 101
               

               
Conread position:
               
422-531
               

               
Cow position:
               
chr27:23471770-23471659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
425-531
               

               
Cow position:
               
chr27:14675322-14675428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
438-532
               

               
Cow position:
               
chr27:7212893-7212987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
439-531
               

               
Cow position:
               
chr27:25794867-25794959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.