Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8033E24.5
        

               Conread position:
               4-462
               

               Cow position:
               chr24:30483187-30483645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 395
               

               Conread position:
               461-599
               

               Cow position:
               chr24:30485754-30485892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               134
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               598-724
               

               Cow position:
               chr24:30488684-30488810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               118
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               724-841
               

               Cow position:
               chr24:30491884-30492001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               839-1022
               

               Cow position:
               chr24:30493052-30493235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1023-1187
               

               Cow position:
               chr24:30493715-30493879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1188-1305
               

               Cow position:
               chr24:30496756-30496873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1304-1415
               

               Cow position:
               chr24:30497882-30497993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1442-1960
               

               Cow position:
               chr24:30502188-30502712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 341
               
Show alignments to all cow chromosomes.