Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8033G06.5.5
        

               Conread position:
               1-162
               

               Cow position:
               chr11:72389140-72389295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               76, 105
               

               Conread position:
               159-274
               

               Cow position:
               chr11:72433035-72433154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               272-362
               

               Cow position:
               chr11:72443829-72443919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               512-671
               

               Cow position:
               chr11:72460151-72460312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               140
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               667-2387
               

               Cow position:
               chr11:72464637-72466367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               1772
               

               Alignm identity:
               1437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               926, 701
               

               Conread position:
               682-1274
               

               Cow position:
               chr11:85751601-85751018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               595
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               348, 143
               

               Conread position:
               837-1274
               

               Cow position:
               chr11:85616997-85616560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               272
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               68, 50
               

               Conread position:
               2457-3251
               

               Cow position:
               chr11:72466397-72467166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               807
               

               Alignm identity:
               637
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 223
               
Show alignments to all cow chromosomes.