Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8033K08.5
        

               Conread position:
               1-252
               

               Cow position:
               chr17:22552393-22552140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               238, 11
               

               Conread position:
               10-233
               

               Cow position:
               chr17:22452250-22452027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 12
               

               Conread position:
               10-262
               

               Cow position:
               chr17:22552469-22552214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               74, 93
               

               Conread position:
               16-235
               

               Cow position:
               chr17:22552211-22551992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               77, 87
               

               Conread position:
               19-246
               

               Cow position:
               chr17:22499171-22498942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               176, 171
               

               Conread position:
               22-252
               

               Cow position:
               chr17:22589876-22589642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               7, 176
               

               Conread position:
               28-233
               

               Cow position:
               chr17:22551695-22551490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               65, 76
               

               Conread position:
               28-252
               

               Cow position:
               chr17:22552283-22552056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               166, 155
               

               Conread position:
               28-253
               

               Cow position:
               chr17:22452316-22452088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               85, 79
               

               Conread position:
               28-256
               

               Cow position:
               chr17:22552031-22551800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 76
               
Show alignments to all cow chromosomes.