Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8033K08.5
        

               Conread position:
               1-221
               

               Cow position:
               chr24:17013284-17013504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-251
               

               Cow position:
               chr24:17070496-17070748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               102, 9
               

               Conread position:
               6-227
               

               Cow position:
               chr24:17036004-17035780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 96
               

               Conread position:
               7-172
               

               Cow position:
               chr24:17070837-17071002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               104, 92
               

               Conread position:
               10-246
               

               Cow position:
               chr24:17077964-17077726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 14
               

               Conread position:
               27-253
               

               Cow position:
               chr24:17013226-17013455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               212, 0
               

               Conread position:
               28-227
               

               Cow position:
               chr24:17036399-17036200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               85, 79
               

               Conread position:
               28-246
               

               Cow position:
               chr24:17078030-17077810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               86, 79
               

               Conread position:
               28-251
               

               Cow position:
               chr24:17070690-17070916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               75, 70
               

               Conread position:
               28-263
               

               Cow position:
               chr24:17070774-17071012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 32
               
Show alignments to all cow chromosomes.