Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8033K08.5 | 
| Conread position: | 17-253 | 
| Cow position: | chr6:49340623-49340863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 12, 174 | 
| Conread position: | 17-254 | 
| Cow position: | chr6:49341127-49341368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 12, 81 | 
| Conread position: | 22-251 | 
| Cow position: | chr6:49341048-49341281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 7, 76 | 
| Conread position: | 28-246 | 
| Cow position: | chr6:49340467-49340687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 71, 75 | 
| Conread position: | 28-246 | 
| Cow position: | chr6:49340719-49340939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 211, 0 | 
| Conread position: | 28-246 | 
| Cow position: | chr6:49340971-49341191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 85, 69 | 
| Conread position: | 28-251 | 
| Cow position: | chr6:49341223-49341448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 62, 67 | 
| Conread position: | 28-254 | 
| Cow position: | chr6:49340551-49340780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 85, 73 | 
Show alignments to all cow chromosomes.
