Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8033N04.3 |
| Conread position: | 147-575 |
| Cow position: | chr13:22125427-22125853 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 147-588 |
| Cow position: | chr13:24163153-24163592 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 289 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 148-506 |
| Cow position: | chr13:39930810-39931166 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 247 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 61, 56 |
| Conread position: | 148-560 |
| Cow position: | chr13:39930726-39931138 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 56 |
| Conread position: | 148-578 |
| Cow position: | chr13:22125175-22125605 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 279 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 57, 67 |
| Conread position: | 148-578 |
| Cow position: | chr13:24162901-24163331 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 280 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 57, 67 |
| Conread position: | 148-578 |
| Cow position: | chr13:39930642-39931072 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 56 |
| Conread position: | 150-546 |
| Cow position: | chr13:22125513-22125909 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 161, 153 |
| Conread position: | 150-546 |
| Cow position: | chr13:24163239-24163635 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 256 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 57, 67 |
| Conread position: | 150-567 |
| Cow position: | chr13:22125345-22125762 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 276 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 198, 207 |
| Conread position: | 150-567 |
| Cow position: | chr13:24163071-24163488 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 207 |
| Conread position: | 150-572 |
| Cow position: | chr13:22125009-22125431 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-572 |
| Cow position: | chr13:24162735-24163157 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-578 |
| Cow position: | chr13:22124925-22125353 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 311 |
| Conread position: | 150-578 |
| Cow position: | chr13:24162483-24162911 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 63 |
| Conread position: | 150-578 |
| Cow position: | chr13:24162651-24163079 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 311 |
| Conread position: | 150-595 |
| Cow position: | chr13:22124841-22125287 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 430, 0 |
| Conread position: | 150-595 |
| Cow position: | chr13:24162567-24163013 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 430, 0 |
| Conread position: | 153-578 |
| Cow position: | chr13:22125096-22125521 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 85 |
| Conread position: | 153-578 |
| Cow position: | chr13:22125264-22125689 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 279, 288 |
| Conread position: | 153-578 |
| Cow position: | chr13:24162822-24163247 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-578 |
| Cow position: | chr13:24162990-24163415 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 280, 288 |
| Conread position: | 168-558 |
| Cow position: | chr13:22124691-22125081 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 253 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 49, 43 |
| Conread position: | 168-560 |
| Cow position: | chr13:24162417-24162809 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 49, 43 |
| Conread position: | 228-578 |
| Cow position: | chr13:39930638-39930988 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 241 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 120, 142 |
| Conread position: | 251-578 |
| Cow position: | chr13:39930577-39930904 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 97, 119 |
| Conread position: | 252-578 |
| Cow position: | chr13:22124691-22125017 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 110, 123 |
Show alignments to all cow chromosomes.