Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8033N04.3
        

               Conread position:
               143-578
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 10
               

               Conread position:
               147-575
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               300, 6
               

               Conread position:
               147-585
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               148-398
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               148-406
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 69
               

               Conread position:
               148-527
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               59, 69
               

               Conread position:
               148-533
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               255
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               59, 67
               

               Conread position:
               148-538
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               148-565
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               365, 359
               

               Conread position:
               148-566
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               148-566
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 65
               

               Conread position:
               148-574
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               56, 67
               

               Conread position:
               148-575
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 67
               

               Conread position:
               148-578
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               381, 390
               

               Conread position:
               148-578
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               148-578
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               148-578
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 65
               

               Conread position:
               148-578
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 233
               

               Conread position:
               148-588
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 306
               

               Conread position:
               149-566
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               150-402
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               241, 0
               

               Conread position:
               150-421
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               150-443
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               150-454
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               280, 273
               

               Conread position:
               150-454
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               150-496
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               138, 152
               

               Conread position:
               150-506
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 64
               

               Conread position:
               150-510
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               334, 0
               

               Conread position:
               150-527
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               351, 25
               

               Conread position:
               150-544
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 13
               

               Conread position:
               150-551
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               96, 14
               

               Conread position:
               150-565
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               316, 295
               

               Conread position:
               150-566
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               150-566
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 40
               

               Conread position:
               150-566
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               150-566
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 150
               

               Conread position:
               150-566
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               266
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               212, 216
               

               Conread position:
               150-575
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               150-575
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               150-575
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               150-575
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 235
               

               Conread position:
               150-575
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 319
               

               Conread position:
               150-575
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 64
               

               Conread position:
               150-575
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 60
               

               Conread position:
               150-575
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               276
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               57, 73
               

               Conread position:
               150-575
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               57, 67
               

               Conread position:
               150-575
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 67
               

               Conread position:
               150-575
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               319, 298
               

               Conread position:
               150-575
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 218
               

               Conread position:
               150-575
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               275
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               23, 28
               

               Conread position:
               150-575
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 301
               

               Conread position:
               150-576
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 55
               

               Conread position:
               150-578
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 229
               

               Conread position:
               150-578
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 62
               

               Conread position:
               150-578
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 61
               

               Conread position:
               150-578
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               150-578
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               311, 306
               

               Conread position:
               150-578
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 311
               

               Conread position:
               150-578
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 200
               

               Conread position:
               150-578
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               211, 51
               

               Conread position:
               150-578
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 301
               

               Conread position:
               150-578
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 61
               

               Conread position:
               150-578
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 61
               

               Conread position:
               150-578
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 61
               

               Conread position:
               150-578
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 28
               

               Conread position:
               150-591
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 315
               

               Conread position:
               150-592
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 39
               

               Conread position:
               150-592
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 152
               

               Conread position:
               150-592
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               150-592
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               430, 0
               

               Conread position:
               150-593
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               430, 0
               

               Conread position:
               150-603
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               150-617
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               451, 437
               

               Conread position:
               151-578
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               153-421
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               153-443
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               55, 62
               

               Conread position:
               153-566
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               153-574
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 60
               

               Conread position:
               153-575
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 60
               

               Conread position:
               153-578
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               153-578
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               155-574
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               156-575
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 45
               

               Conread position:
               156-578
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               277
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               7, 56
               

               Conread position:
               180-595
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               400, 0
               

               Conread position:
               186-588
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               394, 0
               

               Conread position:
               210-578
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               214-575
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 245
               

               Conread position:
               225-579
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               114, 121
               

               Conread position:
               227-578
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               113, 118
               

               Conread position:
               227-599
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               340, 0
               

               Conread position:
               231-575
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               226, 16
               

               Conread position:
               234-575
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 79
               

               Conread position:
               247-569
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 30
               

               Conread position:
               252-578
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-575
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               254, 258
               

               Conread position:
               309-554
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               199, 204
               

               Conread position:
               326-575
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               353-606
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               52, 7
               
Show alignments to all cow chromosomes.