Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8033N04.3
        

               Conread position:
               131-588
               

               Cow position:
               chr15:19139174-19138718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               244, 11
               

               Conread position:
               150-528
               

               Cow position:
               chr15:48468864-48469239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               48, 65
               

               Conread position:
               150-544
               

               Cow position:
               chr15:48468603-48469006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               259
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               166, 194
               

               Conread position:
               150-568
               

               Cow position:
               chr15:19139073-19138655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               267
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               388, 382
               

               Conread position:
               150-575
               

               Cow position:
               chr15:48468519-48468953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               46, 54
               

               Conread position:
               168-489
               

               Cow position:
               chr15:48468453-48468773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               112, 118
               

               Conread position:
               176-506
               

               Cow position:
               chr15:48468806-48469133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               200-566
               

               Cow position:
               chr15:19139359-19138993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               138, 168
               

               Conread position:
               237-569
               

               Cow position:
               chr15:19139154-19138822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               252-531
               

               Cow position:
               chr15:48468453-48468732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               125, 113
               
Show alignments to all cow chromosomes.