Cow genome map

Conread name: Ss1.1-Pig4-TMW8033N04.3

Conread position: 112-578
Cow position: chr17:44467481-44467951 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 14

Conread position: 148-506
Cow position: chr17:22552267-22551909 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 218
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 236, 212

Conread position: 148-526
Cow position: chr17:22590189-22589811 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 231
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 140, 151

Conread position: 148-527
Cow position: chr17:22590105-22589726 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 227
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 148-565
Cow position: chr17:22552015-22551598 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 253
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 297, 306

Conread position: 148-565
Cow position: chr17:22553107-22552690 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 249
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 42

Conread position: 148-575
Cow position: chr17:22552771-22552344 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 255
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 308, 318

Conread position: 148-578
Cow position: chr17:22552855-22552425 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 256
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 148-578
Cow position: chr17:44467353-44467783 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 5

Conread position: 150-503
Cow position: chr17:44468027-44468380 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 150-547
Cow position: chr17:22552937-22552540 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 242
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 150-555
Cow position: chr17:41440956-41440551 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 150-557
Cow position: chr17:41440788-41440381 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 89

Conread position: 150-566
Cow position: chr17:44467943-44468359 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 311

Conread position: 150-575
Cow position: chr17:22552517-22552092 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 256
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 150-575
Cow position: chr17:44467775-44468200 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 59

Conread position: 150-578
Cow position: chr17:44467607-44468035 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 60

Conread position: 150-578
Cow position: chr17:44467691-44468119 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 127

Conread position: 150-578
Cow position: chr17:44467859-44468287 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 150-588
Cow position: chr17:41441040-41440601 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 174

Conread position: 150-648
Cow position: chr17:41440620-41440123 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 71

Conread position: 153-528
Cow position: chr17:44467442-44467817 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 141

Conread position: 154-575
Cow position: chr17:41440700-41440279 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 156-575
Cow position: chr17:41441118-41440699 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 252

Conread position: 158-593
Cow position: chr17:41440864-41440428 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 53

Conread position: 228-559
Cow position: chr17:22452220-22451889 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 205
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 234-559
Cow position: chr17:22590187-22589862 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 198
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 68

Conread position: 234-566
Cow position: chr17:22552937-22552605 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 203
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 240-588
Cow position: chr17:41441118-41440769 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 252

Conread position: 242-484
Cow position: chr17:45350821-45350579 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 125, 134

Show alignments to all cow chromosomes.