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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8033N04.3
        

               
Conread position:
               
140-421
               

               
Cow position:
               
chr18:22843611-22843330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 29
               

               
Conread position:
               
141-558
               

               
Cow position:
               
chr18:49033055-49032638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
142-578
               

               
Cow position:
               
chr18:55497714-55497278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
145-566
               

               
Cow position:
               
chr18:40306165-40306585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
147-530
               

               
Cow position:
               
chr18:53610385-53610003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 6
               

               
Conread position:
               
147-578
               

               
Cow position:
               
chr18:56316046-56316477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
148-314
               

               
Cow position:
               
chr18:56391820-56391654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
148-444
               

               
Cow position:
               
chr18:50058869-50058573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
148-445
               

               
Cow position:
               
chr18:55442348-55442645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
148-504
               

               
Cow position:
               
chr18:50282008-50282364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
148-534
               

               
Cow position:
               
chr18:50083532-50083918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
297, 309
               

               
Conread position:
               
148-541
               

               
Cow position:
               
chr18:50030819-50030420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
148-557
               

               
Cow position:
               
chr18:41948930-41948521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
141, 150
               

               
Conread position:
               
148-558
               

               
Cow position:
               
chr18:42791886-42792296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 68
               

               
Conread position:
               
148-558
               

               
Cow position:
               
chr18:50848501-50848911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 57
               

               
Conread position:
               
148-559
               

               
Cow position:
               
chr18:41949014-41948603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
140, 154
               

               
Conread position:
               
148-565
               

               
Cow position:
               
chr18:50848669-50849086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
140, 154
               

               
Conread position:
               
148-566
               

               
Cow position:
               
chr18:42792474-42792892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
148-566
               

               
Cow position:
               
chr18:53586749-53586331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
309, 321
               

               
Conread position:
               
148-566
               

               
Cow position:
               
chr18:55066944-55066526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
148-574
               

               
Cow position:
               
chr18:33064352-33063926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
309, 296
               

               
Conread position:
               
148-574
               

               
Cow position:
               
chr18:56329433-56329007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
148-574
               

               
Cow position:
               
chr18:56329517-56329091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 66
               

               
Conread position:
               
148-575
               

               
Cow position:
               
chr18:33064688-33064261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
148-575
               

               
Cow position:
               
chr18:42724338-42723911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
148-575
               

               
Cow position:
               
chr18:42724506-42724079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
191, 198
               

               
Conread position:
               
148-575
               

               
Cow position:
               
chr18:42744551-42744124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
297, 304
               

               
Conread position:
               
148-575
               

               
Cow position:
               
chr18:56329853-56329426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 198
               

               
Conread position:
               
148-578
               

               
Cow position:
               
chr18:42724422-42723992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
56, 65
               

               
Conread position:
               
148-578
               

               
Cow position:
               
chr18:42792306-42792736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
299, 318
               

               
Conread position:
               
148-578
               

               
Cow position:
               
chr18:49022728-49023158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
146, 153
               

               
Conread position:
               
148-578
               

               
Cow position:
               
chr18:49032964-49032534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
148-578
               

               
Cow position:
               
chr18:49033216-49032786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 62
               

               
Conread position:
               
148-578
               

               
Cow position:
               
chr18:50281756-50282186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
17, 21
               

               
Conread position:
               
148-578
               

               
Cow position:
               
chr18:52012277-52011847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
148-578
               

               
Cow position:
               
chr18:56316215-56316645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 61
               

               
Conread position:
               
148-578
               

               
Cow position:
               
chr18:56329937-56329507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 300
               

               
Conread position:
               
148-578
               

               
Cow position:
               
chr18:56330105-56329675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 63
               

               
Conread position:
               
149-600
               

               
Cow position:
               
chr18:49032711-49032257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
431, 0
               

               
Conread position:
               
150-362
               

               
Cow position:
               
chr18:54687742-54687954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
32, 40
               

               
Conread position:
               
150-389
               

               
Cow position:
               
chr18:56267376-56267137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-398
               

               
Cow position:
               
chr18:56391902-56391654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-438
               

               
Cow position:
               
chr18:1418338-1418628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
274, 0
               

               
Conread position:
               
150-443
               

               
Cow position:
               
chr18:51368098-51367806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
288, 0
               

               
Conread position:
               
150-443
               

               
Cow position:
               
chr18:54668611-54668316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 40
               

               
Conread position:
               
150-483
               

               
Cow position:
               
chr18:56267460-56267127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
295, 301
               

               
Conread position:
               
150-487
               

               
Cow position:
               
chr18:56329179-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-497
               

               
Cow position:
               
chr18:56316721-56317068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
30, 38
               

               
Conread position:
               
150-501
               

               
Cow position:
               
chr18:33064434-33064083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-509
               

               
Cow position:
               
chr18:55497370-55497010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 70
               

               
Conread position:
               
150-524
               

               
Cow position:
               
chr18:52011939-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-526
               

               
Cow position:
               
chr18:40306841-40307217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
230, 235
               

               
Conread position:
               
150-526
               

               
Cow position:
               
chr18:43048728-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
230, 235
               

               
Conread position:
               
150-527
               

               
Cow position:
               
chr18:50848755-50849132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
57, 73
               

               
Conread position:
               
150-532
               

               
Cow position:
               
chr18:50083870-50084252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 53
               

               
Conread position:
               
150-538
               

               
Cow position:
               
chr18:1418086-1418474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
133, 150
               

               
Conread position:
               
150-547
               

               
Cow position:
               
chr18:56128625-56129022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-553
               

               
Cow position:
               
chr18:22844285-22843879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
179, 307
               

               
Conread position:
               
150-558
               

               
Cow position:
               
chr18:42792140-42792548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-558
               

               
Cow position:
               
chr18:42792392-42792800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-558
               

               
Cow position:
               
chr18:50281926-50282334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
207, 226
               

               
Conread position:
               
150-558
               

               
Cow position:
               
chr18:53586915-53586507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
382, 390
               

               
Conread position:
               
150-559
               

               
Cow position:
               
chr18:42744381-42743972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
291, 301
               

               
Conread position:
               
150-559
               

               
Cow position:
               
chr18:42744633-42744224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-559
               

               
Cow position:
               
chr18:44398271-44397862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
143, 148
               

               
Conread position:
               
150-559
               

               
Cow position:
               
chr18:49032458-49032049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
150-559
               

               
Cow position:
               
chr18:50848839-50849248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
149, 144
               

               
Conread position:
               
150-559
               

               
Cow position:
               
chr18:55067026-55066617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
150-559
               

               
Cow position:
               
chr18:56329263-56328854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
150-565
               

               
Cow position:
               
chr18:33064266-33063851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
57, 63
               

               
Conread position:
               
150-565
               

               
Cow position:
               
chr18:40074939-40075354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 49
               

               
Conread position:
               
150-565
               

               
Cow position:
               
chr18:42792224-42792639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-565
               

               
Cow position:
               
chr18:53635624-53635209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 70
               

               
Conread position:
               
150-565
               

               
Cow position:
               
chr18:56128541-56128956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 70
               

               
Conread position:
               
150-565
               

               
Cow position:
               
chr18:56128709-56129124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-566
               

               
Cow position:
               
chr18:40075191-40075607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 90
               

               
Conread position:
               
150-566
               

               
Cow position:
               
chr18:40306253-40306669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
144, 151
               

               
Conread position:
               
150-566
               

               
Cow position:
               
chr18:40306757-40307173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-566
               

               
Cow position:
               
chr18:41948760-41948344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
319, 312
               

               
Conread position:
               
150-566
               

               
Cow position:
               
chr18:49032542-49032126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-566
               

               
Cow position:
               
chr18:52012107-52011691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-566
               

               
Cow position:
               
chr18:52012191-52011775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-566
               

               
Cow position:
               
chr18:53610299-53609883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-566
               

               
Cow position:
               
chr18:55497454-55497038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 156
               

               
Conread position:
               
150-567
               

               
Cow position:
               
chr18:22844030-22843610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
150-572
               

               
Cow position:
               
chr18:41948844-41948423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
417, 0
               

               
Conread position:
               
150-573
               

               
Cow position:
               
chr18:56316553-56316976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-574
               

               
Cow position:
               
chr18:40306673-40307097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
216, 210
               

               
Conread position:
               
150-574
               

               
Cow position:
               
chr18:42675237-42674813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
304, 316
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:33064518-33064093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
309, 319
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:33064854-33064429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:33064938-33064513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
212, 226
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:40306337-40306762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
314, 306
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:49032794-49032369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:49032878-49032453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 319
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:49033130-49032705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 319
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:49033298-49032873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 152
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:50030901-50030471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
103, 139
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:50281842-50282267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 222
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:53610467-53610042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 152
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:53635456-53635032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 54
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:53635792-53635367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 211
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:55497538-55497113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:56128373-56128798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 75
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:56316469-56316894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:56330019-56329594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 140
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:56391431-56391006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 230
               

               
Conread position:
               
150-575
               

               
Cow position:
               
chr18:56391515-56391090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 40
               

               
Conread position:
               
150-576
               

               
Cow position:
               
chr18:53509238-53509664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
155, 144
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:33064602-33064174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:40306421-40306849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
212, 220
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:40306925-40307353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
67, 63
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:49032626-49032198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 61
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:50848587-50849015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
55, 60
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:52012023-52011595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:52012359-52011931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 379
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:53610131-53609704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
60, 54
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:53635540-53635112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:53635876-53635448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 54
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:53635960-53635532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 235
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:53636044-53635616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:55497622-55497194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:56128121-56128549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 310
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:56128205-56128633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:56128289-56128717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 321
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:56128457-56128885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 156
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:56316133-56316561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:56316301-56316729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 152
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:56316385-56316813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:56316637-56317065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 362
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:56329347-56328919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 142
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:56329599-56329171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:56329683-56329255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
150-578
               

               
Cow position:
               
chr18:56329767-56329339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 315
               

               
Conread position:
               
150-592
               

               
Cow position:
               
chr18:53610215-53609772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
430, 0
               

               
Conread position:
               
150-593
               

               
Cow position:
               
chr18:56391263-56390820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 40
               

               
Conread position:
               
150-605
               

               
Cow position:
               
chr18:56391347-56390889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 60
               

               
Conread position:
               
152-527
               

               
Cow position:
               
chr18:22844367-22843989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 36
               

               
Conread position:
               
153-527
               

               
Cow position:
               
chr18:42675318-42674944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
141, 145
               

               
Conread position:
               
153-527
               

               
Cow position:
               
chr18:47846514-47846140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
153-538
               

               
Cow position:
               
chr18:51400535-51400920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
153-575
               

               
Cow position:
               
chr18:40306508-40306930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
153-578
               

               
Cow position:
               
chr18:56330184-56329759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 57
               

               
Conread position:
               
154-526
               

               
Cow position:
               
chr18:40306593-40306965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 50
               

               
Conread position:
               
154-574
               

               
Cow position:
               
chr18:1418174-1418594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
154-578
               

               
Cow position:
               
chr18:42693792-42693368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 59
               

               
Conread position:
               
155-566
               

               
Cow position:
               
chr18:47846596-47846185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
155-566
               

               
Cow position:
               
chr18:56494017-56494428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
54, 50
               

               
Conread position:
               
156-578
               

               
Cow position:
               
chr18:42693874-42693452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 62
               

               
Conread position:
               
158-443
               

               
Cow position:
               
chr18:54668687-54668402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 63
               

               
Conread position:
               
158-566
               

               
Cow position:
               
chr18:53586487-53586079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
159-578
               

               
Cow position:
               
chr18:56391590-56391171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 34
               

               
Conread position:
               
162-566
               

               
Cow position:
               
chr18:55523320-55523724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
281, 303
               

               
Conread position:
               
162-600
               

               
Cow position:
               
chr18:42724574-42724135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 18
               

               
Conread position:
               
165-581
               

               
Cow position:
               
chr18:40075290-40075706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
166-498
               

               
Cow position:
               
chr18:44817841-44818173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
273, 287
               

               
Conread position:
               
167-558
               

               
Cow position:
               
chr18:56267527-56267136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
167-573
               

               
Cow position:
               
chr18:53587066-53586660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
280, 296
               

               
Conread position:
               
168-566
               

               
Cow position:
               
chr18:54668845-54668447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
78, 64
               

               
Conread position:
               
175-565
               

               
Cow position:
               
chr18:49021676-49022066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
32, 39
               

               
Conread position:
               
176-511
               

               
Cow position:
               
chr18:56391960-56391628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
308, 0
               

               
Conread position:
               
186-526
               

               
Cow position:
               
chr18:41949312-41948972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
272, 280
               

               
Conread position:
               
186-566
               

               
Cow position:
               
chr18:53586963-53586583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
186-578
               

               
Cow position:
               
chr18:49033346-49032954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
187-547
               

               
Cow position:
               
chr18:1418039-1418399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
187-575
               

               
Cow position:
               
chr18:49022851-49023239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
78, 72
               

               
Conread position:
               
198-578
               

               
Cow position:
               
chr18:49022694-49023074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
141, 145
               

               
Conread position:
               
204-559
               

               
Cow position:
               
chr18:42985505-42985151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
173, 6
               

               
Conread position:
               
208-527
               

               
Cow position:
               
chr18:54668721-54668402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 25
               

               
Conread position:
               
212-481
               

               
Cow position:
               
chr18:54664064-54664332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
215-482
               

               
Cow position:
               
chr18:44818619-44818886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
168, 149
               

               
Conread position:
               
215-565
               

               
Cow position:
               
chr18:42724607-42724257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
241, 249
               

               
Conread position:
               
216-527
               

               
Cow position:
               
chr18:47846619-47846308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
216-578
               

               
Cow position:
               
chr18:53610485-53610123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
221-575
               

               
Cow position:
               
chr18:56267557-56267203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 16
               

               
Conread position:
               
226-538
               

               
Cow position:
               
chr18:33064022-33063710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
226-578
               

               
Cow position:
               
chr18:52012367-52012015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 243
               

               
Conread position:
               
227-558
               

               
Cow position:
               
chr18:50083443-50083774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
228-527
               

               
Cow position:
               
chr18:44817987-44818289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
127, 135
               

               
Conread position:
               
228-559
               

               
Cow position:
               
chr18:50059545-50059214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
138, 134
               

               
Conread position:
               
228-566
               

               
Cow position:
               
chr18:50281752-50282090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
228-566
               

               
Cow position:
               
chr18:55067116-55066778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
228-578
               

               
Cow position:
               
chr18:43048734-43048384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
325, 320
               

               
Conread position:
               
229-566
               

               
Cow position:
               
chr18:42744722-42744385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
143, 156
               

               
Conread position:
               
231-579
               

               
Cow position:
               
chr18:50059627-50059278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 295
               

               
Conread position:
               
233-488
               

               
Cow position:
               
chr18:54687741-54687996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
127, 137
               

               
Conread position:
               
233-553
               

               
Cow position:
               
chr18:22844031-22843711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
16, 20
               

               
Conread position:
               
234-547
               

               
Cow position:
               
chr18:50083534-50083847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
236-555
               

               
Cow position:
               
chr18:22844367-22844045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
261, 0
               

               
Conread position:
               
236-578
               

               
Cow position:
               
chr18:22843689-22843341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 107
               

               
Conread position:
               
237-575
               

               
Cow position:
               
chr18:50271464-50271802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 65
               

               
Conread position:
               
238-575
               

               
Cow position:
               
chr18:50281678-50282015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
239-575
               

               
Cow position:
               
chr18:50031061-50030726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 77
               

               
Conread position:
               
240-573
               

               
Cow position:
               
chr18:42693874-42693541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
111, 130
               

               
Conread position:
               
243-566
               

               
Cow position:
               
chr18:54668853-54668531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
251-574
               

               
Cow position:
               
chr18:53587066-53586743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
252-526
               

               
Cow position:
               
chr18:56128055-56128329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
252-539
               

               
Cow position:
               
chr18:53636110-53635823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
260-566
               

               
Cow position:
               
chr18:56391960-56391654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
290-578
               

               
Cow position:
               
chr18:53610495-53610207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
293-557
               

               
Cow position:
               
chr18:54664061-54664324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
152, 23
               

               
Conread position:
               
297-570
               

               
Cow position:
               
chr18:44817801-44818077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 89
               

               
Conread position:
               
300-566
               

               
Cow position:
               
chr18:42724606-42724340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
310-575
               

               
Cow position:
               
chr18:55067118-55066853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 153
               

               
Conread position:
               
312-578
               

               
Cow position:
               
chr18:52012448-52012183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
316-544
               

               
Cow position:
               
chr18:22844371-22844143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 63
               

               
Conread position:
               
318-566
               

               
Cow position:
               
chr18:54670267-54670016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
322-566
               

               
Cow position:
               
chr18:49033378-49033134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
346-575
               

               
Cow position:
               
chr18:56267600-56267371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
44, 36
               
Show alignments to all cow chromosomes.