Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8033N04.3 |
| Conread position: | 148-414 |
| Cow position: | chr19:23597447-23597713 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-579 |
| Cow position: | chr19:23649552-23649983 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-581 |
| Cow position: | chr19:23649468-23649901 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-403 |
| Cow position: | chr19:23650226-23650479 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 150-411 |
| Cow position: | chr19:14959080-14958819 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-498 |
| Cow position: | chr19:23597365-23597713 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 57, 64 |
| Conread position: | 150-526 |
| Cow position: | chr19:20635549-20635173 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 57, 65 |
| Conread position: | 150-527 |
| Cow position: | chr19:14960141-14959766 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 325, 0 |
| Conread position: | 150-539 |
| Cow position: | chr19:23597113-23597502 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-559 |
| Cow position: | chr19:14939988-14940397 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 297, 313 |
| Conread position: | 150-559 |
| Cow position: | chr19:23597197-23597606 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 54, 59 |
| Conread position: | 150-559 |
| Cow position: | chr19:23649638-23650047 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 54, 59 |
| Conread position: | 150-566 |
| Cow position: | chr19:14940156-14940572 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 306, 316 |
| Conread position: | 150-566 |
| Cow position: | chr19:14940492-14940908 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 227, 235 |
| Conread position: | 150-566 |
| Cow position: | chr19:23649722-23650138 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-566 |
| Cow position: | chr19:23650058-23650474 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-575 |
| Cow position: | chr19:14940324-14940749 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-578 |
| Cow position: | chr19:23649974-23650402 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 267 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 136, 148 |
| Conread position: | 150-584 |
| Cow position: | chr19:14940660-14941094 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 54, 67 |
| Conread position: | 153-566 |
| Cow position: | chr19:23649389-23649802 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 64 |
| Conread position: | 165-575 |
| Cow position: | chr19:23597044-23597454 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 263 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 292, 298 |
| Conread position: | 175-559 |
| Cow position: | chr19:14940433-14940817 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 281, 291 |
| Conread position: | 212-482 |
| Cow position: | chr19:17615160-17615430 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 215-558 |
| Cow position: | chr19:14940137-14940480 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 244, 251 |
| Conread position: | 217-559 |
| Cow position: | chr19:14960158-14959816 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 228-575 |
| Cow position: | chr19:20635555-20635208 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 154, 134 |
| Conread position: | 233-575 |
| Cow position: | chr19:23649301-23649641 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 68, 64 |
| Conread position: | 234-575 |
| Cow position: | chr19:14939988-14940329 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 150, 140 |
| Conread position: | 242-617 |
| Cow position: | chr19:17615106-17615478 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 75 |
| Conread position: | 279-530 |
| Cow position: | chr19:14959119-14958868 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 317-575 |
| Cow position: | chr19:14939987-14940245 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.