Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8033N04.3 |
| Conread position: | 148-454 |
| Cow position: | chr22:12458528-12458222 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-527 |
| Cow position: | chr22:12458444-12458065 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 307, 290 |
| Conread position: | 148-572 |
| Cow position: | chr22:12499034-12499458 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 311, 318 |
| Conread position: | 148-574 |
| Cow position: | chr22:12476225-12475799 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 311, 318 |
| Conread position: | 150-501 |
| Cow position: | chr22:14467973-14468324 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-527 |
| Cow position: | chr22:14468057-14468434 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 235, 210 |
| Conread position: | 150-544 |
| Cow position: | chr22:12499120-12499514 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 297, 316 |
| Conread position: | 150-566 |
| Cow position: | chr22:12431658-12431242 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-574 |
| Cow position: | chr22:11640772-11641196 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-574 |
| Cow position: | chr22:12431574-12431150 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-575 |
| Cow position: | chr22:11640856-11641281 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-575 |
| Cow position: | chr22:12418861-12418436 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 269 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-578 |
| Cow position: | chr22:11666445-11666873 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 151, 142 |
| Conread position: | 150-578 |
| Cow position: | chr22:11701183-11701611 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 62, 67 |
| Conread position: | 150-578 |
| Cow position: | chr22:12399258-12398830 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 324, 294 |
| Conread position: | 150-578 |
| Cow position: | chr22:12418945-12418517 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-574 |
| Cow position: | chr22:12431739-12431318 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 154-575 |
| Cow position: | chr22:11640692-11641113 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-578 |
| Cow position: | chr22:11701276-11701695 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 274 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 288, 300 |
| Conread position: | 161-578 |
| Cow position: | chr22:12419018-12418601 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 162-566 |
| Cow position: | chr22:12458598-12458194 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 294, 307 |
| Conread position: | 168-526 |
| Cow position: | chr22:11640622-11640980 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 186-544 |
| Cow position: | chr22:12476103-12475745 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 261, 280 |
| Conread position: | 223-527 |
| Cow position: | chr22:12431753-12431449 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 140, 153 |
| Conread position: | 226-566 |
| Cow position: | chr22:12475895-12475555 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 226-575 |
| Cow position: | chr22:12499364-12499713 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 228-559 |
| Cow position: | chr22:12458112-12457781 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 219, 226 |
| Conread position: | 233-578 |
| Cow position: | chr22:11701098-11701443 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 172, 179 |
| Conread position: | 238-443 |
| Cow position: | chr22:12419294-12419089 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 243-575 |
| Cow position: | chr22:12399837-12399505 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 252-575 |
| Cow position: | chr22:11640622-11640945 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 252-578 |
| Cow position: | chr22:12476373-12476047 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 258-574 |
| Cow position: | chr22:12419005-12418689 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.