Cow genome map

Conread name: Ss1.1-Pig4-TMW8033N04.3

Conread position: 118-441
Cow position:
Alignm length: 332
Alignm identity: 218
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 103

Conread position: 128-538
Cow position:
Alignm length: 415
Alignm identity: 272
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 81, 30

Conread position: 130-493
Cow position:
Alignm length: 365
Alignm identity: 239
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 6, 20

Conread position: 135-578
Cow position:
Alignm length: 445
Alignm identity: 276
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 324, 11

Conread position: 143-569
Cow position:
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 46

Conread position: 143-587
Cow position:
Alignm length: 448
Alignm identity: 267
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 155, 139

Conread position: 144-578
Cow position:
Alignm length: 438
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 42

Conread position: 146-575
Cow position:
Alignm length: 430
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 148-353
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 41

Conread position: 148-403
Cow position:
Alignm length: 258
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 166, 157

Conread position: 148-491
Cow position:
Alignm length: 345
Alignm identity: 230
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 146, 153

Conread position: 148-496
Cow position:
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 42

Conread position: 148-497
Cow position:
Alignm length: 352
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 109

Conread position: 148-498
Cow position:
Alignm length: 353
Alignm identity: 213
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 56, 63

Conread position: 148-521
Cow position:
Alignm length: 376
Alignm identity: 226
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 67

Conread position: 148-527
Cow position:
Alignm length: 380
Alignm identity: 238
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 148-527
Cow position:
Alignm length: 382
Alignm identity: 231
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 152, 139

Conread position: 148-546
Cow position:
Alignm length: 399
Alignm identity: 237
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 148-546
Cow position:
Alignm length: 401
Alignm identity: 240
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 69

Conread position: 148-552
Cow position:
Alignm length: 405
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 148-557
Cow position:
Alignm length: 411
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 308

Conread position: 148-568
Cow position:
Alignm length: 424
Alignm identity: 261
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 56, 67

Conread position: 148-575
Cow position:
Alignm length: 430
Alignm identity: 264
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 55

Conread position: 148-575
Cow position:
Alignm length: 430
Alignm identity: 262
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 229, 237

Conread position: 148-578
Cow position:
Alignm length: 432
Alignm identity: 271
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 297, 306

Conread position: 148-578
Cow position:
Alignm length: 432
Alignm identity: 267
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 307, 318

Conread position: 148-578
Cow position:
Alignm length: 432
Alignm identity: 250
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 308, 315

Conread position: 148-585
Cow position:
Alignm length: 439
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 303

Conread position: 149-483
Cow position:
Alignm length: 337
Alignm identity: 209
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 68, 35

Conread position: 150-360
Cow position:
Alignm length: 213
Alignm identity: 143
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 169, 174

Conread position: 150-411
Cow position:
Alignm length: 265
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 110, 36

Conread position: 150-420
Cow position:
Alignm length: 271
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 150-442
Cow position:
Alignm length: 293
Alignm identity: 182
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 150-446
Cow position:
Alignm length: 297
Alignm identity: 202
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 150-476
Cow position:
Alignm length: 328
Alignm identity: 214
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 39

Conread position: 150-486
Cow position:
Alignm length: 339
Alignm identity: 229
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 55, 67

Conread position: 150-497
Cow position:
Alignm length: 348
Alignm identity: 213
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 150-499
Cow position:
Alignm length: 351
Alignm identity: 234
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 306, 316

Conread position: 150-527
Cow position:
Alignm length: 379
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 342

Conread position: 150-538
Cow position:
Alignm length: 390
Alignm identity: 242
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 306, 311

Conread position: 150-544
Cow position:
Alignm length: 399
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 51

Conread position: 150-546
Cow position:
Alignm length: 398
Alignm identity: 259
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 295, 184

Conread position: 150-555
Cow position:
Alignm length: 406
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 150-555
Cow position:
Alignm length: 406
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 150-557
Cow position:
Alignm length: 409
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 301

Conread position: 150-558
Cow position:
Alignm length: 410
Alignm identity: 250
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 351, 342

Conread position: 150-558
Cow position:
Alignm length: 409
Alignm identity: 249
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 150-559
Cow position:
Alignm length: 411
Alignm identity: 256
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 306, 316

Conread position: 150-560
Cow position:
Alignm length: 414
Alignm identity: 251
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 181, 154

Conread position: 150-566
Cow position:
Alignm length: 418
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 39

Conread position: 150-566
Cow position:
Alignm length: 420
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 39

Conread position: 150-566
Cow position:
Alignm length: 418
Alignm identity: 259
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 308, 316

Conread position: 150-566
Cow position:
Alignm length: 417
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 150-566
Cow position:
Alignm length: 417
Alignm identity: 262
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 130, 0

Conread position: 150-568
Cow position:
Alignm length: 420
Alignm identity: 248
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 247, 243

Conread position: 150-573
Cow position:
Alignm length: 426
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 40

Conread position: 150-573
Cow position:
Alignm length: 424
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 150-575
Cow position:
Alignm length: 426
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 150-575
Cow position:
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 39

Conread position: 150-575
Cow position:
Alignm length: 426
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 150-575
Cow position:
Alignm length: 427
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 60

Conread position: 150-575
Cow position:
Alignm length: 428
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 34

Conread position: 150-575
Cow position:
Alignm length: 427
Alignm identity: 268
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 223, 211

Conread position: 150-575
Cow position:
Alignm length: 428
Alignm identity: 270
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 54, 61

Conread position: 150-578
Cow position:
Alignm length: 431
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 39

Conread position: 150-578
Cow position:
Alignm length: 431
Alignm identity: 266
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 217, 130

Conread position: 150-578
Cow position:
Alignm length: 430
Alignm identity: 263
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 358, 213

Conread position: 150-578
Cow position:
Alignm length: 430
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 135

Conread position: 150-578
Cow position:
Alignm length: 433
Alignm identity: 260
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 8

Conread position: 150-578
Cow position:
Alignm length: 429
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 150-578
Cow position:
Alignm length: 429
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 150-578
Cow position:
Alignm length: 429
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 150-578
Cow position:
Alignm length: 430
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 54

Conread position: 150-578
Cow position:
Alignm length: 429
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 150-578
Cow position:
Alignm length: 430
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 49

Conread position: 150-578
Cow position:
Alignm length: 431
Alignm identity: 259
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 70

Conread position: 150-578
Cow position:
Alignm length: 430
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 152

Conread position: 150-578
Cow position:
Alignm length: 429
Alignm identity: 264
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 214, 0

Conread position: 150-578
Cow position:
Alignm length: 429
Alignm identity: 267
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 125, 0

Conread position: 151-553
Cow position:
Alignm length: 404
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 62

Conread position: 152-578
Cow position:
Alignm length: 427
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 153-521
Cow position:
Alignm length: 369
Alignm identity: 229
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 153-538
Cow position:
Alignm length: 386
Alignm identity: 228
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 345, 0

Conread position: 153-555
Cow position:
Alignm length: 403
Alignm identity: 250
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 153-565
Cow position:
Alignm length: 413
Alignm identity: 256
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 153-566
Cow position:
Alignm length: 414
Alignm identity: 262
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 153-566
Cow position:
Alignm length: 416
Alignm identity: 256
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 212, 208

Conread position: 153-578
Cow position:
Alignm length: 427
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 47

Conread position: 155-436
Cow position:
Alignm length: 282
Alignm identity: 180
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 155-557
Cow position:
Alignm length: 404
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 137

Conread position: 155-558
Cow position:
Alignm length: 406
Alignm identity: 249
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 140, 145

Conread position: 155-578
Cow position:
Alignm length: 424
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 0

Conread position: 156-556
Cow position:
Alignm length: 401
Alignm identity: 258
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 387, 0

Conread position: 156-565
Cow position:
Alignm length: 410
Alignm identity: 260
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 158-525
Cow position:
Alignm length: 374
Alignm identity: 246
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 54, 38

Conread position: 158-558
Cow position:
Alignm length: 401
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 0

Conread position: 158-575
Cow position:
Alignm length: 418
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 159-578
Cow position:
Alignm length: 421
Alignm identity: 268
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 114, 108

Conread position: 167-566
Cow position:
Alignm length: 402
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 66

Conread position: 168-557
Cow position:
Alignm length: 390
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 168-578
Cow position:
Alignm length: 411
Alignm identity: 259
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 170-555
Cow position:
Alignm length: 392
Alignm identity: 250
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 41, 29

Conread position: 186-559
Cow position:
Alignm length: 378
Alignm identity: 233
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 25

Conread position: 188-566
Cow position:
Alignm length: 381
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 25

Conread position: 188-575
Cow position:
Alignm length: 389
Alignm identity: 237
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 151, 158

Conread position: 188-578
Cow position:
Alignm length: 393
Alignm identity: 244
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 85, 80

Conread position: 215-403
Cow position:
Alignm length: 190
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 175, 0

Conread position: 216-487
Cow position:
Alignm length: 273
Alignm identity: 170
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 267, 0

Conread position: 219-578
Cow position:
Alignm length: 360
Alignm identity: 233
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 226-498
Cow position:
Alignm length: 274
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 74

Conread position: 226-569
Cow position:
Alignm length: 344
Alignm identity: 222
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 226-574
Cow position:
Alignm length: 349
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 227-566
Cow position:
Alignm length: 344
Alignm identity: 222
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 112, 123

Conread position: 228-498
Cow position:
Alignm length: 272
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 73, 66

Conread position: 230-575
Cow position:
Alignm length: 346
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 230-579
Cow position:
Alignm length: 352
Alignm identity: 214
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 147, 133

Conread position: 233-578
Cow position:
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 234-575
Cow position:
Alignm length: 345
Alignm identity: 216
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 53

Conread position: 237-578
Cow position:
Alignm length: 345
Alignm identity: 216
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 125, 133

Conread position: 239-544
Cow position:
Alignm length: 306
Alignm identity: 197
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 8, 0

Conread position: 239-559
Cow position:
Alignm length: 321
Alignm identity: 207
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 240-486
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 126, 121

Conread position: 240-578
Cow position:
Alignm length: 340
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 216, 229

Conread position: 242-528
Cow position:
Alignm length: 290
Alignm identity: 190
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 38

Conread position: 242-578
Cow position:
Alignm length: 338
Alignm identity: 223
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 203, 209

Conread position: 247-588
Cow position:
Alignm length: 344
Alignm identity: 230
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 207, 199

Conread position: 250-575
Cow position:
Alignm length: 326
Alignm identity: 215
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 251-575
Cow position:
Alignm length: 325
Alignm identity: 197
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 252-592
Cow position:
Alignm length: 342
Alignm identity: 216
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 328, 166

Conread position: 257-578
Cow position:
Alignm length: 327
Alignm identity: 202
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 69

Conread position: 258-574
Cow position:
Alignm length: 320
Alignm identity: 198
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 272-575
Cow position:
Alignm length: 305
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 33, 19

Conread position: 272-578
Cow position:
Alignm length: 308
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 93

Conread position: 288-575
Cow position:
Alignm length: 289
Alignm identity: 180
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 157, 166

Conread position: 290-557
Cow position:
Alignm length: 269
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 155, 161

Conread position: 300-596
Cow position:
Alignm length: 297
Alignm identity: 189
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 278, 0

Conread position: 312-575
Cow position:
Alignm length: 266
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 20

Conread position: 314-575
Cow position:
Alignm length: 262
Alignm identity: 167
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 316-578
Cow position:
Alignm length: 263
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 316-578
Cow position:
Alignm length: 264
Alignm identity: 188
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 69, 62

Conread position: 392-578
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 62

Show alignments to all cow chromosomes.