Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8033N04.3 |
| Conread position: | 118-441 |
| Cow position: | chr25:22941333-22941005 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 27, 103 |
| Conread position: | 128-538 |
| Cow position: | chr25:24385439-24385031 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 272 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 81, 30 |
| Conread position: | 130-493 |
| Cow position: | chr25:34734031-34733669 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 239 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 6, 20 |
| Conread position: | 135-578 |
| Cow position: | chr25:33144833-33145271 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 324, 11 |
| Conread position: | 143-569 |
| Cow position: | chr25:3675982-3676408 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 46 |
| Conread position: | 143-587 |
| Cow position: | chr25:23420373-23420818 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 267 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 155, 139 |
| Conread position: | 144-578 |
| Cow position: | chr25:36844629-36844204 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 42 |
| Conread position: | 146-575 |
| Cow position: | chr25:3675902-3676330 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 148-353 |
| Cow position: | chr25:33506911-33507116 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 41 |
| Conread position: | 148-403 |
| Cow position: | chr25:3636231-3635976 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 166, 157 |
| Conread position: | 148-491 |
| Cow position: | chr25:33127881-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 146, 153 |
| Conread position: | 148-496 |
| Cow position: | chr25:4657386-4657038 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 42 |
| Conread position: | 148-497 |
| Cow position: | chr25:34473754-34474100 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 109 |
| Conread position: | 148-498 |
| Cow position: | chr25:34769625-34769275 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 56, 63 |
| Conread position: | 148-521 |
| Cow position: | chr25:36800962-36801335 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 56, 67 |
| Conread position: | 148-527 |
| Cow position: | chr25:33298726-33299105 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-527 |
| Cow position: | chr25:36800878-36801257 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 152, 139 |
| Conread position: | 148-546 |
| Cow position: | chr25:33299230-33299628 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-546 |
| Cow position: | chr25:33299314-33299712 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 69 |
| Conread position: | 148-552 |
| Cow position: | chr25:22940353-22939949 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-557 |
| Cow position: | chr25:25652519-25652928 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 308 |
| Conread position: | 148-568 |
| Cow position: | chr25:33298894-33299314 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 261 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 56, 67 |
| Conread position: | 148-575 |
| Cow position: | chr25:33298642-33299067 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 61, 55 |
| Conread position: | 148-575 |
| Cow position: | chr25:33299146-33299573 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 262 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 229, 237 |
| Conread position: | 148-578 |
| Cow position: | chr25:33298810-33299240 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 271 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 297, 306 |
| Conread position: | 148-578 |
| Cow position: | chr25:34770045-34769615 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 307, 318 |
| Conread position: | 148-578 |
| Cow position: | chr25:36800710-36801140 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 308, 315 |
| Conread position: | 148-585 |
| Cow position: | chr25:33530392-33530829 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 303 |
| Conread position: | 149-483 |
| Cow position: | chr25:34763410-34763741 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 68, 35 |
| Conread position: | 150-360 |
| Cow position: | chr25:24384915-24384705 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 169, 174 |
| Conread position: | 150-411 |
| Cow position: | chr25:23267254-23266993 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 110, 36 |
| Conread position: | 150-420 |
| Cow position: | chr25:33127967-33128237 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-442 |
| Cow position: | chr25:34732527-34732235 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-446 |
| Cow position: | chr25:33506829-33507125 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-476 |
| Cow position: | chr25:33529179-33529505 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 34, 39 |
| Conread position: | 150-486 |
| Cow position: | chr25:3664264-3664600 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 55, 67 |
| Conread position: | 150-497 |
| Cow position: | chr25:34732611-34732264 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-499 |
| Cow position: | chr25:33157140-33156791 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 306, 316 |
| Conread position: | 150-527 |
| Cow position: | chr25:24385083-24384706 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 342 |
| Conread position: | 150-538 |
| Cow position: | chr25:34769791-34769403 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 306, 311 |
| Conread position: | 150-544 |
| Cow position: | chr25:24385251-24384857 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 51 |
| Conread position: | 150-546 |
| Cow position: | chr25:36844539-36844156 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 295, 184 |
| Conread position: | 150-555 |
| Cow position: | chr25:3636481-3636076 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-555 |
| Cow position: | chr25:24385167-24384762 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-557 |
| Cow position: | chr25:33530310-33530717 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 301 |
| Conread position: | 150-558 |
| Cow position: | chr25:34447187-34447595 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 250 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 351, 342 |
| Conread position: | 150-558 |
| Cow position: | chr25:34769707-34769299 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-559 |
| Cow position: | chr25:34769875-34769466 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 306, 316 |
| Conread position: | 150-560 |
| Cow position: | chr25:23266941-23266532 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 181, 154 |
| Conread position: | 150-566 |
| Cow position: | chr25:3664096-3664512 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 150-566 |
| Cow position: | chr25:3664180-3664596 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 39 |
| Conread position: | 150-566 |
| Cow position: | chr25:22235910-22236326 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 308, 316 |
| Conread position: | 150-566 |
| Cow position: | chr25:25652941-25653357 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-566 |
| Cow position: | chr25:34763327-34763740 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 262 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 150-568 |
| Cow position: | chr25:36800544-36800962 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 247, 243 |
| Conread position: | 150-573 |
| Cow position: | chr25:3636397-3635974 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 40 |
| Conread position: | 150-573 |
| Cow position: | chr25:3663928-3664351 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-575 |
| Cow position: | chr25:25652437-25652862 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-575 |
| Cow position: | chr25:25652605-25653030 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 39 |
| Conread position: | 150-575 |
| Cow position: | chr25:33127799-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-575 |
| Cow position: | chr25:33157308-33156883 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 60 |
| Conread position: | 150-575 |
| Cow position: | chr25:33530226-33530651 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 34 |
| Conread position: | 150-575 |
| Cow position: | chr25:34763243-34763665 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 223, 211 |
| Conread position: | 150-575 |
| Cow position: | chr25:34769959-34769534 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 150-578 |
| Cow position: | chr25:3664012-3664440 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 39 |
| Conread position: | 150-578 |
| Cow position: | chr25:23267415-23266994 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 217, 130 |
| Conread position: | 150-578 |
| Cow position: | chr25:23267499-23267078 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 358, 213 |
| Conread position: | 150-578 |
| Cow position: | chr25:24385335-24384907 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 135 |
| Conread position: | 150-578 |
| Cow position: | chr25:24398990-24398565 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 150-578 |
| Cow position: | chr25:25652269-25652697 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-578 |
| Cow position: | chr25:25652353-25652781 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-578 |
| Cow position: | chr25:25652689-25653117 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-578 |
| Cow position: | chr25:25652773-25653201 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 54 |
| Conread position: | 150-578 |
| Cow position: | chr25:33157392-33156964 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-578 |
| Cow position: | chr25:33157476-33157048 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 150-578 |
| Cow position: | chr25:33299064-33299492 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 70 |
| Conread position: | 150-578 |
| Cow position: | chr25:33530142-33530570 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 152 |
| Conread position: | 150-578 |
| Cow position: | chr25:34762910-34763335 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 214, 0 |
| Conread position: | 150-578 |
| Cow position: | chr25:34762994-34763419 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 267 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 151-553 |
| Cow position: | chr25:25652858-25653260 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 62 |
| Conread position: | 152-578 |
| Cow position: | chr25:25652187-25652613 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-521 |
| Cow position: | chr25:36800799-36801167 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-538 |
| Cow position: | chr25:34447358-34447741 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 345, 0 |
| Conread position: | 153-555 |
| Cow position: | chr25:34447274-34447676 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-565 |
| Cow position: | chr25:34447022-34447434 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-566 |
| Cow position: | chr25:34447106-34447519 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 262 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 153-566 |
| Cow position: | chr25:36801543-36801956 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 212, 208 |
| Conread position: | 153-578 |
| Cow position: | chr25:34473591-34474013 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 47 |
| Conread position: | 155-436 |
| Cow position: | chr25:326500-326780 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 155-557 |
| Cow position: | chr25:4657463-4657061 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 137 |
| Conread position: | 155-558 |
| Cow position: | chr25:33298565-33298968 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 140, 145 |
| Conread position: | 155-578 |
| Cow position: | chr25:34473509-34473929 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 0 |
| Conread position: | 156-556 |
| Cow position: | chr25:33529101-33529498 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 258 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 387, 0 |
| Conread position: | 156-565 |
| Cow position: | chr25:34770121-34769712 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 260 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 158-525 |
| Cow position: | chr25:22941372-22941005 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 54, 38 |
| Conread position: | 158-558 |
| Cow position: | chr25:34473680-34474077 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 158-575 |
| Cow position: | chr25:3636557-3636140 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-578 |
| Cow position: | chr25:34763168-34763584 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 268 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 114, 108 |
| Conread position: | 167-566 |
| Cow position: | chr25:33529028-33529427 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 66 |
| Conread position: | 168-557 |
| Cow position: | chr25:33506763-33507152 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 168-578 |
| Cow position: | chr25:33530076-33530486 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 259 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 170-555 |
| Cow position: | chr25:24398807-24398420 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 41, 29 |
| Conread position: | 186-559 |
| Cow position: | chr25:23420332-23420705 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 188-566 |
| Cow position: | chr25:33127669-33128047 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 188-575 |
| Cow position: | chr25:34446889-34447276 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 151, 158 |
| Conread position: | 188-578 |
| Cow position: | chr25:34762864-34763251 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 85, 80 |
| Conread position: | 215-403 |
| Cow position: | chr25:427391-427580 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 216-487 |
| Cow position: | chr25:427308-427580 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 267, 0 |
| Conread position: | 219-578 |
| Cow position: | chr25:4657483-4657124 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 226-498 |
| Cow position: | chr25:22235902-22236174 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 68, 74 |
| Conread position: | 226-569 |
| Cow position: | chr25:34447011-34447354 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 226-574 |
| Cow position: | chr25:33127791-33128139 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 227-566 |
| Cow position: | chr25:22940526-22940187 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 112, 123 |
| Conread position: | 228-498 |
| Cow position: | chr25:34763153-34763423 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 73, 66 |
| Conread position: | 230-575 |
| Cow position: | chr25:34734016-34733671 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 230-579 |
| Cow position: | chr25:34732615-34732266 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 147, 133 |
| Conread position: | 233-578 |
| Cow position: | chr25:25652184-25652529 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 234-575 |
| Cow position: | chr25:36801372-36801713 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 62, 53 |
| Conread position: | 237-578 |
| Cow position: | chr25:36801543-36801884 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 125, 133 |
| Conread position: | 239-544 |
| Cow position: | chr25:326500-326804 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 239-559 |
| Cow position: | chr25:33298565-33298885 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 240-486 |
| Cow position: | chr25:24398651-24398405 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 126, 121 |
| Conread position: | 240-578 |
| Cow position: | chr25:34770121-34769783 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 216, 229 |
| Conread position: | 242-528 |
| Cow position: | chr25:22941372-22941086 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 48, 38 |
| Conread position: | 242-578 |
| Cow position: | chr25:3636557-3636221 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 203, 209 |
| Conread position: | 247-588 |
| Cow position: | chr25:24385406-24385064 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 207, 199 |
| Conread position: | 250-575 |
| Cow position: | chr25:33529027-33529352 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 251-575 |
| Cow position: | chr25:22235843-22236167 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 252-592 |
| Cow position: | chr25:24399212-24398883 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 328, 166 |
| Conread position: | 257-578 |
| Cow position: | chr25:33529993-33530318 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 69 |
| Conread position: | 258-574 |
| Cow position: | chr25:3637072-3636753 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 272-575 |
| Cow position: | chr25:33127669-33127972 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 33, 19 |
| Conread position: | 272-578 |
| Cow position: | chr25:33157522-33157216 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 83, 93 |
| Conread position: | 288-575 |
| Cow position: | chr25:36844653-36844366 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 157, 166 |
| Conread position: | 290-557 |
| Cow position: | chr25:33506717-33506984 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 155, 161 |
| Conread position: | 300-596 |
| Cow position: | chr25:427308-427602 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 278, 0 |
| Conread position: | 312-575 |
| Cow position: | chr25:326488-326751 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 13, 20 |
| Conread position: | 314-575 |
| Cow position: | chr25:34732615-34732354 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 316-578 |
| Cow position: | chr25:3663926-3664188 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 316-578 |
| Cow position: | chr25:3675987-3676249 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 69, 62 |
| Conread position: | 392-578 |
| Cow position: | chr25:34734023-34733836 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 62 |
Show alignments to all cow chromosomes.