Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8033N04.3 |
| Conread position: | 131-527 |
| Cow position: | chr4:65350354-65350752 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 129 |
| Conread position: | 140-543 |
| Cow position: | chr4:65146408-65146808 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 32, 10 |
| Conread position: | 146-518 |
| Cow position: | chr4:65261558-65261187 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 54, 6 |
| Conread position: | 149-566 |
| Cow position: | chr4:65350041-65350458 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 49, 66 |
| Conread position: | 150-432 |
| Cow position: | chr4:65703250-65702968 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 102, 83 |
| Conread position: | 150-486 |
| Cow position: | chr4:65703502-65703166 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 35, 40 |
| Conread position: | 150-491 |
| Cow position: | chr4:65494770-65494429 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 40 |
| Conread position: | 150-558 |
| Cow position: | chr4:65121698-65122106 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 268 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 145, 152 |
| Conread position: | 150-565 |
| Cow position: | chr4:65702881-65702466 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 230, 235 |
| Conread position: | 150-566 |
| Cow position: | chr4:65350294-65350707 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 68, 61 |
| Conread position: | 150-566 |
| Cow position: | chr4:65703586-65703170 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 226 |
| Conread position: | 150-574 |
| Cow position: | chr4:65121614-65122038 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 150 |
| Conread position: | 150-575 |
| Cow position: | chr4:65494944-65494513 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 313 |
| Conread position: | 151-575 |
| Cow position: | chr4:65261725-65261298 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 265 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 94, 228 |
| Conread position: | 151-575 |
| Cow position: | chr4:65350211-65350632 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 273 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 43, 51 |
| Conread position: | 153-446 |
| Cow position: | chr4:65261468-65261175 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 125, 138 |
| Conread position: | 153-575 |
| Cow position: | chr4:65349877-65350299 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 256 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 116, 125 |
| Conread position: | 153-575 |
| Cow position: | chr4:65703667-65703245 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 156-566 |
| Cow position: | chr4:65495022-65494606 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 160-402 |
| Cow position: | chr4:65546428-65546187 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 7 |
| Conread position: | 160-404 |
| Cow position: | chr4:65157938-65158182 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 39, 45 |
| Conread position: | 168-575 |
| Cow position: | chr4:65121548-65121955 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 168-586 |
| Cow position: | chr4:65494836-65494421 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 208 |
| Conread position: | 216-575 |
| Cow position: | chr4:65261573-65261214 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 297, 293 |
| Conread position: | 233-569 |
| Cow position: | chr4:65702882-65702546 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 49, 58 |
| Conread position: | 233-575 |
| Cow position: | chr4:65495029-65494681 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 237-571 |
| Cow position: | chr4:65157838-65158181 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 46, 50 |
| Conread position: | 244-486 |
| Cow position: | chr4:65546428-65546187 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 122, 7 |
| Conread position: | 244-488 |
| Cow position: | chr4:65157938-65158182 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 118, 127 |
| Conread position: | 247-578 |
| Cow position: | chr4:65121543-65121874 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 44 |
| Conread position: | 252-481 |
| Cow position: | chr4:65422463-65422698 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 261-446 |
| Cow position: | chr4:65121164-65121349 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 36 |
| Conread position: | 284-572 |
| Cow position: | chr4:65146386-65146671 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 163, 18 |
Show alignments to all cow chromosomes.