Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8033N04.3 |
| Conread position: | 143-578 |
| Cow position: | chr6:49428218-49428653 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 152 |
| Conread position: | 148-443 |
| Cow position: | chr6:49362334-49362629 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 69, 56 |
| Conread position: | 148-559 |
| Cow position: | chr6:49340483-49340894 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 145, 153 |
| Conread position: | 148-574 |
| Cow position: | chr6:49396372-49396798 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 60, 65 |
| Conread position: | 150-420 |
| Cow position: | chr6:49429233-49429503 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 62, 66 |
| Conread position: | 150-493 |
| Cow position: | chr6:49429149-49429492 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 57, 65 |
| Conread position: | 150-537 |
| Cow position: | chr6:49340737-49341124 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 150-538 |
| Cow position: | chr6:49428813-49429201 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 310 |
| Conread position: | 150-547 |
| Cow position: | chr6:49340989-49341386 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 298, 309 |
| Conread position: | 150-559 |
| Cow position: | chr6:49340569-49340978 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 54, 66 |
| Conread position: | 150-559 |
| Cow position: | chr6:49340653-49341062 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 53, 67 |
| Conread position: | 150-566 |
| Cow position: | chr6:49396290-49396706 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 54, 65 |
| Conread position: | 150-566 |
| Cow position: | chr6:49429065-49429481 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 40 |
| Conread position: | 150-575 |
| Cow position: | chr6:49428897-49429322 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 39 |
| Conread position: | 150-575 |
| Cow position: | chr6:49428981-49429406 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-578 |
| Cow position: | chr6:49428309-49428737 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 66 |
| Conread position: | 150-578 |
| Cow position: | chr6:49428393-49428821 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 62 |
| Conread position: | 150-578 |
| Cow position: | chr6:49428477-49428905 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 66 |
| Conread position: | 150-578 |
| Cow position: | chr6:49428561-49428989 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 150-578 |
| Cow position: | chr6:49428729-49429157 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 396, 403 |
| Conread position: | 153-498 |
| Cow position: | chr6:49340404-49340749 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 54, 64 |
| Conread position: | 153-578 |
| Cow position: | chr6:49428648-49429073 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 155-566 |
| Cow position: | chr6:49396547-49396958 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 53, 62 |
| Conread position: | 188-578 |
| Cow position: | chr6:49396166-49396550 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 225-569 |
| Cow position: | chr6:49396281-49396625 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 157, 146 |
Show alignments to all cow chromosomes.