Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8033N04.3 |
| Conread position: | 137-555 |
| Cow position: | chr7:12293250-12293666 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 148-415 |
| Cow position: | chr7:18390493-18390760 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-483 |
| Cow position: | chr7:28846754-28847089 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 137, 130 |
| Conread position: | 148-544 |
| Cow position: | chr7:18390409-18390805 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-553 |
| Cow position: | chr7:18390157-18390562 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 148-578 |
| Cow position: | chr7:18390241-18390671 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-446 |
| Cow position: | chr7:12293681-12293977 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 55, 63 |
| Conread position: | 150-526 |
| Cow position: | chr7:11600938-11600562 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 143, 149 |
| Conread position: | 150-530 |
| Cow position: | chr7:11601022-11600642 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 55, 61 |
| Conread position: | 150-555 |
| Cow position: | chr7:12293429-12293834 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 65 |
| Conread position: | 150-555 |
| Cow position: | chr7:12293513-12293918 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-555 |
| Cow position: | chr7:28846504-28846909 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 263 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 55, 63 |
| Conread position: | 150-555 |
| Cow position: | chr7:28846588-28846993 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 58, 54 |
| Conread position: | 150-557 |
| Cow position: | chr7:12293345-12293752 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 54 |
| Conread position: | 150-558 |
| Cow position: | chr7:18390327-18390735 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 261 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 55, 61 |
| Conread position: | 150-559 |
| Cow position: | chr7:42879027-42878618 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 159, 163 |
| Conread position: | 150-566 |
| Cow position: | chr7:28846672-28847088 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 258 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-566 |
| Cow position: | chr7:42878943-42878527 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 152-434 |
| Cow position: | chr7:12293767-12294051 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 255, 0 |
| Conread position: | 156-547 |
| Cow position: | chr7:42879189-42878798 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 289, 298 |
| Conread position: | 158-566 |
| Cow position: | chr7:12293605-12294013 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 55 |
| Conread position: | 163-554 |
| Cow position: | chr7:28846433-28846824 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 42, 48 |
| Conread position: | 237-578 |
| Cow position: | chr7:18390162-18390503 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 65 |
| Conread position: | 251-575 |
| Cow position: | chr7:28846437-28846761 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 181, 190 |
| Conread position: | 326-566 |
| Cow position: | chr7:12293269-12293509 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 134, 130 |
Show alignments to all cow chromosomes.