Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8033O03.5.5
        

               Conread position:
               11-152
               

               Cow position:
               chr8:41420315-41420458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 117
               

               Conread position:
               123-300
               

               Cow position:
               chr8:41420717-41420894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               292-370
               

               Cow position:
               chr8:41421238-41421316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               79
               

               Alignm identity:
               77
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               418-556
               

               Cow position:
               chr8:41421578-41421716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               132
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               595-729
               

               Cow position:
               chr8:41422064-41422198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               125
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               727-872
               

               Cow position:
               chr8:41422472-41422616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               132
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               861-948
               

               Cow position:
               chr8:41422708-41422795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               945-1101
               

               Cow position:
               chr8:41423168-41423324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               148
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1085-1272
               

               Cow position:
               chr8:41423589-41423775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 0
               
Show alignments to all cow chromosomes.