Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8034M07.5 |
| Conread position: | 489-828 |
| Cow position: | chr1:197233-196894 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 28 |
| Conread position: | 500-685 |
| Cow position: | chr1:4027646-4027836 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 500-694 |
| Cow position: | chr1:1877812-1878008 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 500-720 |
| Cow position: | chr1:41004582-41004358 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 50, 17 |
| Conread position: | 500-781 |
| Cow position: | chr1:54199598-54199316 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 110, 17 |
| Conread position: | 500-789 |
| Cow position: | chr1:88618378-88618667 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 500-792 |
| Cow position: | chr1:49433480-49433190 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 500-797 |
| Cow position: | chr1:55705469-55705170 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 500-799 |
| Cow position: | chr1:55146586-55146879 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 7, 15 |
| Conread position: | 500-799 |
| Cow position: | chr1:62964064-62964347 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 500-861 |
| Cow position: | chr1:68845701-68845346 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 500-883 |
| Cow position: | chr1:93528475-93528877 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 501-690 |
| Cow position: | chr1:85867380-85867573 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 505-737 |
| Cow position: | chr1:99637989-99637761 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 102, 15 |
| Conread position: | 505-791 |
| Cow position: | chr1:11226455-11226173 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 103, 17 |
| Conread position: | 505-792 |
| Cow position: | chr1:37707178-37706903 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 97, 12 |
| Conread position: | 505-793 |
| Cow position: | chr1:73584611-73584335 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 127, 9 |
| Conread position: | 505-799 |
| Cow position: | chr1:89937570-89937287 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 12 |
| Conread position: | 505-808 |
| Cow position: | chr1:95176726-95177028 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 183, 12 |
| Conread position: | 505-809 |
| Cow position: | chr1:56634889-56635189 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 143, 12 |
| Conread position: | 505-809 |
| Cow position: | chr1:72304580-72304297 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 505-861 |
| Cow position: | chr1:71045545-71045895 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 127, 12 |
| Conread position: | 506-626 |
| Cow position: | chr1:53650681-53650800 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 11 |
| Conread position: | 506-627 |
| Cow position: | chr1:86484747-86484867 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 506-648 |
| Cow position: | chr1:99118177-99118317 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 506-690 |
| Cow position: | chr1:71748215-71748036 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 104, 14 |
| Conread position: | 506-691 |
| Cow position: | chr1:85361647-85361835 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 506-691 |
| Cow position: | chr1:95215394-95215206 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 111, 11 |
| Conread position: | 506-694 |
| Cow position: | chr1:51628710-51628519 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 506-696 |
| Cow position: | chr1:71952879-71953058 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 182, 11 |
| Conread position: | 506-697 |
| Cow position: | chr1:79663874-79663688 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 506-699 |
| Cow position: | chr1:49839299-49839490 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 123, 9 |
| Conread position: | 506-706 |
| Cow position: | chr1:14379738-14379544 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 506-714 |
| Cow position: | chr1:79590892-79591103 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 506-720 |
| Cow position: | chr1:33719905-33720120 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 506-730 |
| Cow position: | chr1:95056847-95057066 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 123, 11 |
| Conread position: | 506-733 |
| Cow position: | chr1:94404008-94404229 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 123, 11 |
| Conread position: | 506-736 |
| Cow position: | chr1:3340729-3340956 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 183, 15 |
| Conread position: | 506-737 |
| Cow position: | chr1:56748381-56748620 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 103, 11 |
| Conread position: | 506-738 |
| Cow position: | chr1:55163714-55163939 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 190, 11 |
| Conread position: | 506-739 |
| Cow position: | chr1:3244642-3244871 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 133, 15 |
| Conread position: | 506-739 |
| Cow position: | chr1:57900949-57900720 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 135, 9 |
| Conread position: | 506-740 |
| Cow position: | chr1:71818670-71818440 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 123, 11 |
| Conread position: | 506-741 |
| Cow position: | chr1:47008822-47009056 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 123, 11 |
| Conread position: | 506-762 |
| Cow position: | chr1:43380237-43379980 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 506-762 |
| Cow position: | chr1:99136639-99136386 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 126, 11 |
| Conread position: | 506-765 |
| Cow position: | chr1:98562952-98563209 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 123, 11 |
| Conread position: | 506-771 |
| Cow position: | chr1:41696846-41697111 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 506-786 |
| Cow position: | chr1:1991633-1991350 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 506-788 |
| Cow position: | chr1:31348649-31348367 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 506-788 |
| Cow position: | chr1:42874155-42873880 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 185, 11 |
| Conread position: | 506-788 |
| Cow position: | chr1:86482695-86482974 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 506-788 |
| Cow position: | chr1:96964112-96964386 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 109, 11 |
| Conread position: | 506-789 |
| Cow position: | chr1:95035564-95035281 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 506-790 |
| Cow position: | chr1:82884598-82884320 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 122, 11 |
| Conread position: | 506-792 |
| Cow position: | chr1:20204818-20205101 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 103, 11 |
| Conread position: | 506-792 |
| Cow position: | chr1:52039428-52039710 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 11 |
| Conread position: | 506-792 |
| Cow position: | chr1:55135625-55135910 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 506-792 |
| Cow position: | chr1:85162756-85162473 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 182, 11 |
| Conread position: | 506-792 |
| Cow position: | chr1:98551505-98551794 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 14 |
| Conread position: | 506-793 |
| Cow position: | chr1:42968526-42968244 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 506-793 |
| Cow position: | chr1:51981019-51981297 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 506-793 |
| Cow position: | chr1:52753374-52753085 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 152, 11 |
| Conread position: | 506-793 |
| Cow position: | chr1:80988138-80988422 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 506-793 |
| Cow position: | chr1:81228548-81228258 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 108, 11 |
| Conread position: | 506-793 |
| Cow position: | chr1:90864508-90864218 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 506-793 |
| Cow position: | chr1:91816982-91816696 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 104, 14 |
| Conread position: | 506-793 |
| Cow position: | chr1:92437199-92436915 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 106, 11 |
| Conread position: | 506-794 |
| Cow position: | chr1:61175975-61176254 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 506-794 |
| Cow position: | chr1:81355912-81355627 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 124, 11 |
| Conread position: | 506-796 |
| Cow position: | chr1:99614239-99614524 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 137, 11 |
| Conread position: | 506-797 |
| Cow position: | chr1:47233683-47233399 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 142, 9 |
| Conread position: | 506-799 |
| Cow position: | chr1:81613177-81613470 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 506-800 |
| Cow position: | chr1:1981318-1981031 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 127, 11 |
| Conread position: | 506-800 |
| Cow position: | chr1:53308601-53308310 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 73, 11 |
| Conread position: | 506-800 |
| Cow position: | chr1:74822243-74822529 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 506-808 |
| Cow position: | chr1:20384829-20384533 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 143, 11 |
| Conread position: | 506-809 |
| Cow position: | chr1:3924002-3923709 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 129, 9 |
| Conread position: | 506-809 |
| Cow position: | chr1:22728839-22729147 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 131, 11 |
| Conread position: | 506-809 |
| Cow position: | chr1:29935590-29935296 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 190, 11 |
| Conread position: | 506-809 |
| Cow position: | chr1:48105642-48105345 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 506-809 |
| Cow position: | chr1:62291894-62291610 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 131, 11 |
| Conread position: | 506-809 |
| Cow position: | chr1:68854966-68855256 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 178, 11 |
| Conread position: | 506-809 |
| Cow position: | chr1:71253763-71253465 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 506-809 |
| Cow position: | chr1:81563525-81563836 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 506-809 |
| Cow position: | chr1:93043817-93044108 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 506-809 |
| Cow position: | chr1:95499704-95499405 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 506-809 |
| Cow position: | chr1:98461082-98461377 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 506-811 |
| Cow position: | chr1:89076844-89076540 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 110, 11 |
| Conread position: | 506-822 |
| Cow position: | chr1:49795796-49796096 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 506-822 |
| Cow position: | chr1:98030706-98031027 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 126, 11 |
| Conread position: | 506-827 |
| Cow position: | chr1:53397779-53398085 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 308, 11 |
| Conread position: | 506-840 |
| Cow position: | chr1:44769320-44768987 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 132, 11 |
| Conread position: | 506-850 |
| Cow position: | chr1:102784752-102785094 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 245 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 293, 11 |
| Conread position: | 506-865 |
| Cow position: | chr1:1956536-1956170 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 283, 11 |
| Conread position: | 506-878 |
| Cow position: | chr1:64678489-64678853 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 251 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 352, 11 |
| Conread position: | 506-879 |
| Cow position: | chr1:74956232-74955856 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 255 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 506-881 |
| Cow position: | chr1:19482281-19481919 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 253 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 126, 11 |
| Conread position: | 506-883 |
| Cow position: | chr1:37322213-37321827 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 506-883 |
| Cow position: | chr1:61884707-61885095 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 287, 15 |
| Conread position: | 507-865 |
| Cow position: | chr1:101634494-101634863 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 122, 10 |
| Conread position: | 508-747 |
| Cow position: | chr1:80869900-80870144 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 76, 9 |
| Conread position: | 508-865 |
| Cow position: | chr1:71295521-71295135 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 275 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 82, 9 |
| Conread position: | 509-741 |
| Cow position: | chr1:6077689-6077923 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 121, 8 |
| Conread position: | 509-770 |
| Cow position: | chr1:98372423-98372684 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 98, 8 |
| Conread position: | 509-792 |
| Cow position: | chr1:45555155-45555440 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 11, 80 |
| Conread position: | 509-883 |
| Cow position: | chr1:71079162-71078779 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 274 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 120, 12 |
| Conread position: | 512-787 |
| Cow position: | chr1:54258362-54258636 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 8, 52 |
| Conread position: | 513-718 |
| Cow position: | chr1:82861570-82861781 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 175 |
| Conread position: | 513-737 |
| Cow position: | chr1:71946575-71946351 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 8, 40 |
| Conread position: | 513-792 |
| Cow position: | chr1:42887466-42887203 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 129, 63 |
| Conread position: | 513-804 |
| Cow position: | chr1:41252607-41252324 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 99 |
| Conread position: | 513-809 |
| Cow position: | chr1:78810831-78811129 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 11, 206 |
| Conread position: | 513-865 |
| Cow position: | chr1:22826965-22827310 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 7, 57 |
| Conread position: | 514-788 |
| Cow position: | chr1:45007264-45007536 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 96, 47 |
| Conread position: | 515-702 |
| Cow position: | chr1:3035194-3035005 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 133, 38 |
| Conread position: | 515-705 |
| Cow position: | chr1:69415919-69415724 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 515-733 |
| Cow position: | chr1:12596102-12595886 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 113, 7 |
| Conread position: | 515-738 |
| Cow position: | chr1:95654917-95654693 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 132, 181 |
| Conread position: | 515-792 |
| Cow position: | chr1:13637872-13637589 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 114, 54 |
| Conread position: | 515-792 |
| Cow position: | chr1:89342194-89341906 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 113, 63 |
| Conread position: | 515-792 |
| Cow position: | chr1:100800154-100800427 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 134, 66 |
| Conread position: | 515-793 |
| Cow position: | chr1:26179016-26178736 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 95, 116 |
| Conread position: | 515-793 |
| Cow position: | chr1:46693858-46693579 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 95, 117 |
| Conread position: | 515-809 |
| Cow position: | chr1:62036599-62036893 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 93, 118 |
| Conread position: | 515-809 |
| Cow position: | chr1:84255553-84255858 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 95, 115 |
| Conread position: | 516-713 |
| Cow position: | chr1:43872535-43872333 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 516-739 |
| Cow position: | chr1:61564592-61564819 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 112, 212 |
| Conread position: | 516-792 |
| Cow position: | chr1:39510251-39509984 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 72, 43 |
| Conread position: | 516-792 |
| Cow position: | chr1:61005766-61005489 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 135, 113 |
| Conread position: | 517-690 |
| Cow position: | chr1:92370561-92370385 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 93, 115 |
| Conread position: | 517-788 |
| Cow position: | chr1:68619137-68618861 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 101, 207 |
| Conread position: | 518-643 |
| Cow position: | chr1:99792613-99792738 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 518-647 |
| Cow position: | chr1:30504272-30504397 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 518-704 |
| Cow position: | chr1:100537612-100537799 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 59, 100 |
| Conread position: | 518-720 |
| Cow position: | chr1:46885896-46886094 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 92, 112 |
| Conread position: | 518-720 |
| Cow position: | chr1:76222889-76222686 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 92, 46 |
| Conread position: | 518-729 |
| Cow position: | chr1:53671948-53671726 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 104 |
| Conread position: | 518-730 |
| Cow position: | chr1:55686419-55686185 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 518-733 |
| Cow position: | chr1:92197262-92197470 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 518-737 |
| Cow position: | chr1:19885186-19885402 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 183, 99 |
| Conread position: | 518-737 |
| Cow position: | chr1:50679484-50679260 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 92, 49 |
| Conread position: | 518-738 |
| Cow position: | chr1:81470930-81471153 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 130, 175 |
| Conread position: | 518-740 |
| Cow position: | chr1:18937032-18936812 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 94, 127 |
| Conread position: | 518-740 |
| Cow position: | chr1:53540192-53540413 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 31, 128 |
| Conread position: | 518-741 |
| Cow position: | chr1:88652432-88652654 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 120, 12 |
| Conread position: | 518-761 |
| Cow position: | chr1:68276208-68276459 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 92, 136 |
| Conread position: | 518-769 |
| Cow position: | chr1:60032797-60032548 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 93, 30 |
| Conread position: | 518-772 |
| Cow position: | chr1:90640826-90641090 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 92, 195 |
| Conread position: | 518-780 |
| Cow position: | chr1:24235719-24235457 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 130, 157 |
| Conread position: | 518-780 |
| Cow position: | chr1:61350949-61351207 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 93, 126 |
| Conread position: | 518-782 |
| Cow position: | chr1:42256708-42256438 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 140 |
| Conread position: | 518-787 |
| Cow position: | chr1:42138668-42138927 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 92, 62 |
| Conread position: | 518-787 |
| Cow position: | chr1:98310863-98311141 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 136 |
| Conread position: | 518-788 |
| Cow position: | chr1:634993-635264 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 92, 44 |
| Conread position: | 518-788 |
| Cow position: | chr1:16962212-16961940 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 92, 181 |
| Conread position: | 518-788 |
| Cow position: | chr1:34300746-34300481 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 111, 70 |
| Conread position: | 518-788 |
| Cow position: | chr1:70422102-70422374 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 93, 137 |
| Conread position: | 518-788 |
| Cow position: | chr1:81569233-81568958 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 130, 159 |
| Conread position: | 518-788 |
| Cow position: | chr1:84282866-84283143 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 72, 139 |
| Conread position: | 518-789 |
| Cow position: | chr1:95765287-95765021 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 129, 99 |
| Conread position: | 518-790 |
| Cow position: | chr1:80336445-80336177 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 94, 131 |
| Conread position: | 518-791 |
| Cow position: | chr1:80899909-80900193 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 518-792 |
| Cow position: | chr1:28563767-28563495 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 92, 38 |
| Conread position: | 518-792 |
| Cow position: | chr1:63435008-63434732 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 102, 88 |
| Conread position: | 518-792 |
| Cow position: | chr1:68817997-68817725 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 518-792 |
| Cow position: | chr1:79844270-79844539 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 105, 52 |
| Conread position: | 518-793 |
| Cow position: | chr1:4539637-4539347 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 68, 73 |
| Conread position: | 518-793 |
| Cow position: | chr1:10942290-10942019 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 92, 44 |
| Conread position: | 518-793 |
| Cow position: | chr1:10964096-10964367 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 92, 44 |
| Conread position: | 518-793 |
| Cow position: | chr1:35162205-35162485 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 91, 188 |
| Conread position: | 518-793 |
| Cow position: | chr1:51654212-51654499 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 91, 43 |
| Conread position: | 518-793 |
| Cow position: | chr1:61735637-61735360 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 92, 114 |
| Conread position: | 518-793 |
| Cow position: | chr1:84906266-84905988 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 92, 44 |
| Conread position: | 518-794 |
| Cow position: | chr1:24729038-24728764 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 70, 23 |
| Conread position: | 518-799 |
| Cow position: | chr1:26943113-26943389 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 123, 41 |
| Conread position: | 518-799 |
| Cow position: | chr1:48731027-48730751 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 63, 86 |
| Conread position: | 518-799 |
| Cow position: | chr1:78857521-78857248 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 208 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 130, 37 |
| Conread position: | 518-799 |
| Cow position: | chr1:83583136-83582852 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 128, 94 |
| Conread position: | 518-806 |
| Cow position: | chr1:81913350-81913067 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 178, 108 |
| Conread position: | 518-808 |
| Cow position: | chr1:24542780-24542480 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 110, 45 |
| Conread position: | 518-809 |
| Cow position: | chr1:3167271-3166985 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 518-809 |
| Cow position: | chr1:12464862-12464573 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 110, 51 |
| Conread position: | 518-809 |
| Cow position: | chr1:21787128-21787427 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 518-809 |
| Cow position: | chr1:27145852-27145562 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 111, 180 |
| Conread position: | 518-809 |
| Cow position: | chr1:43389246-43388961 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 130, 34 |
| Conread position: | 518-809 |
| Cow position: | chr1:54207017-54206725 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 117, 30 |
| Conread position: | 518-809 |
| Cow position: | chr1:56225277-56225560 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 120, 47 |
| Conread position: | 518-809 |
| Cow position: | chr1:61742165-61741877 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 115, 34 |
| Conread position: | 518-809 |
| Cow position: | chr1:75744662-75744953 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 210 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 518-810 |
| Cow position: | chr1:1829521-1829235 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 93, 62 |
| Conread position: | 518-818 |
| Cow position: | chr1:79165289-79164984 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 253 |
| Conread position: | 518-822 |
| Cow position: | chr1:5597397-5597106 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 259, 26 |
| Conread position: | 518-840 |
| Cow position: | chr1:44506769-44507097 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 92, 49 |
| Conread position: | 518-864 |
| Cow position: | chr1:34685996-34686334 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 123, 38 |
| Conread position: | 518-879 |
| Cow position: | chr1:43505325-43505700 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 119, 34 |
| Conread position: | 518-879 |
| Cow position: | chr1:70380344-70379990 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 518-879 |
| Cow position: | chr1:82936780-82936428 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 278, 47 |
| Conread position: | 518-883 |
| Cow position: | chr1:4414406-4414046 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 110, 38 |
| Conread position: | 518-883 |
| Cow position: | chr1:26930173-26929811 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 94, 133 |
| Conread position: | 518-883 |
| Cow position: | chr1:43340821-43340450 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 92, 176 |
| Conread position: | 518-883 |
| Cow position: | chr1:70538405-70538789 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 110, 133 |
| Conread position: | 519-626 |
| Cow position: | chr1:98348504-98348397 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 519-706 |
| Cow position: | chr1:32244602-32244411 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 111, 180 |
| Conread position: | 519-738 |
| Cow position: | chr1:64421133-64421351 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 89, 127 |
| Conread position: | 519-788 |
| Cow position: | chr1:63390971-63390697 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 91, 36 |
| Conread position: | 519-792 |
| Cow position: | chr1:91800803-91800526 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 137, 255 |
| Conread position: | 519-793 |
| Cow position: | chr1:6867678-6867390 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 519-793 |
| Cow position: | chr1:72103649-72103925 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 91, 43 |
| Conread position: | 519-809 |
| Cow position: | chr1:93499425-93499712 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 126, 145 |
| Conread position: | 520-701 |
| Cow position: | chr1:67821406-67821227 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 112, 36 |
| Conread position: | 520-741 |
| Cow position: | chr1:69678522-69678304 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 186, 117 |
| Conread position: | 520-742 |
| Cow position: | chr1:61725309-61725090 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 96, 128 |
| Conread position: | 520-788 |
| Cow position: | chr1:64804304-64804032 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 520-790 |
| Cow position: | chr1:31934317-31934579 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 25 |
| Conread position: | 520-792 |
| Cow position: | chr1:52994827-52995098 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 168, 98 |
| Conread position: | 520-793 |
| Cow position: | chr1:31765593-31765298 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 90, 137 |
| Conread position: | 520-797 |
| Cow position: | chr1:4374535-4374258 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 96, 28 |
| Conread position: | 520-809 |
| Cow position: | chr1:66430100-66430382 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 90, 103 |
| Conread position: | 520-831 |
| Cow position: | chr1:64251248-64250933 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 125, 50 |
| Conread position: | 520-878 |
| Cow position: | chr1:89510129-89509753 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 64, 109 |
| Conread position: | 520-880 |
| Cow position: | chr1:54478128-54478493 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 128, 36 |
| Conread position: | 521-646 |
| Cow position: | chr1:51044415-51044540 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 521-708 |
| Cow position: | chr1:95604816-95605006 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 90, 160 |
| Conread position: | 521-709 |
| Cow position: | chr1:52354610-52354421 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 90, 134 |
| Conread position: | 521-712 |
| Cow position: | chr1:59192840-59192641 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 47, 135 |
| Conread position: | 521-714 |
| Cow position: | chr1:50670881-50671079 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 521-739 |
| Cow position: | chr1:29671719-29671500 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 61, 53 |
| Conread position: | 521-742 |
| Cow position: | chr1:58419737-58419960 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 134 |
| Conread position: | 521-761 |
| Cow position: | chr1:45535506-45535750 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 521-778 |
| Cow position: | chr1:71643859-71643603 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 90, 137 |
| Conread position: | 521-787 |
| Cow position: | chr1:57946082-57945805 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 521-787 |
| Cow position: | chr1:80363392-80363127 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 90, 135 |
| Conread position: | 521-788 |
| Cow position: | chr1:97820490-97820755 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 110, 131 |
| Conread position: | 521-790 |
| Cow position: | chr1:4691397-4691660 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 9 |
| Conread position: | 521-790 |
| Cow position: | chr1:21955569-21955301 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 50 |
| Conread position: | 521-795 |
| Cow position: | chr1:89497770-89498030 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 170, 31 |
| Conread position: | 521-796 |
| Cow position: | chr1:51769890-51770171 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 13 |
| Conread position: | 521-799 |
| Cow position: | chr1:6788485-6788202 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 521-808 |
| Cow position: | chr1:100393360-100393073 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 226, 118 |
| Conread position: | 521-809 |
| Cow position: | chr1:84812132-84811848 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 169, 111 |
| Conread position: | 521-809 |
| Cow position: | chr1:101713922-101714208 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 161, 108 |
| Conread position: | 521-818 |
| Cow position: | chr1:1165406-1165696 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 91, 109 |
| Conread position: | 521-840 |
| Cow position: | chr1:95687301-95686973 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 90, 226 |
| Conread position: | 521-858 |
| Cow position: | chr1:65025061-65025423 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 521-883 |
| Cow position: | chr1:92963203-92963560 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 45 |
| Conread position: | 522-761 |
| Cow position: | chr1:82443651-82443411 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 87, 43 |
| Conread position: | 522-786 |
| Cow position: | chr1:96277249-96276984 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 116, 43 |
| Conread position: | 522-792 |
| Cow position: | chr1:25383468-25383742 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 127, 29 |
| Conread position: | 522-809 |
| Cow position: | chr1:7350344-7350639 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 127, 104 |
| Conread position: | 522-809 |
| Cow position: | chr1:82337979-82337689 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 126, 165 |
| Conread position: | 522-865 |
| Cow position: | chr1:73960507-73960857 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 126, 164 |
| Conread position: | 523-695 |
| Cow position: | chr1:52170777-52170601 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 523-709 |
| Cow position: | chr1:90604777-90604586 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 523-788 |
| Cow position: | chr1:10071040-10070772 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 88, 132 |
| Conread position: | 523-809 |
| Cow position: | chr1:41056490-41056769 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 524-682 |
| Cow position: | chr1:83594000-83593837 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 86, 32 |
| Conread position: | 524-705 |
| Cow position: | chr1:102113301-102113115 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 524-792 |
| Cow position: | chr1:79278638-79278373 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 43 |
| Conread position: | 524-809 |
| Cow position: | chr1:51394232-51394509 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 152, 41 |
| Conread position: | 524-809 |
| Cow position: | chr1:83072251-83072532 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 159, 32 |
| Conread position: | 525-740 |
| Cow position: | chr1:24413248-24413473 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 525-788 |
| Cow position: | chr1:73546098-73545841 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 81, 115 |
| Conread position: | 525-792 |
| Cow position: | chr1:33331280-33331020 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 97, 123 |
| Conread position: | 525-793 |
| Cow position: | chr1:13810457-13810722 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 125 |
| Conread position: | 525-805 |
| Cow position: | chr1:724543-724827 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 123, 73 |
| Conread position: | 526-788 |
| Cow position: | chr1:91039367-91039104 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 86, 116 |
| Conread position: | 527-786 |
| Cow position: | chr1:92369539-92369806 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 528-788 |
| Cow position: | chr1:42398385-42398121 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 34 |
| Conread position: | 529-698 |
| Cow position: | chr1:89082920-89083092 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 100, 43 |
| Conread position: | 530-793 |
| Cow position: | chr1:57880979-57880709 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 530-794 |
| Cow position: | chr1:61012123-61012389 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 81, 110 |
| Conread position: | 531-724 |
| Cow position: | chr1:84910816-84910625 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 160, 48 |
| Conread position: | 532-882 |
| Cow position: | chr1:74319969-74319601 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 79, 168 |
| Conread position: | 533-789 |
| Cow position: | chr1:74947310-74947046 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 534-835 |
| Cow position: | chr1:24445811-24445509 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 534-859 |
| Cow position: | chr1:70434817-70435144 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 280, 95 |
| Conread position: | 538-809 |
| Cow position: | chr1:24581400-24581667 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 113 |
| Conread position: | 539-788 |
| Cow position: | chr1:90621692-90621435 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 137 |
| Conread position: | 540-791 |
| Cow position: | chr1:96947881-96947648 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 540-809 |
| Cow position: | chr1:20667918-20667651 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 86, 25 |
| Conread position: | 542-779 |
| Cow position: | chr1:91875085-91874851 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 100, 33 |
| Conread position: | 548-788 |
| Cow position: | chr1:55429128-55428886 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 106 |
| Conread position: | 548-809 |
| Cow position: | chr1:89381102-89381366 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 89, 165 |
| Conread position: | 548-818 |
| Cow position: | chr1:89388163-89388444 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 49, 97 |
| Conread position: | 550-716 |
| Cow position: | chr1:3456701-3456868 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 98, 22 |
| Conread position: | 552-788 |
| Cow position: | chr1:81290345-81290576 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 5, 57 |
| Conread position: | 552-809 |
| Cow position: | chr1:12978512-12978773 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 97, 86 |
| Conread position: | 555-761 |
| Cow position: | chr1:99039518-99039312 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 93, 134 |
| Conread position: | 555-822 |
| Cow position: | chr1:78096772-78097031 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 135, 5 |
| Conread position: | 556-703 |
| Cow position: | chr1:31960060-31960214 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 556-761 |
| Cow position: | chr1:86110896-86110694 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 13, 132 |
| Conread position: | 556-883 |
| Cow position: | chr1:40599879-40600208 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 73 |
| Conread position: | 558-792 |
| Cow position: | chr1:3882627-3882385 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 80, 103 |
| Conread position: | 558-808 |
| Cow position: | chr1:85647944-85647690 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 559-791 |
| Cow position: | chr1:38401631-38401872 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 9, 208 |
| Conread position: | 560-695 |
| Cow position: | chr1:80311310-80311446 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 561-792 |
| Cow position: | chr1:42175565-42175801 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 74, 90 |
| Conread position: | 561-792 |
| Cow position: | chr1:88913158-88913393 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 21, 151 |
| Conread position: | 563-882 |
| Cow position: | chr1:97090167-97090497 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 98 |
| Conread position: | 565-781 |
| Cow position: | chr1:51968306-51968525 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 83, 45 |
| Conread position: | 567-770 |
| Cow position: | chr1:44155098-44155302 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 95, 17 |
| Conread position: | 567-809 |
| Cow position: | chr1:43703254-43703500 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 62, 84 |
| Conread position: | 567-809 |
| Cow position: | chr1:53458543-53458786 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 81, 199 |
| Conread position: | 567-809 |
| Cow position: | chr1:87197674-87197911 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 120, 70 |
| Conread position: | 567-879 |
| Cow position: | chr1:97954611-97954307 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 255, 15 |
| Conread position: | 567-883 |
| Cow position: | chr1:86682716-86682384 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 64, 85 |
| Conread position: | 569-809 |
| Cow position: | chr1:18780485-18780238 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 52 |
| Conread position: | 570-738 |
| Cow position: | chr1:77099698-77099527 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 93, 12 |
| Conread position: | 573-883 |
| Cow position: | chr1:91023615-91023285 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 56, 170 |
| Conread position: | 576-883 |
| Cow position: | chr1:8129111-8128796 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 61, 73 |
| Conread position: | 577-799 |
| Cow position: | chr1:87440325-87440548 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 113, 208 |
| Conread position: | 584-784 |
| Cow position: | chr1:85301282-85301483 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 79 |
| Conread position: | 584-822 |
| Cow position: | chr1:41047436-41047198 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 65 |
| Conread position: | 592-792 |
| Cow position: | chr1:89349834-89350039 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 601-791 |
| Cow position: | chr1:261598-261409 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 107, 44 |
| Conread position: | 608-868 |
| Cow position: | chr1:56618763-56618489 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 85 |
| Conread position: | 620-792 |
| Cow position: | chr1:77232668-77232504 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 637-861 |
| Cow position: | chr1:52467223-52467448 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 651-822 |
| Cow position: | chr1:80584365-80584534 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 665-809 |
| Cow position: | chr1:81481436-81481291 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.