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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8034M07.5
        

               
Conread position:
               
476-782
               

               
Cow position:
               
chr10:40164201-40163899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
495-809
               

               
Cow position:
               
chr10:8403959-8404277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
500-782
               

               
Cow position:
               
chr10:37287423-37287141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
500-788
               

               
Cow position:
               
chr10:59675499-59675214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
116, 17
               

               
Conread position:
               
500-792
               

               
Cow position:
               
chr10:52296251-52296539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
500-793
               

               
Cow position:
               
chr10:53083919-53084215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
500-793
               

               
Cow position:
               
chr10:65071065-65071357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
500-809
               

               
Cow position:
               
chr10:51289008-51289311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
500-883
               

               
Cow position:
               
chr10:59571652-59572045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
502-792
               

               
Cow position:
               
chr10:20552938-20553229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
146, 15
               

               
Conread position:
               
502-809
               

               
Cow position:
               
chr10:37415542-37415851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 15
               

               
Conread position:
               
504-691
               

               
Cow position:
               
chr10:61305040-61305218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
112, 13
               

               
Conread position:
               
505-755
               

               
Cow position:
               
chr10:19655669-19655913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
195, 12
               

               
Conread position:
               
505-805
               

               
Cow position:
               
chr10:9774107-9774413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
505-809
               

               
Cow position:
               
chr10:6489626-6489933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
505-809
               

               
Cow position:
               
chr10:6529959-6530247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
505-809
               

               
Cow position:
               
chr10:50559167-50558863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
506-639
               

               
Cow position:
               
chr10:39123940-39123809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-643
               

               
Cow position:
               
chr10:26608127-26607992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
506-689
               

               
Cow position:
               
chr10:57736403-57736219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
132, 11
               

               
Conread position:
               
506-690
               

               
Cow position:
               
chr10:16740296-16740111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-694
               

               
Cow position:
               
chr10:49923594-49923407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
179, 11
               

               
Conread position:
               
506-696
               

               
Cow position:
               
chr10:37822966-37822774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-698
               

               
Cow position:
               
chr10:32503211-32503401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
506-711
               

               
Cow position:
               
chr10:43451158-43450946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-720
               

               
Cow position:
               
chr10:67443344-67443132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
142, 15
               

               
Conread position:
               
506-730
               

               
Cow position:
               
chr10:6986210-6986430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
506-733
               

               
Cow position:
               
chr10:19104415-19104186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 15
               

               
Conread position:
               
506-738
               

               
Cow position:
               
chr10:5543488-5543258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
506-738
               

               
Cow position:
               
chr10:34554327-34554101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
110, 11
               

               
Conread position:
               
506-740
               

               
Cow position:
               
chr10:35802608-35802379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
146, 15
               

               
Conread position:
               
506-740
               

               
Cow position:
               
chr10:57457093-57457328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
123, 16
               

               
Conread position:
               
506-742
               

               
Cow position:
               
chr10:20505300-20505540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-742
               

               
Cow position:
               
chr10:48388506-48388276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-755
               

               
Cow position:
               
chr10:6516425-6516174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-761
               

               
Cow position:
               
chr10:6173121-6173371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
146, 11
               

               
Conread position:
               
506-761
               

               
Cow position:
               
chr10:20095515-20095774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-782
               

               
Cow position:
               
chr10:77151-77407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-784
               

               
Cow position:
               
chr10:41941819-41941538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
506-785
               

               
Cow position:
               
chr10:15318649-15318922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
136, 11
               

               
Conread position:
               
506-785
               

               
Cow position:
               
chr10:22520405-22520124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 11
               

               
Conread position:
               
506-787
               

               
Cow position:
               
chr10:11212873-11213151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
156, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr10:2974327-2974046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr10:6719663-6719934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
135, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr10:16645433-16645146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr10:19895160-19895434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr10:29816350-29816642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
148, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr10:42745674-42745958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr10:56080413-56080131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr10:63276152-63276434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 11
               

               
Conread position:
               
506-790
               

               
Cow position:
               
chr10:10134739-10135029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
506-790
               

               
Cow position:
               
chr10:63940536-63940813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
98, 11
               

               
Conread position:
               
506-791
               

               
Cow position:
               
chr10:2849116-2849392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
506-791
               

               
Cow position:
               
chr10:37235792-37235509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
506-791
               

               
Cow position:
               
chr10:54504363-54504648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
142, 15
               

               
Conread position:
               
506-791
               

               
Cow position:
               
chr10:58259754-58259481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
150, 17
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr10:2449114-2449395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr10:6505122-6505396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr10:9576278-9576004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr10:9675695-9675419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
131, 9
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr10:10720915-10720628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr10:20897064-20897332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
142, 15
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr10:23506724-23506447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr10:23936244-23936521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr10:24870926-24871209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr10:31401137-31400854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr10:55733838-55733565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
184, 11
               

               
Conread position:
               
506-793
               

               
Cow position:
               
chr10:34607319-34607607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
506-794
               

               
Cow position:
               
chr10:38942187-38942478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-796
               

               
Cow position:
               
chr10:29069917-29070205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
143, 182
               

               
Conread position:
               
506-799
               

               
Cow position:
               
chr10:38725421-38725706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr10:8093554-8093256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
142, 16
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr10:11967084-11966786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr10:21657181-21657482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr10:29251923-29252225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr10:29589079-29588778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr10:30360291-30360580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
189, 16
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr10:35731765-35731466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr10:39875384-39875092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr10:42312669-42312965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr10:53973605-53973903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr10:56828560-56828256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
506-810
               

               
Cow position:
               
chr10:22616882-22616578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
506-810
               

               
Cow position:
               
chr10:61588500-61588198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-820
               

               
Cow position:
               
chr10:53357657-53357968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 74
               

               
Conread position:
               
506-834
               

               
Cow position:
               
chr10:54730772-54731108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-840
               

               
Cow position:
               
chr10:24561226-24560892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
506-859
               

               
Cow position:
               
chr10:721060-721418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
506-859
               

               
Cow position:
               
chr10:23056321-23055960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 11
               

               
Conread position:
               
506-859
               

               
Cow position:
               
chr10:53674584-53674943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
506-861
               

               
Cow position:
               
chr10:21462002-21462348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 11
               

               
Conread position:
               
506-880
               

               
Cow position:
               
chr10:21422391-21422013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
177, 11
               

               
Conread position:
               
506-880
               

               
Cow position:
               
chr10:37529508-37529127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
506-883
               

               
Cow position:
               
chr10:22528140-22527767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
136, 11
               

               
Conread position:
               
506-883
               

               
Cow position:
               
chr10:30224444-30224824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
506-883
               

               
Cow position:
               
chr10:34655350-34654958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
506-883
               

               
Cow position:
               
chr10:50183286-50182901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
122, 15
               

               
Conread position:
               
508-624
               

               
Cow position:
               
chr10:24866411-24866297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
508-711
               

               
Cow position:
               
chr10:69033769-69033575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
183, 9
               

               
Conread position:
               
508-810
               

               
Cow position:
               
chr10:11247736-11248041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
508-883
               

               
Cow position:
               
chr10:28152620-28152243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
120, 7
               

               
Conread position:
               
509-695
               

               
Cow position:
               
chr10:35905066-35904875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
106, 143
               

               
Conread position:
               
509-707
               

               
Cow position:
               
chr10:16414822-16414623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
139, 8
               

               
Conread position:
               
512-792
               

               
Cow position:
               
chr10:24744313-24744590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
149, 40
               

               
Conread position:
               
513-686
               

               
Cow position:
               
chr10:8923700-8923878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
513-809
               

               
Cow position:
               
chr10:13765399-13765103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
513-809
               

               
Cow position:
               
chr10:35796551-35796275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
514-809
               

               
Cow position:
               
chr10:29920066-29919777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 64
               

               
Conread position:
               
514-833
               

               
Cow position:
               
chr10:62286317-62286644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
7, 69
               

               
Conread position:
               
515-690
               

               
Cow position:
               
chr10:29628182-29628006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
99, 59
               

               
Conread position:
               
515-696
               

               
Cow position:
               
chr10:15619040-15618859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
126, 102
               

               
Conread position:
               
515-697
               

               
Cow position:
               
chr10:9445245-9445063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
133, 47
               

               
Conread position:
               
515-724
               

               
Cow position:
               
chr10:34175228-34175015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
127, 51
               

               
Conread position:
               
515-730
               

               
Cow position:
               
chr10:14098553-14098340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
515-738
               

               
Cow position:
               
chr10:24133052-24132829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
114, 23
               

               
Conread position:
               
515-755
               

               
Cow position:
               
chr10:20372363-20372117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
95, 190
               

               
Conread position:
               
515-773
               

               
Cow position:
               
chr10:57786105-57786364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
169, 41
               

               
Conread position:
               
515-779
               

               
Cow position:
               
chr10:38370694-38370423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
515-788
               

               
Cow position:
               
chr10:5890002-5889722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
101, 65
               

               
Conread position:
               
515-793
               

               
Cow position:
               
chr10:22341333-22341623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
114, 100
               

               
Conread position:
               
515-794
               

               
Cow position:
               
chr10:2853878-2853593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
95, 117
               

               
Conread position:
               
515-808
               

               
Cow position:
               
chr10:1978895-1978611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
122, 99
               

               
Conread position:
               
515-809
               

               
Cow position:
               
chr10:10043325-10043046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
515-847
               

               
Cow position:
               
chr10:45769808-45770153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
122, 53
               

               
Conread position:
               
516-697
               

               
Cow position:
               
chr10:32174497-32174682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
516-700
               

               
Cow position:
               
chr10:57034021-57033836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 92
               

               
Conread position:
               
516-727
               

               
Cow position:
               
chr10:64182219-64182429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
104, 48
               

               
Conread position:
               
516-788
               

               
Cow position:
               
chr10:37913416-37913147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
120, 54
               

               
Conread position:
               
516-809
               

               
Cow position:
               
chr10:37818791-37818495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
112, 135
               

               
Conread position:
               
517-788
               

               
Cow position:
               
chr10:15293041-15293306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
93, 113
               

               
Conread position:
               
517-788
               

               
Cow position:
               
chr10:43531025-43531307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
517-850
               

               
Cow position:
               
chr10:33215566-33215914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
518-625
               

               
Cow position:
               
chr10:69998177-69998070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
518-645
               

               
Cow position:
               
chr10:49948302-49948175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
518-646
               

               
Cow position:
               
chr10:35857284-35857159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
518-648
               

               
Cow position:
               
chr10:51306097-51306229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 123
               

               
Conread position:
               
518-690
               

               
Cow position:
               
chr10:5502795-5502970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 114
               

               
Conread position:
               
518-690
               

               
Cow position:
               
chr10:29211729-29211903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 114
               

               
Conread position:
               
518-690
               

               
Cow position:
               
chr10:54936341-54936166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
518-692
               

               
Cow position:
               
chr10:48377874-48377695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
47, 134
               

               
Conread position:
               
518-707
               

               
Cow position:
               
chr10:25475350-25475530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
175, 111
               

               
Conread position:
               
518-714
               

               
Cow position:
               
chr10:35026251-35026446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
518-717
               

               
Cow position:
               
chr10:24871656-24871860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
110, 133
               

               
Conread position:
               
518-720
               

               
Cow position:
               
chr10:50359685-50359890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 126
               

               
Conread position:
               
518-721
               

               
Cow position:
               
chr10:20446871-20447070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
518-738
               

               
Cow position:
               
chr10:19678639-19678864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
518-738
               

               
Cow position:
               
chr10:56475240-56475456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
518-739
               

               
Cow position:
               
chr10:40906082-40906309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
96, 75
               

               
Conread position:
               
518-741
               

               
Cow position:
               
chr10:18154061-18153833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
92, 138
               

               
Conread position:
               
518-761
               

               
Cow position:
               
chr10:66127629-66127872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
94, 150
               

               
Conread position:
               
518-782
               

               
Cow position:
               
chr10:39268367-39268629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
518-786
               

               
Cow position:
               
chr10:11080729-11081002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
518-787
               

               
Cow position:
               
chr10:8923045-8923319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr10:8934258-8934513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr10:10752209-10751950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 51
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr10:16598460-16598729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 53
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr10:22390360-22390637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
111, 38
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr10:33665611-33665883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr10:33891316-33891043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
97, 47
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr10:39398747-39398476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
93, 172
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr10:45379237-45378964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
92, 186
               

               
Conread position:
               
518-790
               

               
Cow position:
               
chr10:15818025-15817751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
131, 111
               

               
Conread position:
               
518-791
               

               
Cow position:
               
chr10:35862459-35862184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 177
               

               
Conread position:
               
518-791
               

               
Cow position:
               
chr10:62353237-62353502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
131, 37
               

               
Conread position:
               
518-792
               

               
Cow position:
               
chr10:6252713-6252452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 129
               

               
Conread position:
               
518-793
               

               
Cow position:
               
chr10:31466515-31466792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
94, 114
               

               
Conread position:
               
518-794
               

               
Cow position:
               
chr10:35791704-35791972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
131, 47
               

               
Conread position:
               
518-795
               

               
Cow position:
               
chr10:31027873-31027595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
518-799
               

               
Cow position:
               
chr10:804966-805241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
110, 76
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr10:5151122-5151407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
175, 38
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr10:6852043-6852324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
175, 37
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr10:10963758-10964049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
117, 77
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr10:13586485-13586765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr10:22472086-22472386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 122
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr10:24732081-24732365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr10:29166049-29166334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
70, 177
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr10:38014144-38014428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
130, 38
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr10:40421074-40420786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 179
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr10:45370826-45371117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
130, 38
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr10:48462567-48462282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
98, 39
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr10:52278498-52278786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
127, 156
               

               
Conread position:
               
518-818
               

               
Cow position:
               
chr10:13311503-13311803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
114, 129
               

               
Conread position:
               
518-828
               

               
Cow position:
               
chr10:1427811-1428117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 109
               

               
Conread position:
               
518-835
               

               
Cow position:
               
chr10:51944133-51944449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
130, 42
               

               
Conread position:
               
518-843
               

               
Cow position:
               
chr10:20997506-20997188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
101, 73
               

               
Conread position:
               
518-847
               

               
Cow position:
               
chr10:22049024-22049360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
518-847
               

               
Cow position:
               
chr10:24763250-24763582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
120, 62
               

               
Conread position:
               
518-883
               

               
Cow position:
               
chr10:7367018-7366639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 211
               

               
Conread position:
               
518-883
               

               
Cow position:
               
chr10:10468749-10469116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
518-883
               

               
Cow position:
               
chr10:13391282-13390913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
124, 156
               

               
Conread position:
               
519-723
               

               
Cow position:
               
chr10:18229948-18229740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 184
               

               
Conread position:
               
519-773
               

               
Cow position:
               
chr10:50609310-50609568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
519-788
               

               
Cow position:
               
chr10:24313117-24312846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
519-788
               

               
Cow position:
               
chr10:37014408-37014674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
91, 46
               

               
Conread position:
               
519-793
               

               
Cow position:
               
chr10:28840725-28841003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
119, 69
               

               
Conread position:
               
519-801
               

               
Cow position:
               
chr10:41803124-41802843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
275, 54
               

               
Conread position:
               
519-809
               

               
Cow position:
               
chr10:47412336-47412045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
110, 132
               

               
Conread position:
               
519-833
               

               
Cow position:
               
chr10:8413278-8412966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
116, 9
               

               
Conread position:
               
520-682
               

               
Cow position:
               
chr10:15874666-15874501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
107, 118
               

               
Conread position:
               
520-781
               

               
Cow position:
               
chr10:24022510-24022248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
57, 68
               

               
Conread position:
               
520-787
               

               
Cow position:
               
chr10:24096606-24096332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 110
               

               
Conread position:
               
520-788
               

               
Cow position:
               
chr10:9083072-9083342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
91, 61
               

               
Conread position:
               
520-788
               

               
Cow position:
               
chr10:18041958-18042220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 45
               

               
Conread position:
               
520-792
               

               
Cow position:
               
chr10:31362437-31362169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
116, 14
               

               
Conread position:
               
520-793
               

               
Cow position:
               
chr10:43487484-43487758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
100, 38
               

               
Conread position:
               
520-807
               

               
Cow position:
               
chr10:3998678-3998965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
122, 67
               

               
Conread position:
               
520-862
               

               
Cow position:
               
chr10:6665773-6665435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
64, 126
               

               
Conread position:
               
521-708
               

               
Cow position:
               
chr10:48257505-48257316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
174, 11
               

               
Conread position:
               
521-714
               

               
Cow position:
               
chr10:8460300-8460496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 134
               

               
Conread position:
               
521-714
               

               
Cow position:
               
chr10:54375666-54375470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 181
               

               
Conread position:
               
521-714
               

               
Cow position:
               
chr10:56106812-56107013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
521-721
               

               
Cow position:
               
chr10:65000340-65000134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 130
               

               
Conread position:
               
521-741
               

               
Cow position:
               
chr10:13050519-13050301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 165
               

               
Conread position:
               
521-787
               

               
Cow position:
               
chr10:41230061-41230330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
90, 179
               

               
Conread position:
               
521-788
               

               
Cow position:
               
chr10:130994-131264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
89, 134
               

               
Conread position:
               
521-788
               

               
Cow position:
               
chr10:6407730-6408000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
90, 107
               

               
Conread position:
               
521-788
               

               
Cow position:
               
chr10:37512474-37512198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
521-788
               

               
Cow position:
               
chr10:44783115-44783387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 134
               

               
Conread position:
               
521-790
               

               
Cow position:
               
chr10:62956087-62956359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 52
               

               
Conread position:
               
521-808
               

               
Cow position:
               
chr10:57142437-57142155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
170, 46
               

               
Conread position:
               
521-818
               

               
Cow position:
               
chr10:35903171-35902885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
285, 91
               

               
Conread position:
               
521-824
               

               
Cow position:
               
chr10:30352618-30352925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 240
               

               
Conread position:
               
521-868
               

               
Cow position:
               
chr10:34661543-34661194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
108, 130
               

               
Conread position:
               
521-883
               

               
Cow position:
               
chr10:37668387-37668026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 277
               

               
Conread position:
               
522-820
               

               
Cow position:
               
chr10:10148425-10148721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
67, 130
               

               
Conread position:
               
523-738
               

               
Cow position:
               
chr10:33733093-33732876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 46
               

               
Conread position:
               
523-788
               

               
Cow position:
               
chr10:18636180-18636448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
88, 158
               

               
Conread position:
               
523-789
               

               
Cow position:
               
chr10:66194528-66194263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 42
               

               
Conread position:
               
523-850
               

               
Cow position:
               
chr10:28176617-28176278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
104, 138
               

               
Conread position:
               
524-788
               

               
Cow position:
               
chr10:17844536-17844807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
524-793
               

               
Cow position:
               
chr10:52569369-52569637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 41
               

               
Conread position:
               
524-809
               

               
Cow position:
               
chr10:7816885-7817169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
113, 39
               

               
Conread position:
               
525-720
               

               
Cow position:
               
chr10:23447865-23447669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
104, 166
               

               
Conread position:
               
525-799
               

               
Cow position:
               
chr10:3362397-3362678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
165, 113
               

               
Conread position:
               
525-807
               

               
Cow position:
               
chr10:1996887-1996611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
123, 163
               

               
Conread position:
               
527-809
               

               
Cow position:
               
chr10:35779124-35778840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
102, 9
               

               
Conread position:
               
528-704
               

               
Cow position:
               
chr10:33067788-33067609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
530-788
               

               
Cow position:
               
chr10:17836732-17836992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
530-828
               

               
Cow position:
               
chr10:35246160-35245866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
156, 119
               

               
Conread position:
               
540-755
               

               
Cow position:
               
chr10:55580474-55580266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
145, 99
               

               
Conread position:
               
540-788
               

               
Cow position:
               
chr10:45678806-45679058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
540-798
               

               
Cow position:
               
chr10:39304059-39303796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
540-809
               

               
Cow position:
               
chr10:31534534-31534797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
150, 56
               

               
Conread position:
               
544-788
               

               
Cow position:
               
chr10:6435852-6436100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 86
               

               
Conread position:
               
547-789
               

               
Cow position:
               
chr10:40737799-40738035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 93
               

               
Conread position:
               
548-809
               

               
Cow position:
               
chr10:29339587-29339335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
142, 97
               

               
Conread position:
               
548-824
               

               
Cow position:
               
chr10:10119996-10120266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
100, 118
               

               
Conread position:
               
552-800
               

               
Cow position:
               
chr10:17073557-17073309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
238, 85
               

               
Conread position:
               
555-736
               

               
Cow position:
               
chr10:35901134-35901309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
556-791
               

               
Cow position:
               
chr10:22396057-22396296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
71, 214
               

               
Conread position:
               
556-791
               

               
Cow position:
               
chr10:51696553-51696784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
92, 31
               

               
Conread position:
               
556-792
               

               
Cow position:
               
chr10:24780993-24781233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
93, 73
               

               
Conread position:
               
557-793
               

               
Cow position:
               
chr10:47773536-47773773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
80, 210
               

               
Conread position:
               
558-818
               

               
Cow position:
               
chr10:54469586-54469323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
80, 66
               

               
Conread position:
               
559-809
               

               
Cow position:
               
chr10:2613175-2613428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 92
               

               
Conread position:
               
564-788
               

               
Cow position:
               
chr10:11463853-11463626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
45, 88
               

               
Conread position:
               
565-791
               

               
Cow position:
               
chr10:15462304-15462535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 86
               

               
Conread position:
               
565-792
               

               
Cow position:
               
chr10:30523252-30523018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
58, 90
               

               
Conread position:
               
565-809
               

               
Cow position:
               
chr10:4184006-4184257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 87
               

               
Conread position:
               
565-809
               

               
Cow position:
               
chr10:46195597-46195844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
81, 202
               

               
Conread position:
               
565-809
               

               
Cow position:
               
chr10:52695914-52695665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
566-795
               

               
Cow position:
               
chr10:24756232-24756459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
83, 71
               

               
Conread position:
               
566-880
               

               
Cow position:
               
chr10:48573876-48573551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 289
               

               
Conread position:
               
567-731
               

               
Cow position:
               
chr10:24971792-24971627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
567-809
               

               
Cow position:
               
chr10:27828147-27828383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
567-809
               

               
Cow position:
               
chr10:28776171-28776412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
567-879
               

               
Cow position:
               
chr10:28395483-28395160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
68, 82
               

               
Conread position:
               
571-809
               

               
Cow position:
               
chr10:39227966-39228209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
577-788
               

               
Cow position:
               
chr10:55622019-55621813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
590-809
               

               
Cow position:
               
chr10:19191616-19191815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
591-809
               

               
Cow position:
               
chr10:6543563-6543787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
47, 215
               

               
Conread position:
               
601-883
               

               
Cow position:
               
chr10:22633774-22633496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 102
               

               
Conread position:
               
618-787
               

               
Cow position:
               
chr10:3364309-3364143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
634-809
               

               
Cow position:
               
chr10:22888927-22888753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 14
               
Show alignments to all cow chromosomes.