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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8034M07.5
        

               
Conread position:
               
483-788
               

               
Cow position:
               
chr22:16044672-16044355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
18, 35
               

               
Conread position:
               
486-793
               

               
Cow position:
               
chr22:19828109-19827797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
500-788
               

               
Cow position:
               
chr22:6493945-6494222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
500-788
               

               
Cow position:
               
chr22:10631147-10631447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
500-791
               

               
Cow position:
               
chr22:34441859-34441569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
150, 17
               

               
Conread position:
               
500-792
               

               
Cow position:
               
chr22:40071744-40072042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
500-804
               

               
Cow position:
               
chr22:26339535-26339831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
500-809
               

               
Cow position:
               
chr22:1289744-1289447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
500-822
               

               
Cow position:
               
chr22:27431908-27431608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
500-868
               

               
Cow position:
               
chr22:15568243-15567864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
500-868
               

               
Cow position:
               
chr22:30094021-30094401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
132, 15
               

               
Conread position:
               
500-879
               

               
Cow position:
               
chr22:6610579-6610191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
501-809
               

               
Cow position:
               
chr22:6721290-6720999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
171, 16
               

               
Conread position:
               
505-740
               

               
Cow position:
               
chr22:14118755-14118994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
505-792
               

               
Cow position:
               
chr22:8324026-8324304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
505-792
               

               
Cow position:
               
chr22:14882329-14882051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
176, 9
               

               
Conread position:
               
505-799
               

               
Cow position:
               
chr22:22861131-22860840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
143, 12
               

               
Conread position:
               
505-809
               

               
Cow position:
               
chr22:17814009-17814314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
505-861
               

               
Cow position:
               
chr22:43397798-43398152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
140, 12
               

               
Conread position:
               
505-862
               

               
Cow position:
               
chr22:10122169-10122520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
185, 16
               

               
Conread position:
               
505-883
               

               
Cow position:
               
chr22:17852842-17852464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
284, 12
               

               
Conread position:
               
505-883
               

               
Cow position:
               
chr22:30483693-30484078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
506-621
               

               
Cow position:
               
chr22:898538-898652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
506-628
               

               
Cow position:
               
chr22:28120573-28120693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-698
               

               
Cow position:
               
chr22:33485821-33485629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
506-704
               

               
Cow position:
               
chr22:25206188-25205984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
506-718
               

               
Cow position:
               
chr22:38940167-38939958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
506-720
               

               
Cow position:
               
chr22:2216606-2216814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
506-723
               

               
Cow position:
               
chr22:39472594-39472380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
506-730
               

               
Cow position:
               
chr22:25361272-25361491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
131, 9
               

               
Conread position:
               
506-737
               

               
Cow position:
               
chr22:2148355-2148583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
139, 16
               

               
Conread position:
               
506-737
               

               
Cow position:
               
chr22:13950954-13951190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
130, 13
               

               
Conread position:
               
506-738
               

               
Cow position:
               
chr22:10585919-10585692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
181, 11
               

               
Conread position:
               
506-738
               

               
Cow position:
               
chr22:36569760-36569540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
132, 11
               

               
Conread position:
               
506-740
               

               
Cow position:
               
chr22:8877054-8877278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
506-740
               

               
Cow position:
               
chr22:43812636-43812410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 11
               

               
Conread position:
               
506-741
               

               
Cow position:
               
chr22:3325363-3325599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-742
               

               
Cow position:
               
chr22:2702010-2702246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
506-742
               

               
Cow position:
               
chr22:12974611-12974369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-742
               

               
Cow position:
               
chr22:47582688-47582914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-751
               

               
Cow position:
               
chr22:23865243-23865494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
506-754
               

               
Cow position:
               
chr22:39494421-39494170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-761
               

               
Cow position:
               
chr22:7882332-7882589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
122, 15
               

               
Conread position:
               
506-768
               

               
Cow position:
               
chr22:295155-294892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
506-773
               

               
Cow position:
               
chr22:13011495-13011222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
506-781
               

               
Cow position:
               
chr22:10685306-10685034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
116, 15
               

               
Conread position:
               
506-781
               

               
Cow position:
               
chr22:11146684-11146973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
506-782
               

               
Cow position:
               
chr22:26166833-26166571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-783
               

               
Cow position:
               
chr22:27171476-27171210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
158, 15
               

               
Conread position:
               
506-787
               

               
Cow position:
               
chr22:14366172-14365898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
126, 15
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr22:4645559-4645834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
129, 9
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr22:10302792-10303077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
109, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr22:12968288-12968008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr22:16532862-16533135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
110, 14
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr22:21502517-21502806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
15, 147
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr22:23115523-23115247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
184, 7
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr22:23856830-23857107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr22:26141054-26141336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr22:32892477-32892754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-790
               

               
Cow position:
               
chr22:4076117-4075823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 11
               

               
Conread position:
               
506-791
               

               
Cow position:
               
chr22:3993392-3993674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
130, 11
               

               
Conread position:
               
506-791
               

               
Cow position:
               
chr22:21295943-21295661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
135, 11
               

               
Conread position:
               
506-791
               

               
Cow position:
               
chr22:38439376-38439093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
130, 16
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr22:845684-845968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr22:4017257-4017538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr22:4061161-4060882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
141, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr22:14691194-14690906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr22:20626623-20626902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr22:21890578-21890295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr22:25743170-25742884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr22:30049791-30049501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr22:31646276-31646557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
190, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr22:43119947-43119664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
135, 8
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr22:43292119-43291837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-793
               

               
Cow position:
               
chr22:2470465-2470174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-793
               

               
Cow position:
               
chr22:4108957-4108664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
506-793
               

               
Cow position:
               
chr22:27825618-27825906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-793
               

               
Cow position:
               
chr22:38930732-38930441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
104, 9
               

               
Conread position:
               
506-794
               

               
Cow position:
               
chr22:16273412-16273707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-803
               

               
Cow position:
               
chr22:5290625-5290925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
506-808
               

               
Cow position:
               
chr22:10161743-10162048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr22:534275-534581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
104, 9
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr22:1590802-1591106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr22:4119786-4119480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr22:8412306-8412610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
113, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr22:8481429-8481726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr22:10294832-10295117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
184, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr22:10314859-10315158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
141, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr22:10937051-10936769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr22:40048345-40048636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr22:41982933-41982640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
199, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr22:44717492-44717803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
506-811
               

               
Cow position:
               
chr22:22222974-22223271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
506-818
               

               
Cow position:
               
chr22:19340981-19341292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-820
               

               
Cow position:
               
chr22:28146466-28146769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-822
               

               
Cow position:
               
chr22:3964967-3965281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
506-824
               

               
Cow position:
               
chr22:2623733-2623426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
506-826
               

               
Cow position:
               
chr22:40121096-40120776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
506-843
               

               
Cow position:
               
chr22:14844352-14844686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-865
               

               
Cow position:
               
chr22:13300191-13300543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
506-868
               

               
Cow position:
               
chr22:15950595-15950229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
506-879
               

               
Cow position:
               
chr22:28370728-28371098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
126, 17
               

               
Conread position:
               
506-880
               

               
Cow position:
               
chr22:43788347-43787974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
506-881
               

               
Cow position:
               
chr22:29290355-29289977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 11
               

               
Conread position:
               
506-883
               

               
Cow position:
               
chr22:17950175-17949803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
289, 11
               

               
Conread position:
               
506-885
               

               
Cow position:
               
chr22:30698961-30699338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
508-809
               

               
Cow position:
               
chr22:22160504-22160808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
124, 9
               

               
Conread position:
               
509-791
               

               
Cow position:
               
chr22:8732777-8732504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
510-699
               

               
Cow position:
               
chr22:33949216-33949023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
513-771
               

               
Cow position:
               
chr22:13861374-13861627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
199, 50
               

               
Conread position:
               
513-829
               

               
Cow position:
               
chr22:26184375-26184058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
515-792
               

               
Cow position:
               
chr22:5616088-5616367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
22, 178
               

               
Conread position:
               
515-799
               

               
Cow position:
               
chr22:17993241-17992959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
113, 31
               

               
Conread position:
               
515-809
               

               
Cow position:
               
chr22:26658844-26659124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
114, 41
               

               
Conread position:
               
515-879
               

               
Cow position:
               
chr22:10532283-10532660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
50, 129
               

               
Conread position:
               
515-883
               

               
Cow position:
               
chr22:25222114-25221729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
516-738
               

               
Cow position:
               
chr22:4974630-4974412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 40
               

               
Conread position:
               
516-788
               

               
Cow position:
               
chr22:10983134-10983411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
114, 176
               

               
Conread position:
               
516-788
               

               
Cow position:
               
chr22:43743540-43743284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
200, 68
               

               
Conread position:
               
517-809
               

               
Cow position:
               
chr22:11613211-11613506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
93, 186
               

               
Conread position:
               
518-646
               

               
Cow position:
               
chr22:34930956-34930828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
518-705
               

               
Cow position:
               
chr22:19848604-19848417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
124, 6
               

               
Conread position:
               
518-709
               

               
Cow position:
               
chr22:30689423-30689615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
145, 178
               

               
Conread position:
               
518-711
               

               
Cow position:
               
chr22:45685241-45685040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
518-729
               

               
Cow position:
               
chr22:36546139-36545923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
518-739
               

               
Cow position:
               
chr22:11370799-11370578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
114, 133
               

               
Conread position:
               
518-741
               

               
Cow position:
               
chr22:59398-59625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
68, 80
               

               
Conread position:
               
518-741
               

               
Cow position:
               
chr22:6202705-6202929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
97, 135
               

               
Conread position:
               
518-786
               

               
Cow position:
               
chr22:15039393-15039123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 44
               

               
Conread position:
               
518-787
               

               
Cow position:
               
chr22:3987304-3987578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 138
               

               
Conread position:
               
518-787
               

               
Cow position:
               
chr22:15090532-15090802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
518-787
               

               
Cow position:
               
chr22:34712506-34712786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
92, 28
               

               
Conread position:
               
518-787
               

               
Cow position:
               
chr22:44180385-44180653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr22:2502629-2502886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 38
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr22:3908710-3908991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 189
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr22:4994129-4993849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
111, 136
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr22:6149594-6149330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
92, 138
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr22:16327297-16327558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
93, 54
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr22:17295139-17294875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
97, 63
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr22:32326593-32326860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
111, 19
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr22:35753514-35753248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
518-789
               

               
Cow position:
               
chr22:12682001-12681738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
114, 34
               

               
Conread position:
               
518-791
               

               
Cow position:
               
chr22:17764169-17764443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
111, 43
               

               
Conread position:
               
518-792
               

               
Cow position:
               
chr22:7967489-7967767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
82, 234
               

               
Conread position:
               
518-792
               

               
Cow position:
               
chr22:18259020-18259284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
130, 42
               

               
Conread position:
               
518-792
               

               
Cow position:
               
chr22:18838042-18838321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
130, 69
               

               
Conread position:
               
518-792
               

               
Cow position:
               
chr22:28356827-28357094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
111, 133
               

               
Conread position:
               
518-793
               

               
Cow position:
               
chr22:36560869-36560593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
518-794
               

               
Cow position:
               
chr22:11130663-11130937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
518-797
               

               
Cow position:
               
chr22:3251199-3250924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
111, 20
               

               
Conread position:
               
518-797
               

               
Cow position:
               
chr22:29013669-29013950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
92, 38
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr22:2403664-2403962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
120, 263
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr22:3316920-3317202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr22:13957858-13957562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
49, 100
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr22:21012182-21012466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
135, 47
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr22:37324338-37324624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 44
               

               
Conread position:
               
518-811
               

               
Cow position:
               
chr22:25246701-25246996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
91, 44
               

               
Conread position:
               
518-858
               

               
Cow position:
               
chr22:891348-891009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
160, 63
               

               
Conread position:
               
518-868
               

               
Cow position:
               
chr22:7884783-7885125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 47
               

               
Conread position:
               
518-878
               

               
Cow position:
               
chr22:864726-864364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
107, 20
               

               
Conread position:
               
518-880
               

               
Cow position:
               
chr22:5016300-5016658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
97, 120
               

               
Conread position:
               
519-637
               

               
Cow position:
               
chr22:33985973-33985855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
519-738
               

               
Cow position:
               
chr22:6123103-6122893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
129, 40
               

               
Conread position:
               
519-788
               

               
Cow position:
               
chr22:1309935-1309673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
129, 33
               

               
Conread position:
               
519-792
               

               
Cow position:
               
chr22:21355352-21355076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 170
               

               
Conread position:
               
519-794
               

               
Cow position:
               
chr22:26134442-26134157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
519-797
               

               
Cow position:
               
chr22:28058251-28057980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 47
               

               
Conread position:
               
519-800
               

               
Cow position:
               
chr22:28640361-28640078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
129, 174
               

               
Conread position:
               
519-809
               

               
Cow position:
               
chr22:4563155-4563445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
129, 43
               

               
Conread position:
               
519-809
               

               
Cow position:
               
chr22:8138465-8138183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
519-809
               

               
Cow position:
               
chr22:22612905-22613188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
170, 71
               

               
Conread position:
               
520-782
               

               
Cow position:
               
chr22:4043727-4043988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
520-808
               

               
Cow position:
               
chr22:24066440-24066152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
114, 47
               

               
Conread position:
               
520-809
               

               
Cow position:
               
chr22:16251773-16251491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
521-684
               

               
Cow position:
               
chr22:13016999-13016837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
36, 125
               

               
Conread position:
               
521-699
               

               
Cow position:
               
chr22:9251218-9251041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
111, 52
               

               
Conread position:
               
521-738
               

               
Cow position:
               
chr22:26151325-26151101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
62, 106
               

               
Conread position:
               
521-738
               

               
Cow position:
               
chr22:41245040-41245259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
127, 46
               

               
Conread position:
               
521-773
               

               
Cow position:
               
chr22:11686149-11685887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 119
               

               
Conread position:
               
521-782
               

               
Cow position:
               
chr22:5675377-5675126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
127, 35
               

               
Conread position:
               
521-787
               

               
Cow position:
               
chr22:11819913-11819643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 161
               

               
Conread position:
               
521-788
               

               
Cow position:
               
chr22:31213368-31213640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 107
               

               
Conread position:
               
521-792
               

               
Cow position:
               
chr22:9127197-9127473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
128, 108
               

               
Conread position:
               
521-806
               

               
Cow position:
               
chr22:40720493-40720216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
122, 107
               

               
Conread position:
               
521-809
               

               
Cow position:
               
chr22:1068121-1067832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
115, 58
               

               
Conread position:
               
521-809
               

               
Cow position:
               
chr22:11257941-11257666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
521-861
               

               
Cow position:
               
chr22:42612252-42612592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
127, 75
               

               
Conread position:
               
521-865
               

               
Cow position:
               
chr22:36633026-36633360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
522-792
               

               
Cow position:
               
chr22:3950037-3950317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 187
               

               
Conread position:
               
522-793
               

               
Cow position:
               
chr22:1279593-1279319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
522-809
               

               
Cow position:
               
chr22:30998693-30998968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
165, 33
               

               
Conread position:
               
522-883
               

               
Cow position:
               
chr22:9977615-9977968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
300, 58
               

               
Conread position:
               
523-701
               

               
Cow position:
               
chr22:3269682-3269500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
125, 77
               

               
Conread position:
               
523-792
               

               
Cow position:
               
chr22:30269210-30269473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
523-823
               

               
Cow position:
               
chr22:11458621-11458917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
89, 108
               

               
Conread position:
               
524-785
               

               
Cow position:
               
chr22:10420828-10421090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
525-692
               

               
Cow position:
               
chr22:7252849-7252676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
526-791
               

               
Cow position:
               
chr22:877311-877579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
90, 69
               

               
Conread position:
               
528-782
               

               
Cow position:
               
chr22:4372843-4373091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
528-795
               

               
Cow position:
               
chr22:911904-912166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
135, 28
               

               
Conread position:
               
530-781
               

               
Cow position:
               
chr22:10678181-10677937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
151, 50
               

               
Conread position:
               
531-783
               

               
Cow position:
               
chr22:18021220-18020976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
532-782
               

               
Cow position:
               
chr22:12313225-12313480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 120
               

               
Conread position:
               
532-809
               

               
Cow position:
               
chr22:6327970-6327687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
533-809
               

               
Cow position:
               
chr22:12803578-12803303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
105, 18
               

               
Conread position:
               
534-791
               

               
Cow position:
               
chr22:17152485-17152741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
112, 157
               

               
Conread position:
               
536-883
               

               
Cow position:
               
chr22:16292111-16291759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
111, 93
               

               
Conread position:
               
537-865
               

               
Cow position:
               
chr22:36433159-36432816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
159, 53
               

               
Conread position:
               
538-883
               

               
Cow position:
               
chr22:590147-590493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
112, 261
               

               
Conread position:
               
539-767
               

               
Cow position:
               
chr22:41271187-41270961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
540-697
               

               
Cow position:
               
chr22:8446749-8446910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
540-761
               

               
Cow position:
               
chr22:39696102-39696322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
121, 23
               

               
Conread position:
               
546-809
               

               
Cow position:
               
chr22:9283781-9283516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
91, 6
               

               
Conread position:
               
547-794
               

               
Cow position:
               
chr22:12800480-12800738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
63, 107
               

               
Conread position:
               
548-716
               

               
Cow position:
               
chr22:1342553-1342727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
87, 103
               

               
Conread position:
               
548-792
               

               
Cow position:
               
chr22:1563432-1563188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 105
               

               
Conread position:
               
550-791
               

               
Cow position:
               
chr22:10567880-10567650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
556-780
               

               
Cow position:
               
chr22:32480653-32480427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
92, 124
               

               
Conread position:
               
556-792
               

               
Cow position:
               
chr22:45796169-45796402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
76, 91
               

               
Conread position:
               
556-830
               

               
Cow position:
               
chr22:3367018-3367290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
130, 22
               

               
Conread position:
               
567-782
               

               
Cow position:
               
chr22:19173536-19173751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
124, 77
               

               
Conread position:
               
568-883
               

               
Cow position:
               
chr22:30818049-30818383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 70
               

               
Conread position:
               
570-773
               

               
Cow position:
               
chr22:226613-226408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
573-788
               

               
Cow position:
               
chr22:1874536-1874754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 130
               

               
Conread position:
               
577-809
               

               
Cow position:
               
chr22:25387172-25387409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 15
               

               
Conread position:
               
582-883
               

               
Cow position:
               
chr22:16095049-16094732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
56, 110
               

               
Conread position:
               
585-792
               

               
Cow position:
               
chr22:40789424-40789631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
585-818
               

               
Cow position:
               
chr22:17224809-17224578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               
Show alignments to all cow chromosomes.