Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8034M07.5 |
| Conread position: | 477-696 |
| Cow position: | chr26:30128250-30128032 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 95 |
| Conread position: | 494-738 |
| Cow position: | chr26:25407002-25407251 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 16, 11 |
| Conread position: | 500-738 |
| Cow position: | chr26:3182154-3181908 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 18 |
| Conread position: | 500-792 |
| Cow position: | chr26:8700255-8699962 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 6, 18 |
| Conread position: | 500-793 |
| Cow position: | chr26:33857402-33857107 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 502-804 |
| Cow position: | chr26:34108563-34108855 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 230, 7 |
| Conread position: | 505-818 |
| Cow position: | chr26:20291881-20291581 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 506-708 |
| Cow position: | chr26:21351489-21351688 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 123, 11 |
| Conread position: | 506-734 |
| Cow position: | chr26:24280631-24280851 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 184, 11 |
| Conread position: | 506-738 |
| Cow position: | chr26:11263439-11263672 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 111, 11 |
| Conread position: | 506-781 |
| Cow position: | chr26:14174098-14174374 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 109, 11 |
| Conread position: | 506-792 |
| Cow position: | chr26:32670690-32670411 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 161, 11 |
| Conread position: | 506-793 |
| Cow position: | chr26:23001243-23000954 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 104, 11 |
| Conread position: | 506-794 |
| Cow position: | chr26:27163249-27163537 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 506-804 |
| Cow position: | chr26:8352760-8353066 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 129, 11 |
| Conread position: | 506-806 |
| Cow position: | chr26:25393832-25394138 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 139, 11 |
| Conread position: | 506-807 |
| Cow position: | chr26:7148497-7148202 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 125, 11 |
| Conread position: | 506-809 |
| Cow position: | chr26:9491730-9492024 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 506-809 |
| Cow position: | chr26:13021347-13021043 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 11 |
| Conread position: | 506-809 |
| Cow position: | chr26:17057484-17057781 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 123, 14 |
| Conread position: | 506-809 |
| Cow position: | chr26:27491703-27491399 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 129, 12 |
| Conread position: | 506-822 |
| Cow position: | chr26:21637235-21636922 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 506-840 |
| Cow position: | chr26:16783624-16783960 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 506-868 |
| Cow position: | chr26:5306934-5307296 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 506-883 |
| Cow position: | chr26:25526048-25526440 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 142, 11 |
| Conread position: | 506-883 |
| Cow position: | chr26:32898069-32897686 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 267 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 143, 11 |
| Conread position: | 507-799 |
| Cow position: | chr26:31605210-31605498 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 129, 10 |
| Conread position: | 507-840 |
| Cow position: | chr26:26888331-26887998 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 10 |
| Conread position: | 508-741 |
| Cow position: | chr26:28760283-28760057 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 125, 9 |
| Conread position: | 508-788 |
| Cow position: | chr26:17148502-17148786 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 140, 208 |
| Conread position: | 513-841 |
| Cow position: | chr26:34847548-34847880 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 7, 36 |
| Conread position: | 515-741 |
| Cow position: | chr26:16549789-16550018 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 58, 184 |
| Conread position: | 515-808 |
| Cow position: | chr26:13801920-13802212 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 114, 93 |
| Conread position: | 515-836 |
| Cow position: | chr26:20129866-20129548 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 115, 228 |
| Conread position: | 515-857 |
| Cow position: | chr26:23097369-23097026 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 92, 33 |
| Conread position: | 515-865 |
| Cow position: | chr26:35704195-35704548 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 516-741 |
| Cow position: | chr26:6447797-6447563 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 518-687 |
| Cow position: | chr26:1329357-1329525 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 124, 26 |
| Conread position: | 518-698 |
| Cow position: | chr26:6252659-6252844 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 518-703 |
| Cow position: | chr26:2246762-2246951 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 92, 186 |
| Conread position: | 518-725 |
| Cow position: | chr26:7525656-7525455 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 174, 38 |
| Conread position: | 518-741 |
| Cow position: | chr26:6498068-6498292 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 93, 137 |
| Conread position: | 518-753 |
| Cow position: | chr26:13706187-13705951 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 117, 27 |
| Conread position: | 518-787 |
| Cow position: | chr26:10764031-10764292 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 246, 93 |
| Conread position: | 518-788 |
| Cow position: | chr26:32652914-32652653 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 518-791 |
| Cow position: | chr26:6793952-6794229 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 92, 183 |
| Conread position: | 518-792 |
| Cow position: | chr26:3072151-3071890 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 129, 63 |
| Conread position: | 519-730 |
| Cow position: | chr26:20846436-20846646 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 129, 182 |
| Conread position: | 519-788 |
| Cow position: | chr26:3706613-3706873 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 519-794 |
| Cow position: | chr26:33202246-33201983 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 519-883 |
| Cow position: | chr26:32955811-32955452 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 116, 26 |
| Conread position: | 520-791 |
| Cow position: | chr26:14175095-14175366 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 118, 26 |
| Conread position: | 521-709 |
| Cow position: | chr26:17428124-17427936 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 90, 45 |
| Conread position: | 521-714 |
| Cow position: | chr26:32019035-32019233 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 90, 134 |
| Conread position: | 521-741 |
| Cow position: | chr26:8897075-8896847 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 521-794 |
| Cow position: | chr26:33096751-33096471 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 90, 222 |
| Conread position: | 521-809 |
| Cow position: | chr26:21859639-21859926 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 119, 38 |
| Conread position: | 521-809 |
| Cow position: | chr26:32058467-32058749 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 183, 118 |
| Conread position: | 521-883 |
| Cow position: | chr26:21418637-21418259 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 90, 59 |
| Conread position: | 522-737 |
| Cow position: | chr26:32035623-32035412 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 522-787 |
| Cow position: | chr26:22191304-22191571 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 89, 133 |
| Conread position: | 523-797 |
| Cow position: | chr26:33112569-33112296 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 109, 128 |
| Conread position: | 530-787 |
| Cow position: | chr26:16179383-16179642 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 81, 153 |
| Conread position: | 530-788 |
| Cow position: | chr26:829632-829886 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 43 |
| Conread position: | 530-799 |
| Cow position: | chr26:23315590-23315866 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 105, 168 |
| Conread position: | 530-805 |
| Cow position: | chr26:22354237-22354511 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 81, 35 |
| Conread position: | 533-793 |
| Cow position: | chr26:29332917-29333179 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 79, 33 |
| Conread position: | 540-859 |
| Cow position: | chr26:22249648-22249321 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 83, 165 |
| Conread position: | 546-880 |
| Cow position: | chr26:22892609-22892260 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 247 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 11, 110 |
| Conread position: | 550-809 |
| Cow position: | chr26:16721707-16721966 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 552-822 |
| Cow position: | chr26:23583104-23582831 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 80, 99 |
| Conread position: | 563-791 |
| Cow position: | chr26:26950591-26950371 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 127, 16 |
| Conread position: | 564-809 |
| Cow position: | chr26:20769709-20769953 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 121, 65 |
| Conread position: | 567-808 |
| Cow position: | chr26:12145262-12145017 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 567-809 |
| Cow position: | chr26:12964839-12964595 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 62, 84 |
| Conread position: | 567-809 |
| Cow position: | chr26:19445984-19446234 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 65, 178 |
| Conread position: | 567-818 |
| Cow position: | chr26:647859-647615 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 125, 17 |
| Conread position: | 567-828 |
| Cow position: | chr26:33736693-33736431 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 37 |
| Conread position: | 568-740 |
| Cow position: | chr26:31572110-31572279 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 75, 61 |
| Conread position: | 568-883 |
| Cow position: | chr26:9535376-9535707 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 578-809 |
| Cow position: | chr26:19110053-19110286 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 594-800 |
| Cow position: | chr26:18651750-18651543 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 54, 124 |
| Conread position: | 603-881 |
| Cow position: | chr26:24240569-24240875 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 160 |
Show alignments to all cow chromosomes.