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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8034M07.5
        

               
Conread position:
               
480-791
               

               
Cow position:
               
chr4:10916091-10915776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
485-788
               

               
Cow position:
               
chr4:16762974-16762669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
102, 9
               

               
Conread position:
               
500-690
               

               
Cow position:
               
chr4:54468524-54468332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
500-788
               

               
Cow position:
               
chr4:18095908-18095617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
500-794
               

               
Cow position:
               
chr4:36396354-36396067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
110, 17
               

               
Conread position:
               
500-802
               

               
Cow position:
               
chr4:48485771-48486065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
500-810
               

               
Cow position:
               
chr4:30974107-30974412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
501-739
               

               
Cow position:
               
chr4:19744656-19744896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
125, 16
               

               
Conread position:
               
504-738
               

               
Cow position:
               
chr4:34924917-34924683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
106, 13
               

               
Conread position:
               
504-792
               

               
Cow position:
               
chr4:65179355-65179088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
242, 13
               

               
Conread position:
               
505-709
               

               
Cow position:
               
chr4:24810670-24810461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
505-738
               

               
Cow position:
               
chr4:10412155-10412389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
143, 12
               

               
Conread position:
               
505-740
               

               
Cow position:
               
chr4:53209012-53209246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
111, 12
               

               
Conread position:
               
505-782
               

               
Cow position:
               
chr4:38799418-38799150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
505-786
               

               
Cow position:
               
chr4:41441342-41441618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
104, 12
               

               
Conread position:
               
505-792
               

               
Cow position:
               
chr4:24002192-24001904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
505-793
               

               
Cow position:
               
chr4:26323510-26323802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
505-804
               

               
Cow position:
               
chr4:19142065-19142349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
127, 10
               

               
Conread position:
               
505-809
               

               
Cow position:
               
chr4:23847274-23846973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
123, 12
               

               
Conread position:
               
505-823
               

               
Cow position:
               
chr4:39231746-39231426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
505-883
               

               
Cow position:
               
chr4:23647066-23646701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
506-633
               

               
Cow position:
               
chr4:22072895-22072771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-646
               

               
Cow position:
               
chr4:56409959-56410100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
506-652
               

               
Cow position:
               
chr4:33062688-33062829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-670
               

               
Cow position:
               
chr4:41292202-41292042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-677
               

               
Cow position:
               
chr4:5610297-5610124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
506-683
               

               
Cow position:
               
chr4:55270983-55270805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
506-684
               

               
Cow position:
               
chr4:44072992-44072812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
142, 16
               

               
Conread position:
               
506-685
               

               
Cow position:
               
chr4:54667913-54667733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-692
               

               
Cow position:
               
chr4:56514161-56513982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-692
               

               
Cow position:
               
chr4:57555744-57555933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
506-701
               

               
Cow position:
               
chr4:22744099-22744292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
506-703
               

               
Cow position:
               
chr4:51083584-51083391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
506-729
               

               
Cow position:
               
chr4:11671230-11671450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-731
               

               
Cow position:
               
chr4:2141523-2141750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
506-738
               

               
Cow position:
               
chr4:22842126-22842348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
174, 11
               

               
Conread position:
               
506-738
               

               
Cow position:
               
chr4:33357709-33357943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-738
               

               
Cow position:
               
chr4:34310677-34310446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-738
               

               
Cow position:
               
chr4:36893131-36893366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
506-738
               

               
Cow position:
               
chr4:44025040-44024812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-739
               

               
Cow position:
               
chr4:56435583-56435812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
184, 15
               

               
Conread position:
               
506-740
               

               
Cow position:
               
chr4:19438236-19438474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
506-742
               

               
Cow position:
               
chr4:23060225-23059985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-742
               

               
Cow position:
               
chr4:48137687-48137923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
506-742
               

               
Cow position:
               
chr4:56233465-56233693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
182, 11
               

               
Conread position:
               
506-744
               

               
Cow position:
               
chr4:27292181-27291941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
136, 11
               

               
Conread position:
               
506-755
               

               
Cow position:
               
chr4:11897521-11897271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-755
               

               
Cow position:
               
chr4:13271926-13272167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
221, 9
               

               
Conread position:
               
506-755
               

               
Cow position:
               
chr4:47289848-47290102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-756
               

               
Cow position:
               
chr4:4321228-4320977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
115, 11
               

               
Conread position:
               
506-757
               

               
Cow position:
               
chr4:13832824-13832582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
189, 46
               

               
Conread position:
               
506-761
               

               
Cow position:
               
chr4:24458320-24458073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
184, 11
               

               
Conread position:
               
506-761
               

               
Cow position:
               
chr4:31023219-31023482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
506-769
               

               
Cow position:
               
chr4:63965213-63964950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
506-786
               

               
Cow position:
               
chr4:9444912-9444633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
84, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr4:19597537-19597267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr4:21531863-21531587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr4:25806677-25806956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr4:33612585-33612302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr4:59785095-59785379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 11
               

               
Conread position:
               
506-790
               

               
Cow position:
               
chr4:4672557-4672277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
506-791
               

               
Cow position:
               
chr4:46591437-46591727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr4:3687706-3687983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr4:3837057-3837335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
191, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr4:3850330-3850612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
141, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr4:14470793-14470509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr4:23509366-23509654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr4:23599948-23600228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr4:27529891-27530179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr4:32726000-32726285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr4:35981767-35982060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-793
               

               
Cow position:
               
chr4:19265350-19265635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
106, 11
               

               
Conread position:
               
506-793
               

               
Cow position:
               
chr4:27664783-27665075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-793
               

               
Cow position:
               
chr4:42672949-42673238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-793
               

               
Cow position:
               
chr4:43148181-43148473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-793
               

               
Cow position:
               
chr4:44782152-44782436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
120, 11
               

               
Conread position:
               
506-793
               

               
Cow position:
               
chr4:51903380-51903667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
506-799
               

               
Cow position:
               
chr4:9815574-9815279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
141, 11
               

               
Conread position:
               
506-803
               

               
Cow position:
               
chr4:17112099-17111802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
151, 16
               

               
Conread position:
               
506-805
               

               
Cow position:
               
chr4:4185899-4186193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
506-805
               

               
Cow position:
               
chr4:19322301-19322004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
506-808
               

               
Cow position:
               
chr4:19097069-19097364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
506-808
               

               
Cow position:
               
chr4:48961712-48961409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr4:4319373-4319074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
136, 94
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr4:7571187-7571491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr4:7808360-7808649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
231, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr4:21257351-21257047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr4:56240067-56239782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 11
               

               
Conread position:
               
506-810
               

               
Cow position:
               
chr4:45644534-45644239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-812
               

               
Cow position:
               
chr4:11193960-11194266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 16
               

               
Conread position:
               
506-817
               

               
Cow position:
               
chr4:620376-620049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
506-818
               

               
Cow position:
               
chr4:53100583-53100888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
181, 11
               

               
Conread position:
               
506-823
               

               
Cow position:
               
chr4:13693900-13693579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
506-824
               

               
Cow position:
               
chr4:25356528-25356229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
506-826
               

               
Cow position:
               
chr4:62772156-62771823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
506-836
               

               
Cow position:
               
chr4:62471846-62472180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
506-839
               

               
Cow position:
               
chr4:42922068-42921750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
109, 11
               

               
Conread position:
               
506-845
               

               
Cow position:
               
chr4:24744635-24744292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
506-852
               

               
Cow position:
               
chr4:13255871-13256204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
506-859
               

               
Cow position:
               
chr4:25889055-25888699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
111, 16
               

               
Conread position:
               
506-865
               

               
Cow position:
               
chr4:12464624-12464983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
221, 9
               

               
Conread position:
               
506-879
               

               
Cow position:
               
chr4:19435038-19435412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-883
               

               
Cow position:
               
chr4:12049021-12049393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
506-883
               

               
Cow position:
               
chr4:54937664-54938049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
507-718
               

               
Cow position:
               
chr4:11901784-11901574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
103, 10
               

               
Conread position:
               
509-761
               

               
Cow position:
               
chr4:11201598-11201850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 13
               

               
Conread position:
               
509-792
               

               
Cow position:
               
chr4:16602271-16602002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
119, 13
               

               
Conread position:
               
509-809
               

               
Cow position:
               
chr4:38952339-38952631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
509-880
               

               
Cow position:
               
chr4:275241-275607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
136, 12
               

               
Conread position:
               
513-788
               

               
Cow position:
               
chr4:23445270-23444989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
515-761
               

               
Cow position:
               
chr4:19497465-19497233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
515-761
               

               
Cow position:
               
chr4:52748673-52748424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
114, 41
               

               
Conread position:
               
515-788
               

               
Cow position:
               
chr4:5461075-5460804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
95, 40
               

               
Conread position:
               
515-790
               

               
Cow position:
               
chr4:25197713-25197436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
515-792
               

               
Cow position:
               
chr4:11872127-11871861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
134, 119
               

               
Conread position:
               
515-792
               

               
Cow position:
               
chr4:36755535-36755801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
115, 67
               

               
Conread position:
               
515-809
               

               
Cow position:
               
chr4:36730975-36731268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
114, 174
               

               
Conread position:
               
515-809
               

               
Cow position:
               
chr4:65919402-65919686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 48
               

               
Conread position:
               
515-865
               

               
Cow position:
               
chr4:20327930-20327572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
515-884
               

               
Cow position:
               
chr4:2602015-2602395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
95, 65
               

               
Conread position:
               
516-739
               

               
Cow position:
               
chr4:65826069-65825836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
113, 169
               

               
Conread position:
               
516-788
               

               
Cow position:
               
chr4:66173012-66172739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
120, 29
               

               
Conread position:
               
516-809
               

               
Cow position:
               
chr4:51783967-51784257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
113, 46
               

               
Conread position:
               
517-793
               

               
Cow position:
               
chr4:31859048-31859326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
93, 131
               

               
Conread position:
               
517-809
               

               
Cow position:
               
chr4:47348618-47348904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
140, 46
               

               
Conread position:
               
517-822
               

               
Cow position:
               
chr4:37915544-37915245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
125, 28
               

               
Conread position:
               
518-646
               

               
Cow position:
               
chr4:43750024-43749896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
518-648
               

               
Cow position:
               
chr4:16091612-16091485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
102, 62
               

               
Conread position:
               
518-705
               

               
Cow position:
               
chr4:36841067-36841258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
117, 133
               

               
Conread position:
               
518-720
               

               
Cow position:
               
chr4:21058598-21058387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
92, 114
               

               
Conread position:
               
518-730
               

               
Cow position:
               
chr4:37553256-37553040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
93, 137
               

               
Conread position:
               
518-731
               

               
Cow position:
               
chr4:41908004-41907801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
172, 49
               

               
Conread position:
               
518-733
               

               
Cow position:
               
chr4:18576988-18576768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
119, 56
               

               
Conread position:
               
518-738
               

               
Cow position:
               
chr4:480219-480001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
111, 47
               

               
Conread position:
               
518-738
               

               
Cow position:
               
chr4:22215868-22215646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
124, 163
               

               
Conread position:
               
518-738
               

               
Cow position:
               
chr4:37620100-37619881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
91, 47
               

               
Conread position:
               
518-740
               

               
Cow position:
               
chr4:2422370-2422585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
117, 61
               

               
Conread position:
               
518-755
               

               
Cow position:
               
chr4:19463279-19463520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
110, 133
               

               
Conread position:
               
518-760
               

               
Cow position:
               
chr4:48152580-48152342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
518-761
               

               
Cow position:
               
chr4:41867232-41867473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
173, 49
               

               
Conread position:
               
518-770
               

               
Cow position:
               
chr4:20299058-20299314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 85
               

               
Conread position:
               
518-770
               

               
Cow position:
               
chr4:66112289-66112032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
518-787
               

               
Cow position:
               
chr4:51850984-51851262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
39, 139
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr4:637785-638057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
93, 136
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr4:22138448-22138164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr4:23451308-23451037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr4:31506242-31505967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
111, 15
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr4:35940224-35939949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 193
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr4:51898791-51899063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
124, 210
               

               
Conread position:
               
518-790
               

               
Cow position:
               
chr4:63096287-63096015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
130, 10
               

               
Conread position:
               
518-792
               

               
Cow position:
               
chr4:46550172-46550441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
188, 111
               

               
Conread position:
               
518-792
               

               
Cow position:
               
chr4:47730650-47730919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
118, 38
               

               
Conread position:
               
518-792
               

               
Cow position:
               
chr4:54455556-54455282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
121, 54
               

               
Conread position:
               
518-792
               

               
Cow position:
               
chr4:58881179-58880900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
518-793
               

               
Cow position:
               
chr4:15904886-15905164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
111, 47
               

               
Conread position:
               
518-794
               

               
Cow position:
               
chr4:16799405-16799123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
518-794
               

               
Cow position:
               
chr4:46477151-46476883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
165, 97
               

               
Conread position:
               
518-794
               

               
Cow position:
               
chr4:59277692-59277417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
249, 0
               

               
Conread position:
               
518-800
               

               
Cow position:
               
chr4:38935146-38935428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 55
               

               
Conread position:
               
518-804
               

               
Cow position:
               
chr4:29291310-29291587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr4:19699888-19700173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
28, 171
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr4:25879183-25879468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 38
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr4:26659093-26659378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
147, 10
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr4:31136543-31136833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr4:45738696-45738397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr4:56570592-56570884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
92, 68
               

               
Conread position:
               
518-817
               

               
Cow position:
               
chr4:12903606-12903907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
130, 6
               

               
Conread position:
               
518-822
               

               
Cow position:
               
chr4:37704053-37704356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
518-838
               

               
Cow position:
               
chr4:27540409-27540727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
170, 53
               

               
Conread position:
               
518-858
               

               
Cow position:
               
chr4:4084658-4084314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
130, 47
               

               
Conread position:
               
518-878
               

               
Cow position:
               
chr4:61897751-61897388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
118, 40
               

               
Conread position:
               
518-879
               

               
Cow position:
               
chr4:21064826-21065187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
129, 47
               

               
Conread position:
               
518-880
               

               
Cow position:
               
chr4:42424014-42423642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
163, 103
               

               
Conread position:
               
518-883
               

               
Cow position:
               
chr4:7430106-7430476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
32, 117
               

               
Conread position:
               
518-883
               

               
Cow position:
               
chr4:10732006-10732389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 134
               

               
Conread position:
               
518-883
               

               
Cow position:
               
chr4:40414843-40414459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
519-684
               

               
Cow position:
               
chr4:49212932-49212760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 101
               

               
Conread position:
               
519-738
               

               
Cow position:
               
chr4:27687712-27687934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
89, 37
               

               
Conread position:
               
519-740
               

               
Cow position:
               
chr4:14964566-14964787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 93
               

               
Conread position:
               
519-757
               

               
Cow position:
               
chr4:5999408-5999164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
519-787
               

               
Cow position:
               
chr4:68233767-68234028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
203, 53
               

               
Conread position:
               
519-793
               

               
Cow position:
               
chr4:9137063-9137341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
95, 74
               

               
Conread position:
               
519-809
               

               
Cow position:
               
chr4:37935492-37935207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
110, 48
               

               
Conread position:
               
519-809
               

               
Cow position:
               
chr4:63459427-63459145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
116, 167
               

               
Conread position:
               
520-694
               

               
Cow position:
               
chr4:23655785-23655956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
166, 117
               

               
Conread position:
               
520-761
               

               
Cow position:
               
chr4:58834616-58834373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
520-793
               

               
Cow position:
               
chr4:28836316-28836598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
520-883
               

               
Cow position:
               
chr4:3283659-3283285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
21, 63
               

               
Conread position:
               
521-627
               

               
Cow position:
               
chr4:46385787-46385679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
521-665
               

               
Cow position:
               
chr4:62567197-62567346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
89, 134
               

               
Conread position:
               
521-709
               

               
Cow position:
               
chr4:359632-359821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
89, 134
               

               
Conread position:
               
521-714
               

               
Cow position:
               
chr4:6034300-6034105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
90, 134
               

               
Conread position:
               
521-720
               

               
Cow position:
               
chr4:29035705-29035901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
127, 157
               

               
Conread position:
               
521-733
               

               
Cow position:
               
chr4:561191-561403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 127
               

               
Conread position:
               
521-782
               

               
Cow position:
               
chr4:44956399-44956131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
90, 134
               

               
Conread position:
               
521-793
               

               
Cow position:
               
chr4:13327167-13326893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
89, 196
               

               
Conread position:
               
521-812
               

               
Cow position:
               
chr4:41602639-41602930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
521-824
               

               
Cow position:
               
chr4:65824196-65824503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 137
               

               
Conread position:
               
521-859
               

               
Cow position:
               
chr4:36929104-36929440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
127, 188
               

               
Conread position:
               
521-865
               

               
Cow position:
               
chr4:68387582-68387938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
127, 46
               

               
Conread position:
               
522-792
               

               
Cow position:
               
chr4:34337478-34337211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
162, 50
               

               
Conread position:
               
522-883
               

               
Cow position:
               
chr4:28839418-28839779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 6
               

               
Conread position:
               
523-704
               

               
Cow position:
               
chr4:10136329-10136509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
88, 154
               

               
Conread position:
               
523-791
               

               
Cow position:
               
chr4:1026436-1026177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
524-697
               

               
Cow position:
               
chr4:61391414-61391238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
121, 152
               

               
Conread position:
               
524-780
               

               
Cow position:
               
chr4:46383580-46383321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
524-792
               

               
Cow position:
               
chr4:38944471-38944197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
100, 130
               

               
Conread position:
               
524-809
               

               
Cow position:
               
chr4:51768906-51769181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
86, 43
               

               
Conread position:
               
527-809
               

               
Cow position:
               
chr4:16593879-16594160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
6, 41
               

               
Conread position:
               
528-754
               

               
Cow position:
               
chr4:62983756-62983530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
530-740
               

               
Cow position:
               
chr4:37470350-37470561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
118, 42
               

               
Conread position:
               
530-787
               

               
Cow position:
               
chr4:13344341-13344594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
530-793
               

               
Cow position:
               
chr4:29106699-29106969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
531-795
               

               
Cow position:
               
chr4:11331890-11332161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
531-883
               

               
Cow position:
               
chr4:68805828-68806172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
283, 52
               

               
Conread position:
               
532-822
               

               
Cow position:
               
chr4:21392011-21391721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
532-865
               

               
Cow position:
               
chr4:54111545-54111871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
126, 167
               

               
Conread position:
               
533-770
               

               
Cow position:
               
chr4:3689511-3689743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
177, 18
               

               
Conread position:
               
533-788
               

               
Cow position:
               
chr4:65175341-65175088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 124
               

               
Conread position:
               
533-849
               

               
Cow position:
               
chr4:17774547-17774226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
95, 7
               

               
Conread position:
               
540-809
               

               
Cow position:
               
chr4:51727882-51728157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
103, 89
               

               
Conread position:
               
548-865
               

               
Cow position:
               
chr4:53208109-53208433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
80, 68
               

               
Conread position:
               
550-814
               

               
Cow position:
               
chr4:21233058-21232791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
78, 101
               

               
Conread position:
               
551-859
               

               
Cow position:
               
chr4:33097159-33096841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
98, 78
               

               
Conread position:
               
552-809
               

               
Cow position:
               
chr4:17186535-17186273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 174
               

               
Conread position:
               
553-809
               

               
Cow position:
               
chr4:33433445-33433178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
556-788
               

               
Cow position:
               
chr4:3421449-3421679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
129, 83
               

               
Conread position:
               
556-809
               

               
Cow position:
               
chr4:34022765-34022507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
72, 95
               

               
Conread position:
               
560-704
               

               
Cow position:
               
chr4:54479078-54478935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
88, 79
               

               
Conread position:
               
564-792
               

               
Cow position:
               
chr4:54190920-54191150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
64, 17
               

               
Conread position:
               
564-809
               

               
Cow position:
               
chr4:59377743-59377987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 100
               

               
Conread position:
               
567-792
               

               
Cow position:
               
chr4:10378941-10379171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
567-821
               

               
Cow position:
               
chr4:8947226-8947484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
69, 96
               

               
Conread position:
               
569-792
               

               
Cow position:
               
chr4:19501249-19501031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
574-820
               

               
Cow position:
               
chr4:36290468-36290713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
74, 116
               

               
Conread position:
               
583-749
               

               
Cow position:
               
chr4:47047742-47047913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
583-819
               

               
Cow position:
               
chr4:54927591-54927353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
62, 230
               

               
Conread position:
               
585-879
               

               
Cow position:
               
chr4:48409415-48409123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
52, 65
               

               
Conread position:
               
590-809
               

               
Cow position:
               
chr4:19118862-19119095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
596-791
               

               
Cow position:
               
chr4:25537407-25537608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
596-800
               

               
Cow position:
               
chr4:21874036-21874244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
599-822
               

               
Cow position:
               
chr4:52832153-52831926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
659-795
               

               
Cow position:
               
chr4:19323901-19324038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               
Show alignments to all cow chromosomes.