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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8034M07.5
        

               
Conread position:
               
500-632
               

               
Cow position:
               
chr7:35300727-35300600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
500-646
               

               
Cow position:
               
chr7:35792937-35793077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
500-671
               

               
Cow position:
               
chr7:32240453-32240619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
130, 17
               

               
Conread position:
               
500-695
               

               
Cow position:
               
chr7:61129040-61129237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
128, 20
               

               
Conread position:
               
500-697
               

               
Cow position:
               
chr7:38696668-38696864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
500-742
               

               
Cow position:
               
chr7:46148686-46148919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
195, 7
               

               
Conread position:
               
500-770
               

               
Cow position:
               
chr7:47775688-47775949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
500-793
               

               
Cow position:
               
chr7:34428381-34428687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
500-809
               

               
Cow position:
               
chr7:26631991-26631685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
500-809
               

               
Cow position:
               
chr7:27079450-27079754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
148, 17
               

               
Conread position:
               
500-883
               

               
Cow position:
               
chr7:36996198-36996577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
500-883
               

               
Cow position:
               
chr7:40566894-40567275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
501-698
               

               
Cow position:
               
chr7:11422461-11422654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
501-793
               

               
Cow position:
               
chr7:44496742-44496460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
131, 16
               

               
Conread position:
               
502-880
               

               
Cow position:
               
chr7:46818675-46818285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
504-792
               

               
Cow position:
               
chr7:47513866-47513575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
505-740
               

               
Cow position:
               
chr7:52294958-52295186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
127, 12
               

               
Conread position:
               
505-774
               

               
Cow position:
               
chr7:49942600-49942334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
505-788
               

               
Cow position:
               
chr7:57911434-57911717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
106, 10
               

               
Conread position:
               
505-788
               

               
Cow position:
               
chr7:64135638-64135361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 9
               

               
Conread position:
               
505-792
               

               
Cow position:
               
chr7:48406674-48406383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
105, 12
               

               
Conread position:
               
505-792
               

               
Cow position:
               
chr7:63749653-63749366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
505-792
               

               
Cow position:
               
chr7:68170774-68170490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 10
               

               
Conread position:
               
505-818
               

               
Cow position:
               
chr7:62793609-62793933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
505-883
               

               
Cow position:
               
chr7:31171126-31170740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
137, 9
               

               
Conread position:
               
506-625
               

               
Cow position:
               
chr7:48695625-48695742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-633
               

               
Cow position:
               
chr7:46928812-46928937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-643
               

               
Cow position:
               
chr7:46116824-46116690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
116, 11
               

               
Conread position:
               
506-648
               

               
Cow position:
               
chr7:21315936-21316074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
506-677
               

               
Cow position:
               
chr7:11160174-11160007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-687
               

               
Cow position:
               
chr7:12408412-12408229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-687
               

               
Cow position:
               
chr7:12994986-12995166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
506-690
               

               
Cow position:
               
chr7:8785793-8785973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
506-691
               

               
Cow position:
               
chr7:28324462-28324647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-702
               

               
Cow position:
               
chr7:23619258-23619062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
506-704
               

               
Cow position:
               
chr7:34716074-34716268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
506-711
               

               
Cow position:
               
chr7:26012251-26012455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
175, 11
               

               
Conread position:
               
506-718
               

               
Cow position:
               
chr7:34569027-34569225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-720
               

               
Cow position:
               
chr7:7142239-7142020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-720
               

               
Cow position:
               
chr7:56886957-56886746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
130, 11
               

               
Conread position:
               
506-734
               

               
Cow position:
               
chr7:39529173-39528939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-737
               

               
Cow position:
               
chr7:54013184-54013425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 11
               

               
Conread position:
               
506-738
               

               
Cow position:
               
chr7:32372686-32372917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
124, 16
               

               
Conread position:
               
506-738
               

               
Cow position:
               
chr7:44095116-44094878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
506-742
               

               
Cow position:
               
chr7:54090030-54090269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-754
               

               
Cow position:
               
chr7:42431651-42431903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-755
               

               
Cow position:
               
chr7:22357662-22357409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
506-760
               

               
Cow position:
               
chr7:28584076-28584325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-761
               

               
Cow position:
               
chr7:51319623-51319878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-770
               

               
Cow position:
               
chr7:41872264-41872012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
156, 11
               

               
Conread position:
               
506-770
               

               
Cow position:
               
chr7:56820744-56820494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-773
               

               
Cow position:
               
chr7:30307573-30307834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
186, 11
               

               
Conread position:
               
506-784
               

               
Cow position:
               
chr7:10122537-10122801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
270, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr7:2923469-2923754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
143, 14
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr7:20176883-20176602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
70, 11
               

               
Conread position:
               
506-788
               

               
Cow position:
               
chr7:40121293-40121578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
506-789
               

               
Cow position:
               
chr7:14766313-14766020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
116, 9
               

               
Conread position:
               
506-791
               

               
Cow position:
               
chr7:17756866-17757142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
506-791
               

               
Cow position:
               
chr7:20537189-20537476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr7:20229-20519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
106, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr7:17967291-17967016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
185, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr7:18508703-18508431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
137, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr7:34422435-34422161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr7:35893238-35893527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
123, 239
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr7:36533859-36534134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
234, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr7:41328211-41327924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
506-792
               

               
Cow position:
               
chr7:52383146-52382869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
194, 11
               

               
Conread position:
               
506-793
               

               
Cow position:
               
chr7:14076443-14076171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-793
               

               
Cow position:
               
chr7:34223511-34223805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
506-793
               

               
Cow position:
               
chr7:39154935-39155225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
506-793
               

               
Cow position:
               
chr7:39167292-39167574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-793
               

               
Cow position:
               
chr7:47547221-47547520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
506-793
               

               
Cow position:
               
chr7:59691900-59692184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
109, 11
               

               
Conread position:
               
506-799
               

               
Cow position:
               
chr7:4864209-4863931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
109, 9
               

               
Conread position:
               
506-799
               

               
Cow position:
               
chr7:37568857-37569166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
87, 11
               

               
Conread position:
               
506-799
               

               
Cow position:
               
chr7:58302117-58301822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
506-806
               

               
Cow position:
               
chr7:11011865-11011560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
104, 11
               

               
Conread position:
               
506-808
               

               
Cow position:
               
chr7:54712242-54712547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr7:3283187-3283486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr7:3311667-3311966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr7:4720407-4720104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr7:6057958-6058255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
175, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr7:17816581-17816876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr7:23646430-23646738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr7:23935937-23936238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr7:27509544-27509842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr7:32894425-32894121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
116, 142
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr7:32914938-32915242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr7:37142537-37142246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr7:39415732-39416037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr7:43711046-43711341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr7:49106375-49106074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
506-809
               

               
Cow position:
               
chr7:50859836-50860134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
187, 11
               

               
Conread position:
               
506-810
               

               
Cow position:
               
chr7:28563555-28563262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 9
               

               
Conread position:
               
506-812
               

               
Cow position:
               
chr7:40406490-40406779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
506-820
               

               
Cow position:
               
chr7:10512885-10512575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
142, 11
               

               
Conread position:
               
506-820
               

               
Cow position:
               
chr7:62733007-62733318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
506-840
               

               
Cow position:
               
chr7:40953035-40952701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
139, 10
               

               
Conread position:
               
506-859
               

               
Cow position:
               
chr7:40321313-40321675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
506-865
               

               
Cow position:
               
chr7:40263825-40263472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
506-879
               

               
Cow position:
               
chr7:22793174-22793547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
506-882
               

               
Cow position:
               
chr7:29300932-29300561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 11
               

               
Conread position:
               
506-883
               

               
Cow position:
               
chr7:11714600-11714223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
506-883
               

               
Cow position:
               
chr7:43908035-43908414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
135, 11
               

               
Conread position:
               
506-883
               

               
Cow position:
               
chr7:48667254-48667622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
178, 16
               

               
Conread position:
               
506-883
               

               
Cow position:
               
chr7:51909960-51910334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
508-610
               

               
Cow position:
               
chr7:9450063-9449963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
508-788
               

               
Cow position:
               
chr7:20220010-20219734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
140, 9
               

               
Conread position:
               
509-709
               

               
Cow position:
               
chr7:66335929-66335733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
138, 9
               

               
Conread position:
               
509-879
               

               
Cow position:
               
chr7:29509784-29510146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
285, 11
               

               
Conread position:
               
510-792
               

               
Cow position:
               
chr7:20168382-20168660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
510-809
               

               
Cow position:
               
chr7:30276564-30276862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
118, 7
               

               
Conread position:
               
513-761
               

               
Cow position:
               
chr7:62193394-62193646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
7, 227
               

               
Conread position:
               
515-685
               

               
Cow position:
               
chr7:63085396-63085563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
95, 47
               

               
Conread position:
               
515-721
               

               
Cow position:
               
chr7:35111406-35111606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
172, 120
               

               
Conread position:
               
515-740
               

               
Cow position:
               
chr7:15608244-15608464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
147, 97
               

               
Conread position:
               
515-761
               

               
Cow position:
               
chr7:37952013-37952258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 181
               

               
Conread position:
               
515-788
               

               
Cow position:
               
chr7:52784969-52784699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
114, 189
               

               
Conread position:
               
515-788
               

               
Cow position:
               
chr7:53698081-53697801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
515-788
               

               
Cow position:
               
chr7:57259195-57258917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
515-792
               

               
Cow position:
               
chr7:8977988-8977714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 163
               

               
Conread position:
               
515-792
               

               
Cow position:
               
chr7:36665165-36665435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
515-792
               

               
Cow position:
               
chr7:39451299-39451039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
185, 41
               

               
Conread position:
               
515-792
               

               
Cow position:
               
chr7:40067492-40067771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
95, 44
               

               
Conread position:
               
515-793
               

               
Cow position:
               
chr7:46823503-46823781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
95, 45
               

               
Conread position:
               
515-804
               

               
Cow position:
               
chr7:9978-10271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 22
               

               
Conread position:
               
515-804
               

               
Cow position:
               
chr7:3773436-3773144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 80
               

               
Conread position:
               
515-809
               

               
Cow position:
               
chr7:38081990-38082283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
517-741
               

               
Cow position:
               
chr7:53763749-53763527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 63
               

               
Conread position:
               
517-788
               

               
Cow position:
               
chr7:25195371-25195648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
93, 163
               

               
Conread position:
               
518-627
               

               
Cow position:
               
chr7:6800718-6800609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
518-638
               

               
Cow position:
               
chr7:40276542-40276422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
518-646
               

               
Cow position:
               
chr7:27136335-27136463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
518-690
               

               
Cow position:
               
chr7:29010553-29010387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
130, 30
               

               
Conread position:
               
518-691
               

               
Cow position:
               
chr7:25083529-25083702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 115
               

               
Conread position:
               
518-696
               

               
Cow position:
               
chr7:59646024-59645846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
131, 119
               

               
Conread position:
               
518-697
               

               
Cow position:
               
chr7:15654239-15654059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
92, 63
               

               
Conread position:
               
518-697
               

               
Cow position:
               
chr7:40571105-40571288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
518-708
               

               
Cow position:
               
chr7:147249-147437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 6
               

               
Conread position:
               
518-713
               

               
Cow position:
               
chr7:6745038-6745238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
518-718
               

               
Cow position:
               
chr7:66748686-66748487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
120, 34
               

               
Conread position:
               
518-720
               

               
Cow position:
               
chr7:39401792-39401997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
92, 186
               

               
Conread position:
               
518-729
               

               
Cow position:
               
chr7:58362784-58362997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
117, 202
               

               
Conread position:
               
518-733
               

               
Cow position:
               
chr7:37394154-37394361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
518-737
               

               
Cow position:
               
chr7:24718698-24718476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 135
               

               
Conread position:
               
518-737
               

               
Cow position:
               
chr7:48722068-48721844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
110, 57
               

               
Conread position:
               
518-737
               

               
Cow position:
               
chr7:61818100-61817880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
132, 34
               

               
Conread position:
               
518-739
               

               
Cow position:
               
chr7:64102572-64102353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
117, 111
               

               
Conread position:
               
518-740
               

               
Cow position:
               
chr7:4840645-4840871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
114, 176
               

               
Conread position:
               
518-741
               

               
Cow position:
               
chr7:40579338-40579556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
518-741
               

               
Cow position:
               
chr7:67850186-67850415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
518-742
               

               
Cow position:
               
chr7:11715541-11715775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
92, 134
               

               
Conread position:
               
518-742
               

               
Cow position:
               
chr7:12212769-12212539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
91, 157
               

               
Conread position:
               
518-754
               

               
Cow position:
               
chr7:32819649-32819891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
518-755
               

               
Cow position:
               
chr7:42429706-42429950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 114
               

               
Conread position:
               
518-761
               

               
Cow position:
               
chr7:15755612-15755367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
518-771
               

               
Cow position:
               
chr7:60483584-60483336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
130, 38
               

               
Conread position:
               
518-778
               

               
Cow position:
               
chr7:23131434-23131697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
123, 183
               

               
Conread position:
               
518-785
               

               
Cow position:
               
chr7:16022139-16022398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
119, 45
               

               
Conread position:
               
518-786
               

               
Cow position:
               
chr7:14542215-14541965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
130, 24
               

               
Conread position:
               
518-787
               

               
Cow position:
               
chr7:66894703-66894434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr7:249667-249399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr7:6706134-6706406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
97, 45
               

               
Conread position:
               
518-788
               

               
Cow position:
               
chr7:28916920-28917197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
79, 134
               

               
Conread position:
               
518-791
               

               
Cow position:
               
chr7:15569880-15570147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
117, 27
               

               
Conread position:
               
518-791
               

               
Cow position:
               
chr7:39325580-39325835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
518-792
               

               
Cow position:
               
chr7:9193406-9193127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
92, 37
               

               
Conread position:
               
518-792
               

               
Cow position:
               
chr7:23568903-23568626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
125, 111
               

               
Conread position:
               
518-792
               

               
Cow position:
               
chr7:34433443-34433171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
14, 48
               

               
Conread position:
               
518-792
               

               
Cow position:
               
chr7:64364691-64364418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
117, 28
               

               
Conread position:
               
518-793
               

               
Cow position:
               
chr7:14005708-14005992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 114
               

               
Conread position:
               
518-793
               

               
Cow position:
               
chr7:30156121-30155837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
518-793
               

               
Cow position:
               
chr7:40008655-40008940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
518-793
               

               
Cow position:
               
chr7:53552108-53551829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
92, 114
               

               
Conread position:
               
518-793
               

               
Cow position:
               
chr7:64229059-64228781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 46
               

               
Conread position:
               
518-793
               

               
Cow position:
               
chr7:64269149-64268883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
518-794
               

               
Cow position:
               
chr7:43894661-43894941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
92, 166
               

               
Conread position:
               
518-795
               

               
Cow position:
               
chr7:35275239-35274967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
130, 6
               

               
Conread position:
               
518-797
               

               
Cow position:
               
chr7:25023623-25023348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
130, 184
               

               
Conread position:
               
518-797
               

               
Cow position:
               
chr7:68050935-68051215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr7:4452437-4452731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
123, 260
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr7:20534710-20534999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 76
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr7:41315601-41315309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
108, 242
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr7:48714685-48714981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr7:50066275-50065989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 47
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr7:50095218-50095514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr7:53053569-53053276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 133
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr7:59168115-59168392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
518-809
               

               
Cow position:
               
chr7:61824019-61823723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
71, 45
               

               
Conread position:
               
518-822
               

               
Cow position:
               
chr7:36278132-36278438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
142, 71
               

               
Conread position:
               
518-822
               

               
Cow position:
               
chr7:46857123-46856823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
145, 68
               

               
Conread position:
               
518-830
               

               
Cow position:
               
chr7:10943716-10943411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
173, 108
               

               
Conread position:
               
518-833
               

               
Cow position:
               
chr7:23456979-23456670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
176, 38
               

               
Conread position:
               
518-865
               

               
Cow position:
               
chr7:29479359-29479721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
124, 197
               

               
Conread position:
               
518-879
               

               
Cow position:
               
chr7:23679758-23679380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
110, 133
               

               
Conread position:
               
518-879
               

               
Cow position:
               
chr7:56838661-56838311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
248, 119
               

               
Conread position:
               
519-697
               

               
Cow position:
               
chr7:12659159-12658978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
68, 174
               

               
Conread position:
               
519-740
               

               
Cow position:
               
chr7:13928316-13928094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
141, 45
               

               
Conread position:
               
519-788
               

               
Cow position:
               
chr7:8777037-8777314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
519-799
               

               
Cow position:
               
chr7:38060595-38060309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
519-809
               

               
Cow position:
               
chr7:27283517-27283801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
110, 168
               

               
Conread position:
               
519-809
               

               
Cow position:
               
chr7:33393150-33393436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 66
               

               
Conread position:
               
519-809
               

               
Cow position:
               
chr7:42244855-42244574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
126, 46
               

               
Conread position:
               
519-859
               

               
Cow position:
               
chr7:46106048-46105709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
520-700
               

               
Cow position:
               
chr7:6820727-6820919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
520-733
               

               
Cow position:
               
chr7:39518140-39518346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
100, 44
               

               
Conread position:
               
520-791
               

               
Cow position:
               
chr7:33989800-33990062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
86, 35
               

               
Conread position:
               
520-792
               

               
Cow position:
               
chr7:26737500-26737236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
44, 38
               

               
Conread position:
               
520-793
               

               
Cow position:
               
chr7:1375533-1375805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
520-793
               

               
Cow position:
               
chr7:39939576-39939847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
520-809
               

               
Cow position:
               
chr7:36569686-36569990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
520-809
               

               
Cow position:
               
chr7:61790516-61790225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
96, 39
               

               
Conread position:
               
520-835
               

               
Cow position:
               
chr7:49750969-49751273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
128, 40
               

               
Conread position:
               
521-699
               

               
Cow position:
               
chr7:20968274-20968450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
171, 34
               

               
Conread position:
               
521-703
               

               
Cow position:
               
chr7:27360922-27361107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 134
               

               
Conread position:
               
521-741
               

               
Cow position:
               
chr7:52680679-52680904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
521-741
               

               
Cow position:
               
chr7:66179959-66179731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
521-780
               

               
Cow position:
               
chr7:23205789-23205531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
116, 46
               

               
Conread position:
               
521-782
               

               
Cow position:
               
chr7:40051919-40051659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
126, 140
               

               
Conread position:
               
521-788
               

               
Cow position:
               
chr7:1321058-1320793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
198, 98
               

               
Conread position:
               
521-788
               

               
Cow position:
               
chr7:4582895-4582622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 187
               

               
Conread position:
               
521-790
               

               
Cow position:
               
chr7:33626758-33626490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
90, 177
               

               
Conread position:
               
521-792
               

               
Cow position:
               
chr7:45955766-45956039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 185
               

               
Conread position:
               
521-793
               

               
Cow position:
               
chr7:8877719-8877991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
92, 46
               

               
Conread position:
               
521-793
               

               
Cow position:
               
chr7:40510475-40510754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
90, 119
               

               
Conread position:
               
521-879
               

               
Cow position:
               
chr7:4764681-4765051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
522-691
               

               
Cow position:
               
chr7:15547894-15548054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 108
               

               
Conread position:
               
522-809
               

               
Cow position:
               
chr7:48243516-48243799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
106, 30
               

               
Conread position:
               
522-883
               

               
Cow position:
               
chr7:53786121-53785770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
249, 104
               

               
Conread position:
               
523-674
               

               
Cow position:
               
chr7:10448942-10448787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
523-709
               

               
Cow position:
               
chr7:40324232-40324422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 131
               

               
Conread position:
               
523-752
               

               
Cow position:
               
chr7:5914045-5914268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
523-809
               

               
Cow position:
               
chr7:55688355-55688068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
105, 43
               

               
Conread position:
               
523-879
               

               
Cow position:
               
chr7:3336709-3336349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
112, 44
               

               
Conread position:
               
524-809
               

               
Cow position:
               
chr7:45331388-45331665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
227, 110
               

               
Conread position:
               
525-778
               

               
Cow position:
               
chr7:24991120-24991364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
250, 71
               

               
Conread position:
               
528-809
               

               
Cow position:
               
chr7:30816439-30816165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
107, 46
               

               
Conread position:
               
530-725
               

               
Cow position:
               
chr7:36714785-36714585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
533-793
               

               
Cow position:
               
chr7:9781880-9781613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 174
               

               
Conread position:
               
534-880
               

               
Cow position:
               
chr7:18544526-18544177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
260, 95
               

               
Conread position:
               
536-809
               

               
Cow position:
               
chr7:31094497-31094221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
96, 69
               

               
Conread position:
               
540-809
               

               
Cow position:
               
chr7:4129925-4129653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
545-793
               

               
Cow position:
               
chr7:21166387-21166131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 109
               

               
Conread position:
               
547-788
               

               
Cow position:
               
chr7:25960326-25960572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
65, 156
               

               
Conread position:
               
547-810
               

               
Cow position:
               
chr7:55085518-55085784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 145
               

               
Conread position:
               
548-799
               

               
Cow position:
               
chr7:40074544-40074801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
552-799
               

               
Cow position:
               
chr7:8272526-8272779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
21, 100
               

               
Conread position:
               
552-806
               

               
Cow position:
               
chr7:34412407-34412154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
64, 147
               

               
Conread position:
               
552-809
               

               
Cow position:
               
chr7:17713605-17713344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
84, 77
               

               
Conread position:
               
552-840
               

               
Cow position:
               
chr7:23761823-23762138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
556-794
               

               
Cow position:
               
chr7:3256482-3256233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
73, 95
               

               
Conread position:
               
556-809
               

               
Cow position:
               
chr7:6041851-6042099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
109, 11
               

               
Conread position:
               
556-864
               

               
Cow position:
               
chr7:14174543-14174241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
81, 139
               

               
Conread position:
               
556-876
               

               
Cow position:
               
chr7:18188350-18188025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
139, 73
               

               
Conread position:
               
557-788
               

               
Cow position:
               
chr7:9136706-9136944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
557-822
               

               
Cow position:
               
chr7:38263542-38263808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
48, 96
               

               
Conread position:
               
561-792
               

               
Cow position:
               
chr7:23636584-23636813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
68, 51
               

               
Conread position:
               
561-809
               

               
Cow position:
               
chr7:49903652-49903899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
138, 76
               

               
Conread position:
               
563-737
               

               
Cow position:
               
chr7:11958552-11958381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 63
               

               
Conread position:
               
564-785
               

               
Cow position:
               
chr7:51644540-51644754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
565-799
               

               
Cow position:
               
chr7:24220550-24220785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 65
               

               
Conread position:
               
567-755
               

               
Cow position:
               
chr7:39988285-39988479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
571-809
               

               
Cow position:
               
chr7:25496620-25496851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
572-775
               

               
Cow position:
               
chr7:14353902-14353695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
77, 67
               

               
Conread position:
               
574-809
               

               
Cow position:
               
chr7:28544065-28544304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 55
               

               
Conread position:
               
574-818
               

               
Cow position:
               
chr7:32945963-32946204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
575-822
               

               
Cow position:
               
chr7:5199660-5199411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
577-871
               

               
Cow position:
               
chr7:42636873-42637172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 128
               

               
Conread position:
               
601-822
               

               
Cow position:
               
chr7:8658430-8658656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
604-800
               

               
Cow position:
               
chr7:35300500-35300299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
44, 106
               

               
Conread position:
               
609-809
               

               
Cow position:
               
chr7:60732715-60732511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 160
               

               
Conread position:
               
635-840
               

               
Cow position:
               
chr7:56886554-56886348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
174, 13
               

               
Conread position:
               
640-809
               

               
Cow position:
               
chr7:26263700-26263524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               
Show alignments to all cow chromosomes.