Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8035D02.3.5
        

               Conread position:
               1-217
               

               Cow position:
               chr1:38426841-38426626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               213-372
               

               Cow position:
               chr1:38408860-38408701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               144
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               369-1043
               

               Cow position:
               chr1:38406869-38406195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               675
               

               Alignm identity:
               597
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1040-1235
               

               Cow position:
               chr1:38404810-38404617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               1218-1334
               

               Cow position:
               chr1:38402847-38402731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1331-1918
               

               Cow position:
               chr1:38377374-38376781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               603
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 289
               

               Conread position:
               2719-2889
               

               Cow position:
               chr1:38376264-38376087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               115, 0
               
Show alignments to all cow chromosomes.