Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8035E06.3
        

               Conread position:
               118-250
               

               Cow position:
               chr24:19782506-19782639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               131-304
               

               Cow position:
               chr24:32083881-32083700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 54
               

               Conread position:
               132-245
               

               Cow position:
               chr24:31186349-31186462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               133-250
               

               Cow position:
               chr24:16564040-16564158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               135-306
               

               Cow position:
               chr24:6415907-6416085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               138-308
               

               Cow position:
               chr24:43882929-43883099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               95, 165
               

               Conread position:
               148-303
               

               Cow position:
               chr24:37434471-37434308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               149-282
               

               Cow position:
               chr24:38819097-38819235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               150-295
               

               Cow position:
               chr24:17412175-17412328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               96, 0
               
Show alignments to all cow chromosomes.