Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8035E06.3 |
| Conread position: | 120-250 |
| Cow position: | chrX:23237771-23237900 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 132-250 |
| Cow position: | chrX:23193127-23193009 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 133-250 |
| Cow position: | chrX:833370-833253 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 133-250 |
| Cow position: | chrX:10583450-10583332 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 133-250 |
| Cow position: | chrX:16345382-16345499 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 133-304 |
| Cow position: | chrX:19636375-19636546 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 133-304 |
| Cow position: | chrX:23819760-23819585 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 116, 61 |
| Conread position: | 133-304 |
| Cow position: | chrX:23932768-23932589 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 133-304 |
| Cow position: | chrX:37949244-37949428 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 133-360 |
| Cow position: | chrX:25014964-25014725 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 64, 181 |
| Conread position: | 134-278 |
| Cow position: | chrX:29023530-29023681 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 114, 63 |
| Conread position: | 134-304 |
| Cow position: | chrX:39383617-39383441 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 118, 38 |
| Conread position: | 135-250 |
| Cow position: | chrX:14908477-14908591 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 137-303 |
| Cow position: | chrX:18799817-18799646 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 114, 10 |
| Conread position: | 137-304 |
| Cow position: | chrX:8806872-8806698 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 114, 71 |
| Conread position: | 137-304 |
| Cow position: | chrX:27105421-27105250 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 112, 26 |
| Conread position: | 138-237 |
| Cow position: | chrX:41797007-41797106 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 138-250 |
| Cow position: | chrX:33003720-33003831 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 140-248 |
| Cow position: | chrX:17200257-17200365 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-250 |
| Cow position: | chrX:16514777-16514667 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-255 |
| Cow position: | chrX:23414918-23414803 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-304 |
| Cow position: | chrX:35288125-35288297 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 106, 36 |
| Conread position: | 140-304 |
| Cow position: | chrX:35409144-35409310 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 142-304 |
| Cow position: | chrX:24031338-24031168 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 147-303 |
| Cow position: | chrX:15345343-15345498 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 148-247 |
| Cow position: | chrX:42269628-42269529 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 149-303 |
| Cow position: | chrX:25045646-25045806 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 156-304 |
| Cow position: | chrX:21025554-21025397 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
Show alignments to all cow chromosomes.