Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8035I16.3 |
| Conread position: | 1-344 |
| Cow position: | chr10:21938973-21938633 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 128, 123 |
| Conread position: | 1-464 |
| Cow position: | chr10:9010301-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 210, 198 |
| Conread position: | 1-638 |
| Cow position: | chr10:9031268-9031890 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 214 |
| Conread position: | 1-652 |
| Cow position: | chr10:8996657-8996003 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 378, 372 |
| Conread position: | 1-738 |
| Cow position: | chr10:8996741-8996001 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 410, 385 |
| Conread position: | 4-551 |
| Cow position: | chr10:9010382-9009832 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 376, 369 |
| Conread position: | 34-716 |
| Cow position: | chr10:9010520-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 84 |
| Conread position: | 45-773 |
| Cow position: | chr10:9010593-9009862 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 30 |
| Conread position: | 51-779 |
| Cow position: | chr10:8996775-8996044 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 0 |
| Conread position: | 55-371 |
| Cow position: | chr10:21939003-21938689 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 243, 251 |
| Conread position: | 61-779 |
| Cow position: | chr10:8996849-8996128 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 196 |
| Conread position: | 65-659 |
| Cow position: | chr10:9031248-9031827 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 151 |
| Conread position: | 112-773 |
| Cow position: | chr10:8996882-8996218 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 89 |
| Conread position: | 129-562 |
| Cow position: | chr10:9031228-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 87 |
| Conread position: | 131-780 |
| Cow position: | chr10:9010591-9009939 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 85 |
| Conread position: | 139-679 |
| Cow position: | chr10:21939171-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 331 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 140, 123 |
| Conread position: | 144-770 |
| Cow position: | chr10:8996934-8996305 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 229 |
| Conread position: | 167-646 |
| Cow position: | chr10:9031182-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 218 |
| Conread position: | 307-779 |
| Cow position: | chr10:21939171-21938698 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 145, 250 |
| Conread position: | 331-730 |
| Cow position: | chr10:9031262-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 235 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 69, 55 |
| Conread position: | 384-823 |
| Cow position: | chr10:9031230-9031675 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 424-772 |
| Cow position: | chr10:21939222-21938871 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 19, 163 |
| Conread position: | 451-779 |
| Cow position: | chr10:8996876-8996548 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 249, 238 |
| Conread position: | 462-770 |
| Cow position: | chr10:9031228-9031536 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 59, 69 |
| Conread position: | 462-779 |
| Cow position: | chr10:8997021-8996716 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 6, 15 |
| Conread position: | 480-776 |
| Cow position: | chr10:8996933-8996635 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 505-773 |
| Cow position: | chr10:21939222-21938954 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 546-779 |
| Cow position: | chr10:9031228-9031461 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 68 |
Show alignments to all cow chromosomes.