Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8035I16.3 |
| Conread position: | 1-354 |
| Cow position: | chr17:22473609-22473963 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 315, 0 |
| Conread position: | 1-361 |
| Cow position: | chr17:22452022-22451662 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 201, 190 |
| Conread position: | 1-668 |
| Cow position: | chr17:22499204-22498534 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 189 |
| Conread position: | 1-679 |
| Cow position: | chr17:22452358-22451677 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 215 |
| Conread position: | 1-752 |
| Cow position: | chr17:22499288-22498534 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 442, 0 |
| Conread position: | 1-759 |
| Cow position: | chr17:22552241-22551480 (view UCSC Genome Browser custom track) |
| Alignm length: | 767 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 1-770 |
| Cow position: | chr17:22590247-22589475 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 399, 385 |
| Conread position: | 1-771 |
| Cow position: | chr17:22589995-22589222 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 190 |
| Conread position: | 1-773 |
| Cow position: | chr17:22499372-22498597 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 213 |
| Conread position: | 1-773 |
| Cow position: | chr17:22553081-22552306 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 73 |
| Conread position: | 1-780 |
| Cow position: | chr17:22552577-22551795 (view UCSC Genome Browser custom track) |
| Alignm length: | 787 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 212 |
| Conread position: | 2-773 |
| Cow position: | chr17:22552996-22552222 (view UCSC Genome Browser custom track) |
| Alignm length: | 779 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 126 |
| Conread position: | 4-524 |
| Cow position: | chr17:22473444-22473967 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 185 |
| Conread position: | 4-686 |
| Cow position: | chr17:22473276-22473962 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 114 |
| Conread position: | 4-771 |
| Cow position: | chr17:22552322-22551552 (view UCSC Genome Browser custom track) |
| Alignm length: | 775 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 209 |
| Conread position: | 42-778 |
| Cow position: | chr17:22552368-22551629 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 81 |
| Conread position: | 55-743 |
| Cow position: | chr17:41440878-41440187 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 404 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 5, 12 |
| Conread position: | 55-767 |
| Cow position: | chr17:22452388-22451673 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 123 |
| Conread position: | 60-773 |
| Cow position: | chr17:22499395-22498681 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 9 |
| Conread position: | 61-770 |
| Cow position: | chr17:22553105-22552393 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 96 |
| Conread position: | 64-779 |
| Cow position: | chr17:22473174-22473886 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 27 |
| Conread position: | 77-760 |
| Cow position: | chr17:22473265-22473952 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 305 |
| Conread position: | 78-773 |
| Cow position: | chr17:22590254-22589556 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 138 |
| Conread position: | 112-770 |
| Cow position: | chr17:22590304-22589643 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 283 |
| Conread position: | 114-772 |
| Cow position: | chr17:22499427-22498766 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 127-778 |
| Cow position: | chr17:22452400-22451746 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 13 |
| Conread position: | 128-780 |
| Cow position: | chr17:22553122-22552467 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 267 |
| Conread position: | 194-771 |
| Cow position: | chr17:22499431-22498851 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 200 |
| Conread position: | 295-779 |
| Cow position: | chr17:22452400-22451913 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 100 |
| Conread position: | 305-779 |
| Cow position: | chr17:41441048-41440571 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 399-773 |
| Cow position: | chr17:22590269-22589892 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 49, 308 |
| Conread position: | 408-780 |
| Cow position: | chr17:22499385-22499011 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 370 |
| Conread position: | 450-779 |
| Cow position: | chr17:22452410-22452081 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 166, 179 |
| Conread position: | 452-773 |
| Cow position: | chr17:22590297-22589976 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 156, 162 |
| Conread position: | 457-773 |
| Cow position: | chr17:22499417-22499101 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.