Cow genome map

Conread name: Ss1.1-Pig4-TMW8035I16.3

Conread position: 1-352
Cow position:
Alignm length: 352
Alignm identity: 224
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 1-571
Cow position:
Alignm length: 578
Alignm identity: 345
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 152

Conread position: 1-581
Cow position:
Alignm length: 585
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 381

Conread position: 1-598
Cow position:
Alignm length: 601
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 444, 578

Conread position: 1-647
Cow position:
Alignm length: 653
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 155

Conread position: 1-651
Cow position:
Alignm length: 659
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 153

Conread position: 1-660
Cow position:
Alignm length: 670
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 30

Conread position: 1-726
Cow position:
Alignm length: 730
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 66

Conread position: 1-731
Cow position:
Alignm length: 738
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 114

Conread position: 1-738
Cow position:
Alignm length: 743
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 380

Conread position: 1-739
Cow position:
Alignm length: 744
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 93

Conread position: 1-743
Cow position:
Alignm length: 753
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 117

Conread position: 1-767
Cow position:
Alignm length: 771
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 50

Conread position: 1-770
Cow position:
Alignm length: 776
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 18

Conread position: 1-770
Cow position:
Alignm length: 781
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 117

Conread position: 1-772
Cow position:
Alignm length: 775
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 177

Conread position: 1-772
Cow position:
Alignm length: 778
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 381

Conread position: 1-772
Cow position:
Alignm length: 779
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 93

Conread position: 1-772
Cow position:
Alignm length: 779
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 441, 457

Conread position: 1-773
Cow position:
Alignm length: 782
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 127

Conread position: 1-773
Cow position:
Alignm length: 783
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 200

Conread position: 1-773
Cow position:
Alignm length: 779
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 117

Conread position: 1-774
Cow position:
Alignm length: 784
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 34

Conread position: 1-776
Cow position:
Alignm length: 781
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 49

Conread position: 1-778
Cow position:
Alignm length: 784
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 351

Conread position: 1-779
Cow position:
Alignm length: 784
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 382

Conread position: 1-779
Cow position:
Alignm length: 783
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 449, 690

Conread position: 1-785
Cow position:
Alignm length: 790
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 261

Conread position: 3-770
Cow position:
Alignm length: 772
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 442, 620

Conread position: 4-303
Cow position:
Alignm length: 300
Alignm identity: 188
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 26-755
Cow position:
Alignm length: 740
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 51

Conread position: 31-773
Cow position:
Alignm length: 750
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 88

Conread position: 34-777
Cow position:
Alignm length: 750
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 94

Conread position: 34-778
Cow position:
Alignm length: 749
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 414, 597

Conread position: 34-778
Cow position:
Alignm length: 749
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 27

Conread position: 38-644
Cow position:
Alignm length: 611
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 405, 515

Conread position: 42-738
Cow position:
Alignm length: 700
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 402, 684

Conread position: 42-739
Cow position:
Alignm length: 701
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 259

Conread position: 42-770
Cow position:
Alignm length: 736
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 81

Conread position: 42-779
Cow position:
Alignm length: 744
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 319

Conread position: 43-447
Cow position:
Alignm length: 406
Alignm identity: 248
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 341, 347

Conread position: 52-674
Cow position:
Alignm length: 631
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 164

Conread position: 55-773
Cow position:
Alignm length: 724
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 327

Conread position: 59-772
Cow position:
Alignm length: 719
Alignm identity: 423
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 340, 67

Conread position: 61-773
Cow position:
Alignm length: 719
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 547

Conread position: 62-773
Cow position:
Alignm length: 716
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 29

Conread position: 63-772
Cow position:
Alignm length: 714
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 318

Conread position: 63-779
Cow position:
Alignm length: 722
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 243

Conread position: 65-772
Cow position:
Alignm length: 714
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 151

Conread position: 79-742
Cow position:
Alignm length: 668
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 622

Conread position: 118-779
Cow position:
Alignm length: 668
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 24

Conread position: 128-779
Cow position:
Alignm length: 656
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 5

Conread position: 136-777
Cow position:
Alignm length: 646
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 49

Conread position: 138-739
Cow position:
Alignm length: 612
Alignm identity: 382
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 50, 18

Conread position: 145-778
Cow position:
Alignm length: 638
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 562

Conread position: 147-774
Cow position:
Alignm length: 633
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 69

Conread position: 223-773
Cow position:
Alignm length: 558
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 163

Conread position: 230-779
Cow position:
Alignm length: 554
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 461

Conread position: 262-773
Cow position:
Alignm length: 512
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 295-779
Cow position:
Alignm length: 489
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 100

Conread position: 300-779
Cow position:
Alignm length: 485
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 9

Conread position: 318-779
Cow position:
Alignm length: 465
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 8

Conread position: 467-774
Cow position:
Alignm length: 312
Alignm identity: 198
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 63, 6

Conread position: 478-779
Cow position:
Alignm length: 302
Alignm identity: 203
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 481-777
Cow position:
Alignm length: 298
Alignm identity: 200
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 221, 196

Show alignments to all cow chromosomes.