Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8035I16.3 |
| Conread position: | 1-646 |
| Cow position: | chr2:82799800-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 447, 585 |
| Conread position: | 1-759 |
| Cow position: | chr2:78755608-78756365 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 1-761 |
| Cow position: | chr2:5875160-5874397 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 443 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 240, 253 |
| Conread position: | 1-772 |
| Cow position: | chr2:78755190-78755960 (view UCSC Genome Browser custom track) |
| Alignm length: | 779 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 1-773 |
| Cow position: | chr2:78754938-78755709 (view UCSC Genome Browser custom track) |
| Alignm length: | 779 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 188 |
| Conread position: | 1-779 |
| Cow position: | chr2:82799548-82800329 (view UCSC Genome Browser custom track) |
| Alignm length: | 785 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 1-779 |
| Cow position: | chr2:82799632-82800413 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 383 |
| Conread position: | 2-770 |
| Cow position: | chr2:78755275-78756042 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 33 |
| Conread position: | 2-770 |
| Cow position: | chr2:78755525-78756295 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 140 |
| Conread position: | 2-773 |
| Cow position: | chr2:86465541-86466312 (view UCSC Genome Browser custom track) |
| Alignm length: | 781 |
| Alignm identity: | 448 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 115, 104 |
| Conread position: | 3-778 |
| Cow position: | chr2:78754536-78755298 (view UCSC Genome Browser custom track) |
| Alignm length: | 783 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 115 |
| Conread position: | 3-778 |
| Cow position: | chr2:78755443-78756219 (view UCSC Genome Browser custom track) |
| Alignm length: | 787 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 4-770 |
| Cow position: | chr2:82799467-82800237 (view UCSC Genome Browser custom track) |
| Alignm length: | 774 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 178 |
| Conread position: | 29-647 |
| Cow position: | chr2:5874712-5874091 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 377 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 65, 90 |
| Conread position: | 34-773 |
| Cow position: | chr2:78755139-78755877 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 106 |
| Conread position: | 34-773 |
| Cow position: | chr2:86465405-86466147 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 238 |
| Conread position: | 47-773 |
| Cow position: | chr2:78754246-78754957 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 448 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 225, 196 |
| Conread position: | 51-770 |
| Cow position: | chr2:78754334-78755038 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 76 |
| Conread position: | 55-773 |
| Cow position: | chr2:78754824-78755543 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 328 |
| Conread position: | 56-773 |
| Cow position: | chr2:86465091-86465811 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 426 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 168, 158 |
| Conread position: | 63-774 |
| Cow position: | chr2:86465266-86465980 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 151 |
| Conread position: | 77-773 |
| Cow position: | chr2:78754111-78754801 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 426 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 121, 58 |
| Conread position: | 78-779 |
| Cow position: | chr2:82799457-82800161 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 138 |
| Conread position: | 112-770 |
| Cow position: | chr2:78754798-78755457 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 15 |
| Conread position: | 149-778 |
| Cow position: | chr2:5875180-5874548 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 378 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 152, 159 |
| Conread position: | 151-772 |
| Cow position: | chr2:78754101-78754719 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 385 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 47, 39 |
| Conread position: | 221-778 |
| Cow position: | chr2:82799432-82799992 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 164 |
| Conread position: | 286-770 |
| Cow position: | chr2:86465153-86465640 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 457-767 |
| Cow position: | chr2:86465075-86465385 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 174, 178 |
| Conread position: | 463-779 |
| Cow position: | chr2:48689391-48689075 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 234, 219 |
Show alignments to all cow chromosomes.