Cow genome map

Conread name: Ss1.1-Pig4-TMW8035I16.3

Conread position: 1-244
Cow position:
Alignm length: 245
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 116

Conread position: 1-394
Cow position:
Alignm length: 396
Alignm identity: 241
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 188, 201

Conread position: 1-485
Cow position:
Alignm length: 491
Alignm identity: 305
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 21

Conread position: 1-494
Cow position:
Alignm length: 502
Alignm identity: 315
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 127, 99

Conread position: 1-521
Cow position:
Alignm length: 524
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 446, 0

Conread position: 1-537
Cow position:
Alignm length: 542
Alignm identity: 334
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 189, 203

Conread position: 1-568
Cow position:
Alignm length: 576
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 117

Conread position: 1-646
Cow position:
Alignm length: 652
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 374

Conread position: 1-652
Cow position:
Alignm length: 655
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 450, 0

Conread position: 1-657
Cow position:
Alignm length: 663
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 188

Conread position: 1-676
Cow position:
Alignm length: 685
Alignm identity: 391
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 228, 244

Conread position: 1-734
Cow position:
Alignm length: 741
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 193

Conread position: 1-742
Cow position:
Alignm length: 745
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 450, 0

Conread position: 1-742
Cow position:
Alignm length: 747
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 374

Conread position: 1-770
Cow position:
Alignm length: 773
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 443, 0

Conread position: 1-770
Cow position:
Alignm length: 777
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 136

Conread position: 1-772
Cow position:
Alignm length: 780
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 136

Conread position: 1-772
Cow position:
Alignm length: 777
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 213

Conread position: 1-773
Cow position:
Alignm length: 780
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 96

Conread position: 1-773
Cow position:
Alignm length: 776
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 447, 0

Conread position: 1-773
Cow position:
Alignm length: 778
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 215

Conread position: 1-777
Cow position:
Alignm length: 782
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 449, 625

Conread position: 1-777
Cow position:
Alignm length: 780
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 449, 0

Conread position: 1-778
Cow position:
Alignm length: 783
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 51

Conread position: 1-778
Cow position:
Alignm length: 783
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 24

Conread position: 1-789
Cow position:
Alignm length: 792
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 442, 786

Conread position: 2-687
Cow position:
Alignm length: 694
Alignm identity: 413
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 28

Conread position: 3-772
Cow position:
Alignm length: 781
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 25

Conread position: 3-779
Cow position:
Alignm length: 782
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 392

Conread position: 4-518
Cow position:
Alignm length: 522
Alignm identity: 305
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 202, 187

Conread position: 4-602
Cow position:
Alignm length: 607
Alignm identity: 370
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 35, 26

Conread position: 4-657
Cow position:
Alignm length: 661
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 187

Conread position: 4-727
Cow position:
Alignm length: 730
Alignm identity: 442
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 23, 31

Conread position: 4-772
Cow position:
Alignm length: 776
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 187

Conread position: 34-620
Cow position:
Alignm length: 591
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 228

Conread position: 34-730
Cow position:
Alignm length: 702
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 416, 574

Conread position: 34-770
Cow position:
Alignm length: 743
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 361

Conread position: 34-773
Cow position:
Alignm length: 752
Alignm identity: 446
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 88, 82

Conread position: 40-742
Cow position:
Alignm length: 710
Alignm identity: 411
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 172, 152

Conread position: 40-745
Cow position:
Alignm length: 711
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 322

Conread position: 41-772
Cow position:
Alignm length: 742
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 152

Conread position: 41-773
Cow position:
Alignm length: 744
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 118

Conread position: 42-782
Cow position:
Alignm length: 748
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 344

Conread position: 42-782
Cow position:
Alignm length: 747
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 344

Conread position: 51-738
Cow position:
Alignm length: 693
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 165

Conread position: 51-769
Cow position:
Alignm length: 727
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 324

Conread position: 51-772
Cow position:
Alignm length: 743
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 361

Conread position: 51-778
Cow position:
Alignm length: 734
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 335

Conread position: 51-779
Cow position:
Alignm length: 734
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 9

Conread position: 52-754
Cow position:
Alignm length: 710
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 57

Conread position: 52-779
Cow position:
Alignm length: 731
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 0

Conread position: 59-780
Cow position:
Alignm length: 743
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 353

Conread position: 63-785
Cow position:
Alignm length: 727
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 243

Conread position: 65-779
Cow position:
Alignm length: 723
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 330

Conread position: 70-779
Cow position:
Alignm length: 714
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 464

Conread position: 73-778
Cow position:
Alignm length: 710
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 457

Conread position: 76-779
Cow position:
Alignm length: 709
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 70

Conread position: 77-651
Cow position:
Alignm length: 581
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 539

Conread position: 77-779
Cow position:
Alignm length: 712
Alignm identity: 422
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 37, 23

Conread position: 79-771
Cow position:
Alignm length: 702
Alignm identity: 419
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 224, 219

Conread position: 92-737
Cow position:
Alignm length: 654
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 26

Conread position: 127-773
Cow position:
Alignm length: 659
Alignm identity: 401
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 167, 148

Conread position: 127-778
Cow position:
Alignm length: 660
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 173

Conread position: 127-788
Cow position:
Alignm length: 671
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 13

Conread position: 128-770
Cow position:
Alignm length: 647
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 490

Conread position: 130-773
Cow position:
Alignm length: 651
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 171

Conread position: 144-789
Cow position:
Alignm length: 650
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 478

Conread position: 156-736
Cow position:
Alignm length: 584
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 0

Conread position: 167-773
Cow position:
Alignm length: 615
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 128

Conread position: 172-779
Cow position:
Alignm length: 616
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 19

Conread position: 280-771
Cow position:
Alignm length: 497
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 33

Conread position: 280-771
Cow position:
Alignm length: 497
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 33

Conread position: 286-772
Cow position:
Alignm length: 496
Alignm identity: 303
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 12

Conread position: 294-741
Cow position:
Alignm length: 458
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 14

Conread position: 294-772
Cow position:
Alignm length: 489
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 14

Conread position: 295-773
Cow position:
Alignm length: 490
Alignm identity: 296
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 104, 87

Conread position: 305-772
Cow position:
Alignm length: 475
Alignm identity: 306
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 143, 222

Conread position: 319-772
Cow position:
Alignm length: 463
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 76

Conread position: 319-781
Cow position:
Alignm length: 469
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 76

Conread position: 325-780
Cow position:
Alignm length: 463
Alignm identity: 278
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 65, 61

Conread position: 389-771
Cow position:
Alignm length: 389
Alignm identity: 258
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 41, 12

Conread position: 402-773
Cow position:
Alignm length: 375
Alignm identity: 245
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 44, 6

Conread position: 403-781
Cow position:
Alignm length: 383
Alignm identity: 251
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 45, 137

Conread position: 447-779
Cow position:
Alignm length: 333
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 461-687
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 469-779
Cow position:
Alignm length: 314
Alignm identity: 212
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 62, 55

Conread position: 484-771
Cow position:
Alignm length: 288
Alignm identity: 204
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 78, 0

Conread position: 507-773
Cow position:
Alignm length: 268
Alignm identity: 172
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 117, 122

Conread position: 542-779
Cow position:
Alignm length: 239
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 53, 66

Conread position: 542-783
Cow position:
Alignm length: 244
Alignm identity: 163
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 26, 20

Conread position: 608-779
Cow position:
Alignm length: 172
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 8, 0

Show alignments to all cow chromosomes.