Cow genome map

Conread name: Ss1.1-Pig4-TMW8035I16.3

Conread position: 1-204
Cow position: chr24:16986451-16986654 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 103, 91

Conread position: 1-214
Cow position: chr24:17013269-17013482 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-288
Cow position: chr24:17013185-17013472 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 1-478
Cow position: chr24:17077988-17077508 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 51

Conread position: 1-490
Cow position: chr24:17070564-17071056 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 393

Conread position: 1-751
Cow position: chr24:17035685-17034933 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 215

Conread position: 1-773
Cow position: chr24:17035937-17035162 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 214

Conread position: 1-773
Cow position: chr24:17036606-17035834 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 26

Conread position: 4-730
Cow position: chr24:17078237-17077508 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 395, 390

Conread position: 4-773
Cow position: chr24:17035850-17035078 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 52

Conread position: 4-778
Cow position: chr24:17036102-17035325 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 391

Conread position: 4-779
Cow position: chr24:17036188-17035408 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 50

Conread position: 4-779
Cow position: chr24:17036270-17035492 (view UCSC Genome Browser custom track)
Alignm length: 782
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 302

Conread position: 10-758
Cow position: chr24:17035760-17035009 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 438, 598

Conread position: 10-777
Cow position: chr24:17036012-17035242 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 44

Conread position: 33-574
Cow position: chr24:17070512-17071056 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 291

Conread position: 34-655
Cow position: chr24:17078123-17077499 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 414, 426

Conread position: 42-779
Cow position: chr24:17078283-17077543 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 406, 418

Conread position: 45-742
Cow position: chr24:17070356-17071056 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 61

Conread position: 58-779
Cow position: chr24:17078351-17077627 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 43

Conread position: 59-289
Cow position: chr24:16986425-16986655 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 152
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 129, 117

Conread position: 62-426
Cow position: chr24:17013162-17013525 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 233
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 160, 152

Conread position: 65-779
Cow position: chr24:17036627-17035912 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 37

Conread position: 131-487
Cow position: chr24:17013147-17013506 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 224
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 317, 0

Conread position: 146-365
Cow position: chr24:16986428-16986647 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 110

Conread position: 295-779
Cow position: chr24:17070522-17071009 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 89

Conread position: 329-538
Cow position: chr24:16986443-16986655 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 52

Conread position: 383-779
Cow position: chr24:17070358-17070757 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 10

Conread position: 390-759
Cow position: chr24:17013156-17013525 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 23

Conread position: 413-620
Cow position: chr24:16986443-16986653 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 461-779
Cow position: chr24:17078365-17078047 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 464-779
Cow position: chr24:17013147-17013462 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 7, 19

Conread position: 531-779
Cow position: chr24:16986397-16986644 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 173, 16

Show alignments to all cow chromosomes.