Cow genome map

Conread name: Ss1.1-Pig4-TMW8035I16.3

Conread position: 1-225
Cow position:
Alignm length: 226
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 29

Conread position: 1-309
Cow position:
Alignm length: 309
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 1-313
Cow position:
Alignm length: 314
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 24

Conread position: 1-438
Cow position:
Alignm length: 442
Alignm identity: 275
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 126, 120

Conread position: 1-447
Cow position:
Alignm length: 449
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 215

Conread position: 1-490
Cow position:
Alignm length: 494
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 381

Conread position: 1-508
Cow position:
Alignm length: 517
Alignm identity: 313
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 197, 125

Conread position: 1-538
Cow position:
Alignm length: 544
Alignm identity: 330
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 280, 285

Conread position: 1-540
Cow position:
Alignm length: 545
Alignm identity: 338
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 102, 111

Conread position: 1-637
Cow position:
Alignm length: 642
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 215

Conread position: 1-653
Cow position:
Alignm length: 659
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 305

Conread position: 1-687
Cow position:
Alignm length: 693
Alignm identity: 421
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 45, 51

Conread position: 1-727
Cow position:
Alignm length: 738
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 24

Conread position: 1-733
Cow position:
Alignm length: 737
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 448, 492

Conread position: 1-739
Cow position:
Alignm length: 750
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 374

Conread position: 1-771
Cow position:
Alignm length: 777
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 214

Conread position: 1-771
Cow position:
Alignm length: 776
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 239

Conread position: 1-771
Cow position:
Alignm length: 783
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 89

Conread position: 1-771
Cow position:
Alignm length: 777
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 1-773
Cow position:
Alignm length: 778
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 379, 374

Conread position: 1-778
Cow position:
Alignm length: 785
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 198

Conread position: 1-778
Cow position:
Alignm length: 784
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 96

Conread position: 1-779
Cow position:
Alignm length: 784
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 215

Conread position: 2-643
Cow position:
Alignm length: 649
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 50

Conread position: 3-778
Cow position:
Alignm length: 783
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 116

Conread position: 4-299
Cow position:
Alignm length: 296
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 4-393
Cow position:
Alignm length: 392
Alignm identity: 254
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 105, 115

Conread position: 4-769
Cow position:
Alignm length: 774
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 295

Conread position: 4-778
Cow position:
Alignm length: 784
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 188

Conread position: 6-760
Cow position:
Alignm length: 769
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 34

Conread position: 8-727
Cow position:
Alignm length: 728
Alignm identity: 433
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 242, 247

Conread position: 34-515
Cow position:
Alignm length: 498
Alignm identity: 301
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 132, 335

Conread position: 34-527
Cow position:
Alignm length: 500
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 122

Conread position: 34-726
Cow position:
Alignm length: 699
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 272

Conread position: 34-727
Cow position:
Alignm length: 697
Alignm identity: 394
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 80, 86

Conread position: 34-761
Cow position:
Alignm length: 740
Alignm identity: 434
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 83, 97

Conread position: 34-763
Cow position:
Alignm length: 739
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 78

Conread position: 34-778
Cow position:
Alignm length: 750
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 272

Conread position: 34-779
Cow position:
Alignm length: 751
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 356

Conread position: 34-779
Cow position:
Alignm length: 752
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 152

Conread position: 35-779
Cow position:
Alignm length: 748
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 413, 0

Conread position: 35-782
Cow position:
Alignm length: 754
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 17

Conread position: 40-349
Cow position:
Alignm length: 312
Alignm identity: 192
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 75, 80

Conread position: 43-603
Cow position:
Alignm length: 567
Alignm identity: 350
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 258, 17

Conread position: 54-770
Cow position:
Alignm length: 733
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 21

Conread position: 55-640
Cow position:
Alignm length: 591
Alignm identity: 360
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 246, 251

Conread position: 55-726
Cow position:
Alignm length: 679
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 136

Conread position: 55-771
Cow position:
Alignm length: 725
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 138

Conread position: 55-779
Cow position:
Alignm length: 731
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 21

Conread position: 55-779
Cow position:
Alignm length: 729
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 397, 554

Conread position: 57-574
Cow position:
Alignm length: 521
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 0

Conread position: 57-770
Cow position:
Alignm length: 720
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 300

Conread position: 60-775
Cow position:
Alignm length: 720
Alignm identity: 426
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 260, 251

Conread position: 60-779
Cow position:
Alignm length: 723
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 0

Conread position: 61-654
Cow position:
Alignm length: 598
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 153

Conread position: 61-654
Cow position:
Alignm length: 603
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 127

Conread position: 61-765
Cow position:
Alignm length: 712
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 245

Conread position: 61-767
Cow position:
Alignm length: 718
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 62

Conread position: 61-772
Cow position:
Alignm length: 716
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 129

Conread position: 61-774
Cow position:
Alignm length: 718
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 17

Conread position: 63-371
Cow position:
Alignm length: 310
Alignm identity: 195
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 226, 233

Conread position: 64-242
Cow position:
Alignm length: 179
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 64-764
Cow position:
Alignm length: 709
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 77

Conread position: 64-771
Cow position:
Alignm length: 713
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 322

Conread position: 64-771
Cow position:
Alignm length: 712
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 321

Conread position: 65-308
Cow position:
Alignm length: 244
Alignm identity: 156
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 65-659
Cow position:
Alignm length: 599
Alignm identity: 346
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 62, 50

Conread position: 65-770
Cow position:
Alignm length: 721
Alignm identity: 422
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 143, 150

Conread position: 67-616
Cow position:
Alignm length: 555
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 27

Conread position: 67-779
Cow position:
Alignm length: 718
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 381, 629

Conread position: 75-773
Cow position:
Alignm length: 707
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 141

Conread position: 84-637
Cow position:
Alignm length: 558
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 301

Conread position: 112-779
Cow position:
Alignm length: 673
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 81

Conread position: 127-773
Cow position:
Alignm length: 653
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 179

Conread position: 127-773
Cow position:
Alignm length: 651
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 567

Conread position: 139-771
Cow position:
Alignm length: 641
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 118

Conread position: 145-735
Cow position:
Alignm length: 596
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 166

Conread position: 167-773
Cow position:
Alignm length: 611
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 206

Conread position: 206-773
Cow position:
Alignm length: 573
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 24

Conread position: 216-770
Cow position:
Alignm length: 564
Alignm identity: 339
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 163, 145

Conread position: 230-771
Cow position:
Alignm length: 549
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 156

Conread position: 262-742
Cow position:
Alignm length: 485
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 133

Conread position: 264-779
Cow position:
Alignm length: 521
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 22

Conread position: 278-772
Cow position:
Alignm length: 512
Alignm identity: 329
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 104, 86

Conread position: 295-779
Cow position:
Alignm length: 488
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 318-726
Cow position:
Alignm length: 415
Alignm identity: 254
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 43

Conread position: 318-780
Cow position:
Alignm length: 467
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 77

Conread position: 319-781
Cow position:
Alignm length: 466
Alignm identity: 281
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 128, 0

Conread position: 322-773
Cow position:
Alignm length: 457
Alignm identity: 281
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 128, 286

Conread position: 336-779
Cow position:
Alignm length: 451
Alignm identity: 289
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 74, 48

Conread position: 369-773
Cow position:
Alignm length: 409
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 17

Conread position: 380-778
Cow position:
Alignm length: 400
Alignm identity: 256
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 188, 59

Conread position: 387-772
Cow position:
Alignm length: 391
Alignm identity: 257
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 57, 220

Conread position: 392-771
Cow position:
Alignm length: 384
Alignm identity: 249
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 5, 19

Conread position: 400-592
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 400-781
Cow position:
Alignm length: 390
Alignm identity: 255
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 80

Conread position: 415-725
Cow position:
Alignm length: 317
Alignm identity: 212
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 141

Conread position: 419-744
Cow position:
Alignm length: 333
Alignm identity: 218
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 137

Conread position: 421-779
Cow position:
Alignm length: 365
Alignm identity: 248
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 26, 57

Conread position: 421-781
Cow position:
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 422-772
Cow position:
Alignm length: 355
Alignm identity: 228
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 171, 28

Conread position: 451-777
Cow position:
Alignm length: 330
Alignm identity: 223
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 132, 0

Conread position: 460-779
Cow position:
Alignm length: 322
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 123, 130

Conread position: 460-779
Cow position:
Alignm length: 321
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 244, 233

Conread position: 464-685
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 73, 80

Conread position: 481-776
Cow position:
Alignm length: 297
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 186, 192

Conread position: 482-734
Cow position:
Alignm length: 254
Alignm identity: 162
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 111, 126

Conread position: 491-771
Cow position:
Alignm length: 281
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 493-772
Cow position:
Alignm length: 281
Alignm identity: 176
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 174, 180

Conread position: 548-769
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 46, 59

Conread position: 559-780
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 46

Conread position: 561-779
Cow position:
Alignm length: 219
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 562-779
Cow position:
Alignm length: 219
Alignm identity: 149
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 171, 166

Conread position: 566-779
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 29, 38

Show alignments to all cow chromosomes.