Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8035I16.3 |
| Conread position: | 1-205 |
| Cow position: | chr3:16020358-16020158 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 1-406 |
| Cow position: | chr3:62721968-62721563 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 1-572 |
| Cow position: | chr3:68027197-68027769 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 352 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 362, 378 |
| Conread position: | 1-643 |
| Cow position: | chr3:68045706-68046351 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 447, 0 |
| Conread position: | 1-651 |
| Cow position: | chr3:62722220-62721567 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 55 |
| Conread position: | 1-652 |
| Cow position: | chr3:62742798-62743431 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 1-738 |
| Cow position: | chr3:62722304-62721564 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 446, 0 |
| Conread position: | 2-772 |
| Cow position: | chr3:62742552-62743299 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 86 |
| Conread position: | 3-754 |
| Cow position: | chr3:68027031-68027784 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 445, 605 |
| Conread position: | 3-776 |
| Cow position: | chr3:62742718-62743471 (view UCSC Genome Browser custom track) |
| Alignm length: | 782 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 34-192 |
| Cow position: | chr3:16020409-16020251 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 94, 90 |
| Conread position: | 34-687 |
| Cow position: | chr3:68045655-68046311 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 355 |
| Conread position: | 35-680 |
| Cow position: | chr3:77351102-77350474 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 397 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 93, 65 |
| Conread position: | 43-740 |
| Cow position: | chr3:62742342-62743032 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 12 |
| Conread position: | 55-779 |
| Cow position: | chr3:62742270-62742992 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 84 |
| Conread position: | 66-779 |
| Cow position: | chr3:62722323-62721607 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 150 |
| Conread position: | 112-776 |
| Cow position: | chr3:68045565-68046232 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 274 |
| Conread position: | 118-773 |
| Cow position: | chr3:68045655-68046313 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 90 |
| Conread position: | 119-776 |
| Cow position: | chr3:68026982-68027639 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 9 |
| Conread position: | 123-778 |
| Cow position: | chr3:62742254-62742906 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 72 |
| Conread position: | 132-773 |
| Cow position: | chr3:68027076-68027720 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 254 |
| Conread position: | 193-802 |
| Cow position: | chr3:68045562-68046174 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 105 |
| Conread position: | 278-774 |
| Cow position: | chr3:77351193-77350703 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 315 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 170, 15 |
| Conread position: | 286-779 |
| Cow position: | chr3:68027062-68027558 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 421-778 |
| Cow position: | chr3:62743034-62743389 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 243 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 28, 83 |
| Conread position: | 454-773 |
| Cow position: | chr3:62742252-62742570 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 462-779 |
| Cow position: | chr3:68026990-68027306 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 217 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 240, 11 |
| Conread position: | 554-777 |
| Cow position: | chr3:16020467-16020251 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 41, 55 |
Show alignments to all cow chromosomes.