Cow genome map

Conread name: Ss1.1-Pig4-TMW8035I16.3

Conread position: 1-320
Cow position:
Alignm length: 321
Alignm identity: 200
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 311, 0

Conread position: 1-362
Cow position:
Alignm length: 364
Alignm identity: 226
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 35

Conread position: 1-451
Cow position:
Alignm length: 451
Alignm identity: 279
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 1-518
Cow position:
Alignm length: 524
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 131

Conread position: 1-531
Cow position:
Alignm length: 536
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 446, 0

Conread position: 1-559
Cow position:
Alignm length: 566
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 191

Conread position: 1-568
Cow position:
Alignm length: 575
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 51

Conread position: 1-686
Cow position:
Alignm length: 693
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 98

Conread position: 1-687
Cow position:
Alignm length: 697
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 117

Conread position: 1-725
Cow position:
Alignm length: 731
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 385

Conread position: 1-771
Cow position:
Alignm length: 778
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 20

Conread position: 1-774
Cow position:
Alignm length: 784
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 126

Conread position: 1-776
Cow position:
Alignm length: 788
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 127

Conread position: 1-778
Cow position:
Alignm length: 784
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 387

Conread position: 1-778
Cow position:
Alignm length: 784
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 215

Conread position: 1-779
Cow position:
Alignm length: 784
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 102

Conread position: 1-779
Cow position:
Alignm length: 784
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 444, 708

Conread position: 1-779
Cow position:
Alignm length: 783
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 447, 518

Conread position: 1-779
Cow position:
Alignm length: 784
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 259

Conread position: 2-771
Cow position:
Alignm length: 779
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 140

Conread position: 2-779
Cow position:
Alignm length: 784
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 107

Conread position: 3-770
Cow position:
Alignm length: 772
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 436, 461

Conread position: 3-771
Cow position:
Alignm length: 778
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 49

Conread position: 4-641
Cow position:
Alignm length: 645
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 210

Conread position: 4-773
Cow position:
Alignm length: 783
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 124

Conread position: 4-776
Cow position:
Alignm length: 789
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 26

Conread position: 34-687
Cow position:
Alignm length: 661
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 259

Conread position: 34-773
Cow position:
Alignm length: 749
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 22

Conread position: 42-437
Cow position:
Alignm length: 398
Alignm identity: 242
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 113, 124

Conread position: 42-690
Cow position:
Alignm length: 658
Alignm identity: 396
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 164, 151

Conread position: 42-773
Cow position:
Alignm length: 736
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 422

Conread position: 42-779
Cow position:
Alignm length: 742
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 323

Conread position: 44-772
Cow position:
Alignm length: 747
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 88

Conread position: 46-773
Cow position:
Alignm length: 741
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 9

Conread position: 46-773
Cow position:
Alignm length: 741
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 9

Conread position: 51-767
Cow position:
Alignm length: 726
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 131

Conread position: 51-779
Cow position:
Alignm length: 737
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 32

Conread position: 51-780
Cow position:
Alignm length: 733
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 0

Conread position: 52-740
Cow position:
Alignm length: 701
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 55-576
Cow position:
Alignm length: 529
Alignm identity: 326
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 74, 51

Conread position: 55-770
Cow position:
Alignm length: 727
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 54

Conread position: 55-772
Cow position:
Alignm length: 725
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 69

Conread position: 55-772
Cow position:
Alignm length: 728
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 146

Conread position: 56-770
Cow position:
Alignm length: 725
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 42

Conread position: 60-772
Cow position:
Alignm length: 723
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 44

Conread position: 60-776
Cow position:
Alignm length: 727
Alignm identity: 446
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 68, 64

Conread position: 61-772
Cow position:
Alignm length: 720
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 129

Conread position: 73-771
Cow position:
Alignm length: 704
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 457

Conread position: 77-680
Cow position:
Alignm length: 611
Alignm identity: 361
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 85, 74

Conread position: 78-773
Cow position:
Alignm length: 709
Alignm identity: 434
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 31

Conread position: 79-778
Cow position:
Alignm length: 708
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 137

Conread position: 100-780
Cow position:
Alignm length: 689
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 117

Conread position: 118-772
Cow position:
Alignm length: 659
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 9

Conread position: 129-764
Cow position:
Alignm length: 647
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 143

Conread position: 131-778
Cow position:
Alignm length: 654
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 255

Conread position: 154-770
Cow position:
Alignm length: 629
Alignm identity: 378
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 86, 62

Conread position: 168-778
Cow position:
Alignm length: 618
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 113

Conread position: 230-773
Cow position:
Alignm length: 548
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 290

Conread position: 258-779
Cow position:
Alignm length: 530
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 37

Conread position: 279-770
Cow position:
Alignm length: 495
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 312-773
Cow position:
Alignm length: 467
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 307

Conread position: 403-777
Cow position:
Alignm length: 378
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 403-780
Cow position:
Alignm length: 382
Alignm identity: 249
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 40, 123

Conread position: 408-772
Cow position:
Alignm length: 369
Alignm identity: 230
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 44, 220

Conread position: 409-773
Cow position:
Alignm length: 373
Alignm identity: 249
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 41, 178

Conread position: 433-774
Cow position:
Alignm length: 351
Alignm identity: 237
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 26, 168

Conread position: 483-773
Cow position:
Alignm length: 294
Alignm identity: 195
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 137, 130

Conread position: 486-770
Cow position:
Alignm length: 288
Alignm identity: 182
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 217, 203

Conread position: 540-786
Cow position:
Alignm length: 249
Alignm identity: 169
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 70, 75

Show alignments to all cow chromosomes.