Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8035I16.3 |
| Conread position: | 1-356 |
| Cow position: | chr8:6958059-6957705 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 244, 284 |
| Conread position: | 1-477 |
| Cow position: | chr8:48406685-48406197 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 303 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 1-562 |
| Cow position: | chr8:46816822-46817386 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 138 |
| Conread position: | 1-650 |
| Cow position: | chr8:55581095-55581747 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 447, 630 |
| Conread position: | 1-729 |
| Cow position: | chr8:55581011-55581742 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 1-760 |
| Cow position: | chr8:48407021-48406259 (view UCSC Genome Browser custom track) |
| Alignm length: | 767 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 118 |
| Conread position: | 1-770 |
| Cow position: | chr8:46816402-46817174 (view UCSC Genome Browser custom track) |
| Alignm length: | 781 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 265 |
| Conread position: | 1-771 |
| Cow position: | chr8:46816486-46817259 (view UCSC Genome Browser custom track) |
| Alignm length: | 779 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 1-772 |
| Cow position: | chr8:55580927-55581701 (view UCSC Genome Browser custom track) |
| Alignm length: | 775 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 448, 0 |
| Conread position: | 1-773 |
| Cow position: | chr8:48407609-48406834 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 1-776 |
| Cow position: | chr8:48407273-48406495 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 305 |
| Conread position: | 1-777 |
| Cow position: | chr8:48407105-48406326 (view UCSC Genome Browser custom track) |
| Alignm length: | 783 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 201 |
| Conread position: | 1-778 |
| Cow position: | chr8:45200955-45201735 (view UCSC Genome Browser custom track) |
| Alignm length: | 786 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 59 |
| Conread position: | 1-778 |
| Cow position: | chr8:46815982-46816762 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 188 |
| Conread position: | 1-778 |
| Cow position: | chr8:46816066-46816848 (view UCSC Genome Browser custom track) |
| Alignm length: | 785 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 440, 703 |
| Conread position: | 1-778 |
| Cow position: | chr8:46816318-46817098 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 446, 463 |
| Conread position: | 1-811 |
| Cow position: | chr8:45201207-45202018 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 2-778 |
| Cow position: | chr8:45201040-45201819 (view UCSC Genome Browser custom track) |
| Alignm length: | 782 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 408, 384 |
| Conread position: | 2-778 |
| Cow position: | chr8:48407188-48406409 (view UCSC Genome Browser custom track) |
| Alignm length: | 782 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 19 |
| Conread position: | 3-776 |
| Cow position: | chr8:45201125-45201901 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 399, 392 |
| Conread position: | 34-779 |
| Cow position: | chr8:48407324-48406576 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 157 |
| Conread position: | 44-779 |
| Cow position: | chr8:55580802-55581540 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 147 |
| Conread position: | 51-770 |
| Cow position: | chr8:46816620-46817342 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 211 |
| Conread position: | 51-779 |
| Cow position: | chr8:55580893-55581624 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 165 |
| Conread position: | 61-409 |
| Cow position: | chr8:55581407-55581755 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 67, 55 |
| Conread position: | 63-776 |
| Cow position: | chr8:48407631-48406915 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 331 |
| Conread position: | 73-778 |
| Cow position: | chr8:46815883-46816594 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 50 |
| Conread position: | 78-771 |
| Cow position: | chr8:55580752-55581448 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 87 |
| Conread position: | 79-778 |
| Cow position: | chr8:45200949-45201651 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 137 |
| Conread position: | 111-778 |
| Cow position: | chr8:45200897-45201567 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 274 |
| Conread position: | 131-779 |
| Cow position: | chr8:48407647-48406996 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 47 |
| Conread position: | 169-641 |
| Cow position: | chr8:6958059-6957587 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 235, 225 |
| Conread position: | 249-725 |
| Cow position: | chr8:6958063-6957587 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 118, 129 |
| Conread position: | 262-776 |
| Cow position: | chr8:45200796-45201313 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 133 |
| Conread position: | 295-770 |
| Cow position: | chr8:46815694-46816166 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 303 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 80, 87 |
| Conread position: | 421-750 |
| Cow position: | chr8:6958059-6957728 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 27, 284 |
| Conread position: | 505-770 |
| Cow position: | chr8:6958056-6957791 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 507-778 |
| Cow position: | chr8:45200792-45201063 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 564-773 |
| Cow position: | chr8:55580736-55580946 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 588-770 |
| Cow position: | chr8:6958057-6957875 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.