Cow genome map
Conread name: | Ss1.1-Pig4-TMW8035I16.3 |
Conread position: | 1-239 |
Cow position: | chrX:29045722-29045484 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 156 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 223, 215 |
Conread position: | 1-327 |
Cow position: | chrX:29044987-29044661 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 217 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 223, 215 |
Conread position: | 1-341 |
Cow position: | chrX:25310247-25310586 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 213 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 21, 34 |
Conread position: | 1-428 |
Cow position: | chrX:14181369-14180942 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 252 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 43, 32 |
Conread position: | 1-581 |
Cow position: | chrX:25309995-25310578 (view UCSC Genome Browser custom track) |
Alignm length: | 586 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 273, 286 |
Conread position: | 1-739 |
Cow position: | chrX:25309827-25310568 (view UCSC Genome Browser custom track) |
Alignm length: | 746 |
Alignm identity: | 497 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 215 |
Conread position: | 1-739 |
Cow position: | chrX:25324978-25324237 (view UCSC Genome Browser custom track) |
Alignm length: | 744 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 399, 394 |
Conread position: | 1-772 |
Cow position: | chrX:25325230-25324456 (view UCSC Genome Browser custom track) |
Alignm length: | 778 |
Alignm identity: | 498 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 391, 387 |
Conread position: | 1-772 |
Cow position: | chrX:25325482-25324708 (view UCSC Genome Browser custom track) |
Alignm length: | 783 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 283, 295 |
Conread position: | 1-773 |
Cow position: | chrX:29045638-29044884 (view UCSC Genome Browser custom track) |
Alignm length: | 779 |
Alignm identity: | 498 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 398, 221 |
Conread position: | 1-778 |
Cow position: | chrX:25325062-25324280 (view UCSC Genome Browser custom track) |
Alignm length: | 789 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 21 |
Conread position: | 1-778 |
Cow position: | chrX:25325146-25324366 (view UCSC Genome Browser custom track) |
Alignm length: | 788 |
Alignm identity: | 516 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 51 |
Conread position: | 1-778 |
Cow position: | chrX:25325398-25324618 (view UCSC Genome Browser custom track) |
Alignm length: | 783 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 445, 703 |
Conread position: | 1-782 |
Cow position: | chrX:25309743-25310527 (view UCSC Genome Browser custom track) |
Alignm length: | 788 |
Alignm identity: | 514 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 189 |
Conread position: | 2-580 |
Cow position: | chrX:29045238-29044657 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 214 |
Conread position: | 3-496 |
Cow position: | chrX:29045153-29044657 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 396, 382 |
Conread position: | 4-418 |
Cow position: | chrX:29045068-29044654 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 52 |
Conread position: | 34-773 |
Cow position: | chrX:25325701-25324959 (view UCSC Genome Browser custom track) |
Alignm length: | 747 |
Alignm identity: | 469 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 122 |
Conread position: | 34-778 |
Cow position: | chrX:25325533-25324786 (view UCSC Genome Browser custom track) |
Alignm length: | 752 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 366, 361 |
Conread position: | 35-771 |
Cow position: | chrX:25309693-25310432 (view UCSC Genome Browser custom track) |
Alignm length: | 744 |
Alignm identity: | 490 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 32 |
Conread position: | 37-660 |
Cow position: | chrX:29045287-29044661 (view UCSC Genome Browser custom track) |
Alignm length: | 629 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 362, 357 |
Conread position: | 46-770 |
Cow position: | chrX:12627339-12628062 (view UCSC Genome Browser custom track) |
Alignm length: | 742 |
Alignm identity: | 454 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 93, 5 |
Conread position: | 51-770 |
Cow position: | chrX:29045756-29045055 (view UCSC Genome Browser custom track) |
Alignm length: | 722 |
Alignm identity: | 442 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 163 |
Conread position: | 51-796 |
Cow position: | chrX:25325768-25325021 (view UCSC Genome Browser custom track) |
Alignm length: | 755 |
Alignm identity: | 488 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 338, 332 |
Conread position: | 55-677 |
Cow position: | chrX:14181567-14180942 (view UCSC Genome Browser custom track) |
Alignm length: | 632 |
Alignm identity: | 378 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 49, 73 |
Conread position: | 56-772 |
Cow position: | chrX:25325595-25324876 (view UCSC Genome Browser custom track) |
Alignm length: | 723 |
Alignm identity: | 483 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 343, 338 |
Conread position: | 59-773 |
Cow position: | chrX:29045832-29045136 (view UCSC Genome Browser custom track) |
Alignm length: | 717 |
Alignm identity: | 440 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 157 |
Conread position: | 64-771 |
Cow position: | chrX:12627271-12627979 (view UCSC Genome Browser custom track) |
Alignm length: | 717 |
Alignm identity: | 422 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 59, 64 |
Conread position: | 64-771 |
Cow position: | chrX:13826948-13826238 (view UCSC Genome Browser custom track) |
Alignm length: | 713 |
Alignm identity: | 410 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 51, 55 |
Conread position: | 118-762 |
Cow position: | chrX:14181588-14180941 (view UCSC Genome Browser custom track) |
Alignm length: | 649 |
Alignm identity: | 384 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 159, 142 |
Conread position: | 127-748 |
Cow position: | chrX:29045281-29044657 (view UCSC Genome Browser custom track) |
Alignm length: | 628 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 65 |
Conread position: | 128-773 |
Cow position: | chrX:29045361-29044716 (view UCSC Genome Browser custom track) |
Alignm length: | 652 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 228, 28 |
Conread position: | 138-520 |
Cow position: | chrX:29045837-29045452 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 244 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 65, 52 |
Conread position: | 139-773 |
Cow position: | chrX:25309713-25310350 (view UCSC Genome Browser custom track) |
Alignm length: | 640 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 261, 247 |
Conread position: | 178-784 |
Cow position: | chrX:25309668-25310277 (view UCSC Genome Browser custom track) |
Alignm length: | 614 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 36 |
Conread position: | 252-772 |
Cow position: | chrX:25325819-25325296 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 327 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 33, 20 |
Conread position: | 306-773 |
Cow position: | chrX:12627429-12627897 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 283 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 142, 74 |
Conread position: | 315-779 |
Cow position: | chrX:14181643-14181176 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 283 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 59, 66 |
Conread position: | 340-772 |
Cow position: | chrX:13826924-13826489 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 277 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 99, 278 |
Conread position: | 414-772 |
Cow position: | chrX:13826934-13826573 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 240 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 421-779 |
Cow position: | chrX:14181369-14181008 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 229 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 476-778 |
Cow position: | chrX:29045832-29045530 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 195 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 59, 54 |
Show alignments to all cow chromosomes.