Cow genome map

Conread name: Ss1.1-Pig4-TMW8035I16.3

Conread position: 1-239
Cow position: chrX:29045722-29045484 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 156
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 223, 215

Conread position: 1-327
Cow position: chrX:29044987-29044661 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 217
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 223, 215

Conread position: 1-341
Cow position: chrX:25310247-25310586 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 213
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 21, 34

Conread position: 1-428
Cow position: chrX:14181369-14180942 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 252
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 32

Conread position: 1-581
Cow position: chrX:25309995-25310578 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 286

Conread position: 1-739
Cow position: chrX:25309827-25310568 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 215

Conread position: 1-739
Cow position: chrX:25324978-25324237 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 394

Conread position: 1-772
Cow position: chrX:25325230-25324456 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 391, 387

Conread position: 1-772
Cow position: chrX:25325482-25324708 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 295

Conread position: 1-773
Cow position: chrX:29045638-29044884 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 398, 221

Conread position: 1-778
Cow position: chrX:25325062-25324280 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 21

Conread position: 1-778
Cow position: chrX:25325146-25324366 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 51

Conread position: 1-778
Cow position: chrX:25325398-25324618 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 445, 703

Conread position: 1-782
Cow position: chrX:25309743-25310527 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 189

Conread position: 2-580
Cow position: chrX:29045238-29044657 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 214

Conread position: 3-496
Cow position: chrX:29045153-29044657 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 382

Conread position: 4-418
Cow position: chrX:29045068-29044654 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 52

Conread position: 34-773
Cow position: chrX:25325701-25324959 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 122

Conread position: 34-778
Cow position: chrX:25325533-25324786 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 361

Conread position: 35-771
Cow position: chrX:25309693-25310432 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 32

Conread position: 37-660
Cow position: chrX:29045287-29044661 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 357

Conread position: 46-770
Cow position: chrX:12627339-12628062 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 454
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 93, 5

Conread position: 51-770
Cow position: chrX:29045756-29045055 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 163

Conread position: 51-796
Cow position: chrX:25325768-25325021 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 332

Conread position: 55-677
Cow position: chrX:14181567-14180942 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 378
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 49, 73

Conread position: 56-772
Cow position: chrX:25325595-25324876 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 338

Conread position: 59-773
Cow position: chrX:29045832-29045136 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 157

Conread position: 64-771
Cow position: chrX:12627271-12627979 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 422
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 59, 64

Conread position: 64-771
Cow position: chrX:13826948-13826238 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 410
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 51, 55

Conread position: 118-762
Cow position: chrX:14181588-14180941 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 384
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 159, 142

Conread position: 127-748
Cow position: chrX:29045281-29044657 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 65

Conread position: 128-773
Cow position: chrX:29045361-29044716 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 28

Conread position: 138-520
Cow position: chrX:29045837-29045452 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 244
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 65, 52

Conread position: 139-773
Cow position: chrX:25309713-25310350 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 247

Conread position: 178-784
Cow position: chrX:25309668-25310277 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 36

Conread position: 252-772
Cow position: chrX:25325819-25325296 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 327
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 20

Conread position: 306-773
Cow position: chrX:12627429-12627897 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 283
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 142, 74

Conread position: 315-779
Cow position: chrX:14181643-14181176 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 283
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 66

Conread position: 340-772
Cow position: chrX:13826924-13826489 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 277
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 99, 278

Conread position: 414-772
Cow position: chrX:13826934-13826573 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 240
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 0

Conread position: 421-779
Cow position: chrX:14181369-14181008 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 229
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 476-778
Cow position: chrX:29045832-29045530 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 59, 54

Show alignments to all cow chromosomes.